RNA–Protein interactions for RNA: ENST00000441134.5

GARNL3-207, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-207ENST00000441134 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
GARNL3-207ENST00000441134 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
GARNL3-207ENST00000441134 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
GARNL3-207ENST00000441134 PHF23Q9BUL5 403 aaPredicted RBP17.01■□□□□ 0.31
GARNL3-207ENST00000441134 FOXD1Q16676 465 aa16.03■□□□□ 0.16
GARNL3-207ENST00000441134 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
GARNL3-207ENST00000441134 PIAS4Q8N2W9 510 aaPredicted RBP15.03■□□□□ -0
GARNL3-207ENST00000441134 MSH5O43196 834 aa15.02■□□□□ -0
GARNL3-207ENST00000441134 PPP6R1Q9UPN7 881 aa15.02■□□□□ -0
GARNL3-207ENST00000441134 ADRA2BP18089 450 aa14.99□□□□□ -0.01
GARNL3-207ENST00000441134 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
GARNL3-207ENST00000441134 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
GARNL3-207ENST00000441134 MAPK8IP2Q13387 824 aaPredicted RBP13.74□□□□□ -0.21
GARNL3-207ENST00000441134 DMRT2Q9Y5R5 561 aa13.67□□□□□ -0.22
GARNL3-207ENST00000441134 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
GARNL3-207ENST00000441134 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
GARNL3-207ENST00000441134 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
GARNL3-207ENST00000441134 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
GARNL3-207ENST00000441134 RNF216Q9NWF9 866 aaPredicted RBP13.13□□□□□ -0.31
GARNL3-207ENST00000441134 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
GARNL3-207ENST00000441134 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-207ENST00000441134 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
GARNL3-207ENST00000441134 RNF39Q9H2S5 420 aa12.8□□□□□ -0.36
GARNL3-207ENST00000441134 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
GARNL3-207ENST00000441134 KCNA4P22459 653 aa12.64□□□□□ -0.39
GARNL3-207ENST00000441134 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
GARNL3-207ENST00000441134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.6□□□□□ -0.39
GARNL3-207ENST00000441134 U3KPZ7 1027 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-207ENST00000441134 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
GARNL3-207ENST00000441134 CAPN15O75808 1086 aa12.11□□□□□ -0.47
GARNL3-207ENST00000441134 SPINK5Q9NQ38 1064 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-207ENST00000441134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-207ENST00000441134 APLP2Q06481 763 aa12.04□□□□□ -0.48
GARNL3-207ENST00000441134 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
GARNL3-207ENST00000441134 DSG3P32926 999 aa12□□□□□ -0.49
GARNL3-207ENST00000441134 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
GARNL3-207ENST00000441134 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
GARNL3-207ENST00000441134 ZNF219Q9P2Y4 722 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-207ENST00000441134 TRHP20396 242 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-207ENST00000441134 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
GARNL3-207ENST00000441134 ABCB7O75027 752 aa11.83□□□□□ -0.52
GARNL3-207ENST00000441134 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
GARNL3-207ENST00000441134 POLA2Q14181 598 aa11.61□□□□□ -0.55
GARNL3-207ENST00000441134 ZBTB22O15209 634 aa11.6□□□□□ -0.55
GARNL3-207ENST00000441134 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
GARNL3-207ENST00000441134 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
GARNL3-207ENST00000441134 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
GARNL3-207ENST00000441134 ZBTB12Q9Y330 459 aaPredicted RBP11.43□□□□□ -0.58
GARNL3-207ENST00000441134 POTEHQ6S545 545 aa11.4□□□□□ -0.58
GARNL3-207ENST00000441134 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
GARNL3-207ENST00000441134 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
GARNL3-207ENST00000441134 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
GARNL3-207ENST00000441134 FBLN2P98095 1184 aa11.18□□□□□ -0.62
GARNL3-207ENST00000441134 CSRNP3Q8WYN3 585 aa11.14□□□□□ -0.63
GARNL3-207ENST00000441134 REM2Q8IYK8 340 aaPredicted RBP11.1□□□□□ -0.63
GARNL3-207ENST00000441134 SPDYE2BA6NHP3 402 aa11.06□□□□□ -0.64
GARNL3-207ENST00000441134 SPDYE6P0CI01 402 aa11.06□□□□□ -0.64
GARNL3-207ENST00000441134 SPDYE2Q495Y8 402 aa11.06□□□□□ -0.64
GARNL3-207ENST00000441134 EHMT2Q96KQ7 1210 aa11.06□□□□□ -0.64
GARNL3-207ENST00000441134 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-207ENST00000441134 PITPNM1O00562 1244 aa10.99□□□□□ -0.65
GARNL3-207ENST00000441134 PIP4P2Q8N4L2 257 aa10.93□□□□□ -0.66
GARNL3-207ENST00000441134 ZNF692Q9BU19 519 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-207ENST00000441134 SSUH2Q9Y2M2 353 aa10.9□□□□□ -0.66
GARNL3-207ENST00000441134 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
GARNL3-207ENST00000441134 SPDYE1Q8NFV5 336 aaPredicted RBP10.86□□□□□ -0.67
GARNL3-207ENST00000441134 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
GARNL3-207ENST00000441134 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
GARNL3-207ENST00000441134 HAX1O00165 279 aa10.73□□□□□ -0.69
GARNL3-207ENST00000441134 SP7Q8TDD2 431 aaPredicted RBP10.72□□□□□ -0.69
GARNL3-207ENST00000441134 PRKAR2AP13861 404 aaKnown RBP10.71□□□□□ -0.69
GARNL3-207ENST00000441134 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
GARNL3-207ENST00000441134 SPDYE4A6NLX3 237 aa10.59□□□□□ -0.71
GARNL3-207ENST00000441134 CHADLQ6NUI6 762 aa10.59□□□□□ -0.71
GARNL3-207ENST00000441134 EVX2Q03828 476 aa10.55□□□□□ -0.72
GARNL3-207ENST00000441134 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
GARNL3-207ENST00000441134 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
GARNL3-207ENST00000441134 FARP1Q9Y4F1 1045 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-207ENST00000441134 CREBZFQ9NS37 354 aa10.39□□□□□ -0.75
GARNL3-207ENST00000441134 CD44P16070 742 aaKnown RBP10.38□□□□□ -0.75
GARNL3-207ENST00000441134 GABBR2O75899 941 aa10.35□□□□□ -0.75
GARNL3-207ENST00000441134 PROM2Q8N271 834 aa10.33□□□□□ -0.76
GARNL3-207ENST00000441134 CLCN6P51797 869 aa10.25□□□□□ -0.77
GARNL3-207ENST00000441134 ZRANB1Q9UGI0 708 aa10.25□□□□□ -0.77
GARNL3-207ENST00000441134 NPM1P06748 294 aaKnown RBP eCLIP10.24□□□□□ -0.77
GARNL3-207ENST00000441134 ZNF579Q8NAF0 562 aaKnown RBP10.23□□□□□ -0.77
GARNL3-207ENST00000441134 PAK3O75914 559 aaPredicted RBP10.21□□□□□ -0.77
GARNL3-207ENST00000441134 MNX1P50219 401 aaPredicted RBP10.21□□□□□ -0.77
GARNL3-207ENST00000441134 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
GARNL3-207ENST00000441134 FKBP8Q14318 412 aa10.13□□□□□ -0.79
GARNL3-207ENST00000441134 DCBLD2Q96PD2 775 aa10.12□□□□□ -0.79
GARNL3-207ENST00000441134 POTEIP0CG38 1075 aa10.11□□□□□ -0.79
GARNL3-207ENST00000441134 MIER1Q8N108 512 aa10.1□□□□□ -0.79
GARNL3-207ENST00000441134 PHF12Q96QT6 1004 aa10.1□□□□□ -0.79
GARNL3-207ENST00000441134 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
GARNL3-207ENST00000441134 LHX8Q68G74 356 aa10.05□□□□□ -0.8
GARNL3-207ENST00000441134 PLCD3Q8N3E9 789 aa10.04□□□□□ -0.8
GARNL3-207ENST00000441134 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
GARNL3-207ENST00000441134 ZBTB47Q9UFB7 747 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-207ENST00000441134 CCDC61Q9Y6R9 512 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms