RNA–Protein interactions for RNA: ENST00000441457.1

LINC01520-201, Transcript of long intergenic non-protein coding RNA 1520, humanhuman

TSL 1 (best) BASIC

Gene LINC01520, Length 1,487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01520-201ENST00000441457 AEBP2Q6ZN18 517 aaPredicted RBP29.01■■■□□ 2.23
LINC01520-201ENST00000441457 CHIC1Q5VXU3 224 aa28.12■■■□□ 2.09
LINC01520-201ENST00000441457 SENP3Q9H4L4 574 aaPredicted RBP24.7■■□□□ 1.54
LINC01520-201ENST00000441457 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
LINC01520-201ENST00000441457 FOXD1Q16676 465 aa22.92■■□□□ 1.26
LINC01520-201ENST00000441457 PLPPR3Q6T4P5 718 aa22.76■■□□□ 1.23
LINC01520-201ENST00000441457 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
LINC01520-201ENST00000441457 ADRA2BP18089 450 aa21.85■■□□□ 1.09
LINC01520-201ENST00000441457 PIAS4Q8N2W9 510 aaPredicted RBP21.61■■□□□ 1.05
LINC01520-201ENST00000441457 MSH5O43196 834 aa21.26■□□□□ 0.99
LINC01520-201ENST00000441457 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
LINC01520-201ENST00000441457 PPP4R3CPQ6ZMV5 832 aa20.01■□□□□ 0.79
LINC01520-201ENST00000441457 MAPK8IP2Q13387 824 aaPredicted RBP19.89■□□□□ 0.77
LINC01520-201ENST00000441457 POTEDQ86YR6 584 aa19.75■□□□□ 0.75
LINC01520-201ENST00000441457 DMRT2Q9Y5R5 561 aa19.64■□□□□ 0.73
LINC01520-201ENST00000441457 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
LINC01520-201ENST00000441457 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
LINC01520-201ENST00000441457 KCNA4P22459 653 aa19.28■□□□□ 0.68
LINC01520-201ENST00000441457 RNF216Q9NWF9 866 aaPredicted RBP19.17■□□□□ 0.66
LINC01520-201ENST00000441457 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
LINC01520-201ENST00000441457 NPM3O75607 178 aaKnown RBP19.13■□□□□ 0.65
LINC01520-201ENST00000441457 DCAF8L1A6NGE4 600 aa18.91■□□□□ 0.62
LINC01520-201ENST00000441457 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.56
LINC01520-201ENST00000441457 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
LINC01520-201ENST00000441457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.31■□□□□ 0.52
LINC01520-201ENST00000441457 RNF39Q9H2S5 420 aa18.17■□□□□ 0.5
LINC01520-201ENST00000441457 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
LINC01520-201ENST00000441457 C1QBPQ07021 282 aaKnown RBP17.95■□□□□ 0.46
LINC01520-201ENST00000441457 U3KPZ7 1027 aaPredicted RBP17.95■□□□□ 0.46
LINC01520-201ENST00000441457 CACNB1Q02641 598 aaPredicted RBP17.92■□□□□ 0.46
LINC01520-201ENST00000441457 FOXD4L1Q9NU39 408 aa17.83■□□□□ 0.45
LINC01520-201ENST00000441457 ZBTB22O15209 634 aa17.72■□□□□ 0.43
LINC01520-201ENST00000441457 MYCNP04198 464 aaPredicted RBP17.7■□□□□ 0.42
LINC01520-201ENST00000441457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
LINC01520-201ENST00000441457 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
LINC01520-201ENST00000441457 SAMD1Q6SPF0 538 aaPredicted RBP17.59■□□□□ 0.41
LINC01520-201ENST00000441457 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
LINC01520-201ENST00000441457 APLP2Q06481 763 aa17.56■□□□□ 0.4
LINC01520-201ENST00000441457 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
LINC01520-201ENST00000441457 CAPN15O75808 1086 aa17.51■□□□□ 0.39
LINC01520-201ENST00000441457 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
LINC01520-201ENST00000441457 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
LINC01520-201ENST00000441457 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
LINC01520-201ENST00000441457 DSG3P32926 999 aa17.22■□□□□ 0.35
LINC01520-201ENST00000441457 ATF5Q9Y2D1 282 aaPredicted RBP17.22■□□□□ 0.35
LINC01520-201ENST00000441457 ATXN8OSP0DMR3 200 aa17.19■□□□□ 0.34
LINC01520-201ENST00000441457 ABCB7O75027 752 aa17.15■□□□□ 0.34
LINC01520-201ENST00000441457 POLA2Q14181 598 aa16.99■□□□□ 0.31
LINC01520-201ENST00000441457 ZBTB12Q9Y330 459 aaPredicted RBP16.71■□□□□ 0.27
LINC01520-201ENST00000441457 FBLN2P98095 1184 aa16.56■□□□□ 0.24
LINC01520-201ENST00000441457 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
LINC01520-201ENST00000441457 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
LINC01520-201ENST00000441457 RBM42Q9BTD8 480 aaKnown RBP16.45■□□□□ 0.22
LINC01520-201ENST00000441457 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
LINC01520-201ENST00000441457 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
LINC01520-201ENST00000441457 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
LINC01520-201ENST00000441457 AKT1S1Q96B36 256 aa16.17■□□□□ 0.18
LINC01520-201ENST00000441457 ZNF692Q9BU19 519 aaPredicted RBP16.15■□□□□ 0.18
LINC01520-201ENST00000441457 SSUH2Q9Y2M2 353 aa16.05■□□□□ 0.16
LINC01520-201ENST00000441457 SPDYE4A6NLX3 237 aa16.01■□□□□ 0.15
LINC01520-201ENST00000441457 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
LINC01520-201ENST00000441457 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC01520-201ENST00000441457 PITPNM1O00562 1244 aa15.84■□□□□ 0.13
LINC01520-201ENST00000441457 CHRDL2Q6WN34 429 aa15.84■□□□□ 0.13
LINC01520-201ENST00000441457 FKBP8Q14318 412 aa15.83■□□□□ 0.12
LINC01520-201ENST00000441457 SPDYE1Q8NFV5 336 aaPredicted RBP15.82■□□□□ 0.12
LINC01520-201ENST00000441457 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
LINC01520-201ENST00000441457 PROM2Q8N271 834 aa15.65■□□□□ 0.1
LINC01520-201ENST00000441457 POTEHQ6S545 545 aa15.62■□□□□ 0.09
LINC01520-201ENST00000441457 STAG3Q9UJ98 1225 aa15.61■□□□□ 0.09
LINC01520-201ENST00000441457 PRR29P0C7W0 189 aa15.6■□□□□ 0.09
LINC01520-201ENST00000441457 PIP4P2Q8N4L2 257 aa15.58■□□□□ 0.08
LINC01520-201ENST00000441457 FXR2P51116 673 aaKnown RBP eCLIP15.56■□□□□ 0.08
LINC01520-201ENST00000441457 PRKAR2AP13861 404 aaKnown RBP15.46■□□□□ 0.06
LINC01520-201ENST00000441457 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
LINC01520-201ENST00000441457 FBXO3Q9UK99 471 aa15.32■□□□□ 0.04
LINC01520-201ENST00000441457 CREBZFQ9NS37 354 aa15.3■□□□□ 0.04
LINC01520-201ENST00000441457 MIER1Q8N108 512 aa15.22■□□□□ 0.03
LINC01520-201ENST00000441457 FARP1Q9Y4F1 1045 aaPredicted RBP15.22■□□□□ 0.03
LINC01520-201ENST00000441457 PLEKHG5O94827 1062 aa15.21■□□□□ 0.03
LINC01520-201ENST00000441457 PLCD3Q8N3E9 789 aa15.2■□□□□ 0.02
LINC01520-201ENST00000441457 HAX1O00165 279 aa15.19■□□□□ 0.02
LINC01520-201ENST00000441457 VASPP50552 380 aaPredicted RBP15.11■□□□□ 0.01
LINC01520-201ENST00000441457 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
LINC01520-201ENST00000441457 NPM1P06748 294 aaKnown RBP eCLIP15.08■□□□□ 0.01
LINC01520-201ENST00000441457 C19orf67A6NJJ6 358 aa15.04■□□□□ -0
LINC01520-201ENST00000441457 ZBTB47Q9UFB7 747 aaPredicted RBP15.03■□□□□ -0
LINC01520-201ENST00000441457 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
LINC01520-201ENST00000441457 EVX2Q03828 476 aa14.97□□□□□ -0.01
LINC01520-201ENST00000441457 KLHL34Q8N239 644 aa14.95□□□□□ -0.02
LINC01520-201ENST00000441457 PAK3O75914 559 aaPredicted RBP14.93□□□□□ -0.02
LINC01520-201ENST00000441457 SP7Q8TDD2 431 aaPredicted RBP14.91□□□□□ -0.02
LINC01520-201ENST00000441457 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
LINC01520-201ENST00000441457 IFNLR1Q8IU57 520 aaPredicted RBP14.86□□□□□ -0.03
LINC01520-201ENST00000441457 TSPYL2Q9H2G4 693 aaPredicted RBP14.84□□□□□ -0.03
LINC01520-201ENST00000441457 RASEFQ8IZ41 740 aa14.83□□□□□ -0.03
LINC01520-201ENST00000441457 NUBP1P53384 320 aa14.81□□□□□ -0.04
LINC01520-201ENST00000441457 ZNF579Q8NAF0 562 aaKnown RBP14.77□□□□□ -0.04
LINC01520-201ENST00000441457 FAM212AQ96EL1 285 aa14.76□□□□□ -0.05
LINC01520-201ENST00000441457 SPOCK2Q92563 424 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms