RNA–Protein interactions for RNA: ENST00000441359.1

SMIM30-204, Transcript of small integral membrane protein 30, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM30, Length 962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM30-204ENST00000441359 AEBP2Q6ZN18 517 aaPredicted RBP34.88■■■■□ 3.17
SMIM30-204ENST00000441359 CHIC1Q5VXU3 224 aa32.57■■■□□ 2.8
SMIM30-204ENST00000441359 SENP3Q9H4L4 574 aaPredicted RBP29.61■■■□□ 2.33
SMIM30-204ENST00000441359 PHF23Q9BUL5 403 aaPredicted RBP29.27■■■□□ 2.28
SMIM30-204ENST00000441359 FOXD1Q16676 465 aa27.8■■■□□ 2.04
SMIM30-204ENST00000441359 POTEDQ86YR6 584 aa26.28■■□□□ 1.8
SMIM30-204ENST00000441359 MSH5O43196 834 aa25.99■■□□□ 1.75
SMIM30-204ENST00000441359 PIAS4Q8N2W9 510 aaPredicted RBP25.85■■□□□ 1.73
SMIM30-204ENST00000441359 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
SMIM30-204ENST00000441359 PPP6R1Q9UPN7 881 aa25.74■■□□□ 1.71
SMIM30-204ENST00000441359 ADRA2BP18089 450 aa25.63■■□□□ 1.69
SMIM30-204ENST00000441359 MAPK8IP2Q13387 824 aaPredicted RBP23.71■■□□□ 1.39
SMIM30-204ENST00000441359 DMRT2Q9Y5R5 561 aa23.45■■□□□ 1.34
SMIM30-204ENST00000441359 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
SMIM30-204ENST00000441359 CACNB1Q02641 598 aaPredicted RBP22.68■■□□□ 1.22
SMIM30-204ENST00000441359 DCAF8L1A6NGE4 600 aa22.63■■□□□ 1.21
SMIM30-204ENST00000441359 PPP4R3CPQ6ZMV5 832 aa22.61■■□□□ 1.21
SMIM30-204ENST00000441359 HOXD11P31277 338 aaPredicted RBP22.4■■□□□ 1.18
SMIM30-204ENST00000441359 RNF39Q9H2S5 420 aa22.23■■□□□ 1.15
SMIM30-204ENST00000441359 CNKSR2Q8WXI2 1034 aa22.2■■□□□ 1.14
SMIM30-204ENST00000441359 RNF216Q9NWF9 866 aaPredicted RBP22.09■■□□□ 1.13
SMIM30-204ENST00000441359 C1QBPQ07021 282 aaKnown RBP21.78■■□□□ 1.08
SMIM30-204ENST00000441359 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
SMIM30-204ENST00000441359 NCBP3Q53F19 620 aaKnown RBP21.46■■□□□ 1.03
SMIM30-204ENST00000441359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.39■■□□□ 1.01
SMIM30-204ENST00000441359 NPM3O75607 178 aaKnown RBP21.33■■□□□ 1.01
SMIM30-204ENST00000441359 U3KPZ7 1027 aaPredicted RBP20.95■□□□□ 0.94
SMIM30-204ENST00000441359 SPINK5Q9NQ38 1064 aaPredicted RBP20.84■□□□□ 0.93
SMIM30-204ENST00000441359 CAPN15O75808 1086 aa20.74■□□□□ 0.91
SMIM30-204ENST00000441359 DSG3P32926 999 aa20.71■□□□□ 0.91
SMIM30-204ENST00000441359 KCNA4P22459 653 aa20.61■□□□□ 0.89
SMIM30-204ENST00000441359 SLC4A2P04920 1241 aa20.52■□□□□ 0.88
SMIM30-204ENST00000441359 POTEHQ6S545 545 aa20.47■□□□□ 0.87
SMIM30-204ENST00000441359 TRHP20396 242 aaPredicted RBP20.35■□□□□ 0.85
SMIM30-204ENST00000441359 ABCB7O75027 752 aa20.33■□□□□ 0.85
SMIM30-204ENST00000441359 ZNF219Q9P2Y4 722 aaPredicted RBP20.12■□□□□ 0.81
SMIM30-204ENST00000441359 APLP2Q06481 763 aa20.04■□□□□ 0.8
SMIM30-204ENST00000441359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.96■□□□□ 0.79
SMIM30-204ENST00000441359 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
SMIM30-204ENST00000441359 SAMD1Q6SPF0 538 aaPredicted RBP19.89■□□□□ 0.77
SMIM30-204ENST00000441359 POLA2Q14181 598 aa19.66■□□□□ 0.74
SMIM30-204ENST00000441359 MYCNP04198 464 aaPredicted RBP19.64■□□□□ 0.73
SMIM30-204ENST00000441359 RBM42Q9BTD8 480 aaKnown RBP19.61■□□□□ 0.73
SMIM30-204ENST00000441359 CHRDL2Q6WN34 429 aa19.49■□□□□ 0.71
SMIM30-204ENST00000441359 ATF5Q9Y2D1 282 aaPredicted RBP19.44■□□□□ 0.7
SMIM30-204ENST00000441359 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
SMIM30-204ENST00000441359 FOXD4L1Q9NU39 408 aa19.24■□□□□ 0.67
SMIM30-204ENST00000441359 AKT1S1Q96B36 256 aa19.12■□□□□ 0.65
SMIM30-204ENST00000441359 OSCARQ8IYS5 282 aa19.11■□□□□ 0.65
SMIM30-204ENST00000441359 REM2Q8IYK8 340 aaPredicted RBP19.04■□□□□ 0.64
SMIM30-204ENST00000441359 ZBTB12Q9Y330 459 aaPredicted RBP19.02■□□□□ 0.64
SMIM30-204ENST00000441359 ZBTB22O15209 634 aa19■□□□□ 0.63
SMIM30-204ENST00000441359 PIP4P2Q8N4L2 257 aa18.97■□□□□ 0.63
SMIM30-204ENST00000441359 SP7Q8TDD2 431 aaPredicted RBP18.97■□□□□ 0.63
SMIM30-204ENST00000441359 PITPNM1O00562 1244 aa18.88■□□□□ 0.61
SMIM30-204ENST00000441359 HAX1O00165 279 aa18.73■□□□□ 0.59
SMIM30-204ENST00000441359 FXR2P51116 673 aaKnown RBP eCLIP18.73■□□□□ 0.59
SMIM30-204ENST00000441359 EVX2Q03828 476 aa18.6■□□□□ 0.57
SMIM30-204ENST00000441359 ATXN8OSP0DMR3 200 aa18.55■□□□□ 0.56
SMIM30-204ENST00000441359 SPDYE2BA6NHP3 402 aa18.49■□□□□ 0.55
SMIM30-204ENST00000441359 SPDYE6P0CI01 402 aa18.49■□□□□ 0.55
SMIM30-204ENST00000441359 SPDYE2Q495Y8 402 aa18.49■□□□□ 0.55
SMIM30-204ENST00000441359 FBLN2P98095 1184 aa18.46■□□□□ 0.55
SMIM30-204ENST00000441359 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
SMIM30-204ENST00000441359 CLEC11AQ9Y240 323 aa18.41■□□□□ 0.54
SMIM30-204ENST00000441359 PRKAR2AP13861 404 aaKnown RBP18.37■□□□□ 0.53
SMIM30-204ENST00000441359 SPDYE1Q8NFV5 336 aaPredicted RBP18.27■□□□□ 0.52
SMIM30-204ENST00000441359 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.52
SMIM30-204ENST00000441359 SSUH2Q9Y2M2 353 aa18.25■□□□□ 0.51
SMIM30-204ENST00000441359 CHADLQ6NUI6 762 aa18.18■□□□□ 0.5
SMIM30-204ENST00000441359 C19orf67A6NJJ6 358 aa18.16■□□□□ 0.5
SMIM30-204ENST00000441359 GABBR2O75899 941 aa18.04■□□□□ 0.48
SMIM30-204ENST00000441359 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMIM30-204ENST00000441359 PRR29P0C7W0 189 aa17.96■□□□□ 0.47
SMIM30-204ENST00000441359 LHX8Q68G74 356 aa17.8■□□□□ 0.44
SMIM30-204ENST00000441359 CD44P16070 742 aaKnown RBP17.75■□□□□ 0.43
SMIM30-204ENST00000441359 POTEIP0CG38 1075 aa17.73■□□□□ 0.43
SMIM30-204ENST00000441359 FARP1Q9Y4F1 1045 aaPredicted RBP17.73■□□□□ 0.43
SMIM30-204ENST00000441359 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
SMIM30-204ENST00000441359 CREBZFQ9NS37 354 aa17.48■□□□□ 0.39
SMIM30-204ENST00000441359 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
SMIM30-204ENST00000441359 ZNF579Q8NAF0 562 aaKnown RBP17.4■□□□□ 0.38
SMIM30-204ENST00000441359 DCBLD2Q96PD2 775 aa17.4■□□□□ 0.38
SMIM30-204ENST00000441359 GALR2O43603 387 aaPredicted RBP17.34■□□□□ 0.37
SMIM30-204ENST00000441359 CLCN6P51797 869 aa17.3■□□□□ 0.36
SMIM30-204ENST00000441359 SPDYE4A6NLX3 237 aa17.28■□□□□ 0.36
SMIM30-204ENST00000441359 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
SMIM30-204ENST00000441359 STAG3Q9UJ98 1225 aa17.26■□□□□ 0.35
SMIM30-204ENST00000441359 PHF12Q96QT6 1004 aa17.25■□□□□ 0.35
SMIM30-204ENST00000441359 POTEB2H3BUK9 544 aa17.17■□□□□ 0.34
SMIM30-204ENST00000441359 MNX1P50219 401 aaPredicted RBP17.12■□□□□ 0.33
SMIM30-204ENST00000441359 OTUD5Q96G74 571 aa17.11■□□□□ 0.33
SMIM30-204ENST00000441359 PLSCR2Q9NRY7 297 aa17.1■□□□□ 0.33
SMIM30-204ENST00000441359 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.32
SMIM30-204ENST00000441359 PELP1Q8IZL8 1130 aaKnown RBP17.08■□□□□ 0.32
SMIM30-204ENST00000441359 NPM1P06748 294 aaKnown RBP eCLIP16.99■□□□□ 0.31
SMIM30-204ENST00000441359 MS4A3Q96HJ5 214 aa16.97■□□□□ 0.31
SMIM30-204ENST00000441359 TSPYL2Q9H2G4 693 aaPredicted RBP16.86■□□□□ 0.29
SMIM30-204ENST00000441359 POTEJP0CG39 1038 aa16.85■□□□□ 0.29
SMIM30-204ENST00000441359 METRNQ9UJH8 293 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms