RNA–Protein interactions for RNA: ENST00000440946.5

BMS1P22-202, Transcript of BMS1, ribosome biogenesis factor pseudogene 22, humanhuman

TSL 1 (best) BASIC

Gene BMS1P22, Length 1,160 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMS1P22-202ENST00000440946 AEBP2Q6ZN18 517 aaPredicted RBP28.44■■■□□ 2.14
BMS1P22-202ENST00000440946 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
BMS1P22-202ENST00000440946 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
BMS1P22-202ENST00000440946 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
BMS1P22-202ENST00000440946 FOXD1Q16676 465 aa22.61■■□□□ 1.21
BMS1P22-202ENST00000440946 PLPPR3Q6T4P5 718 aa21.19■□□□□ 0.98
BMS1P22-202ENST00000440946 MSH5O43196 834 aa21.12■□□□□ 0.97
BMS1P22-202ENST00000440946 POTEDQ86YR6 584 aa21.06■□□□□ 0.96
BMS1P22-202ENST00000440946 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
BMS1P22-202ENST00000440946 PIAS4Q8N2W9 510 aaPredicted RBP21.02■□□□□ 0.96
BMS1P22-202ENST00000440946 ADRA2BP18089 450 aa20.92■□□□□ 0.94
BMS1P22-202ENST00000440946 MAPK8IP2Q13387 824 aaPredicted RBP19.3■□□□□ 0.68
BMS1P22-202ENST00000440946 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
BMS1P22-202ENST00000440946 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
BMS1P22-202ENST00000440946 PPP4R3CPQ6ZMV5 832 aa18.59■□□□□ 0.57
BMS1P22-202ENST00000440946 HOXD11P31277 338 aaPredicted RBP18.38■□□□□ 0.53
BMS1P22-202ENST00000440946 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
BMS1P22-202ENST00000440946 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
BMS1P22-202ENST00000440946 CNKSR2Q8WXI2 1034 aa18.25■□□□□ 0.51
BMS1P22-202ENST00000440946 RNF216Q9NWF9 866 aaPredicted RBP18.15■□□□□ 0.5
BMS1P22-202ENST00000440946 RNF39Q9H2S5 420 aa18.08■□□□□ 0.48
BMS1P22-202ENST00000440946 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
BMS1P22-202ENST00000440946 C1QBPQ07021 282 aaKnown RBP17.73■□□□□ 0.43
BMS1P22-202ENST00000440946 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
BMS1P22-202ENST00000440946 KCNA4P22459 653 aa17.65■□□□□ 0.42
BMS1P22-202ENST00000440946 NPM3O75607 178 aaKnown RBP17.6■□□□□ 0.41
BMS1P22-202ENST00000440946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
BMS1P22-202ENST00000440946 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
BMS1P22-202ENST00000440946 SPINK5Q9NQ38 1064 aaPredicted RBP16.97■□□□□ 0.31
BMS1P22-202ENST00000440946 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
BMS1P22-202ENST00000440946 DSG3P32926 999 aa16.87■□□□□ 0.29
BMS1P22-202ENST00000440946 CAPN15O75808 1086 aa16.85■□□□□ 0.29
BMS1P22-202ENST00000440946 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
BMS1P22-202ENST00000440946 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
BMS1P22-202ENST00000440946 ABCB7O75027 752 aa16.51■□□□□ 0.23
BMS1P22-202ENST00000440946 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
BMS1P22-202ENST00000440946 APLP2Q06481 763 aa16.44■□□□□ 0.22
BMS1P22-202ENST00000440946 POTEHQ6S545 545 aa16.43■□□□□ 0.22
BMS1P22-202ENST00000440946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
BMS1P22-202ENST00000440946 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
BMS1P22-202ENST00000440946 SAMD1Q6SPF0 538 aaPredicted RBP16.36■□□□□ 0.21
BMS1P22-202ENST00000440946 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
BMS1P22-202ENST00000440946 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
BMS1P22-202ENST00000440946 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
BMS1P22-202ENST00000440946 ZBTB22O15209 634 aa16.19■□□□□ 0.18
BMS1P22-202ENST00000440946 POLA2Q14181 598 aa16.07■□□□□ 0.16
BMS1P22-202ENST00000440946 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
BMS1P22-202ENST00000440946 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
BMS1P22-202ENST00000440946 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
BMS1P22-202ENST00000440946 CHRDL2Q6WN34 429 aa15.79■□□□□ 0.12
BMS1P22-202ENST00000440946 ATXN8OSP0DMR3 200 aa15.72■□□□□ 0.11
BMS1P22-202ENST00000440946 ZBTB12Q9Y330 459 aaPredicted RBP15.64■□□□□ 0.09
BMS1P22-202ENST00000440946 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
BMS1P22-202ENST00000440946 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
BMS1P22-202ENST00000440946 REM2Q8IYK8 340 aaPredicted RBP15.52■□□□□ 0.08
BMS1P22-202ENST00000440946 PIP4P2Q8N4L2 257 aa15.41■□□□□ 0.06
BMS1P22-202ENST00000440946 PITPNM1O00562 1244 aa15.39■□□□□ 0.05
BMS1P22-202ENST00000440946 SP7Q8TDD2 431 aaPredicted RBP15.3■□□□□ 0.04
BMS1P22-202ENST00000440946 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
BMS1P22-202ENST00000440946 MKRN4PQ13434 485 aaPredicted RBP15.23■□□□□ 0.03
BMS1P22-202ENST00000440946 SPDYE2BA6NHP3 402 aa15.19■□□□□ 0.02
BMS1P22-202ENST00000440946 SPDYE6P0CI01 402 aa15.19■□□□□ 0.02
BMS1P22-202ENST00000440946 SPDYE2Q495Y8 402 aa15.19■□□□□ 0.02
BMS1P22-202ENST00000440946 FBLN2P98095 1184 aa15.18■□□□□ 0.02
BMS1P22-202ENST00000440946 HAX1O00165 279 aa15.1■□□□□ 0.01
BMS1P22-202ENST00000440946 EVX2Q03828 476 aa15.05■□□□□ -0
BMS1P22-202ENST00000440946 SSUH2Q9Y2M2 353 aa15.04■□□□□ -0
BMS1P22-202ENST00000440946 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
BMS1P22-202ENST00000440946 SPDYE1Q8NFV5 336 aaPredicted RBP14.96□□□□□ -0.01
BMS1P22-202ENST00000440946 CLEC11AQ9Y240 323 aa14.96□□□□□ -0.01
BMS1P22-202ENST00000440946 PRKAR2AP13861 404 aaKnown RBP14.94□□□□□ -0.02
BMS1P22-202ENST00000440946 C19orf67A6NJJ6 358 aa14.8□□□□□ -0.04
BMS1P22-202ENST00000440946 CHADLQ6NUI6 762 aa14.78□□□□□ -0.04
BMS1P22-202ENST00000440946 PABPN1Q86U42 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
BMS1P22-202ENST00000440946 PRR29P0C7W0 189 aa14.66□□□□□ -0.06
BMS1P22-202ENST00000440946 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
BMS1P22-202ENST00000440946 GABBR2O75899 941 aa14.62□□□□□ -0.07
BMS1P22-202ENST00000440946 FKBP8Q14318 412 aa14.59□□□□□ -0.07
BMS1P22-202ENST00000440946 FARP1Q9Y4F1 1045 aaPredicted RBP14.5□□□□□ -0.09
BMS1P22-202ENST00000440946 CD44P16070 742 aaKnown RBP14.45□□□□□ -0.1
BMS1P22-202ENST00000440946 POTEIP0CG38 1075 aa14.39□□□□□ -0.11
BMS1P22-202ENST00000440946 CREBZFQ9NS37 354 aa14.36□□□□□ -0.11
BMS1P22-202ENST00000440946 LHX8Q68G74 356 aa14.33□□□□□ -0.12
BMS1P22-202ENST00000440946 PROM2Q8N271 834 aa14.29□□□□□ -0.12
BMS1P22-202ENST00000440946 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
BMS1P22-202ENST00000440946 STAG3Q9UJ98 1225 aa14.24□□□□□ -0.13
BMS1P22-202ENST00000440946 ZRANB1Q9UGI0 708 aa14.21□□□□□ -0.13
BMS1P22-202ENST00000440946 CLCN6P51797 869 aa14.17□□□□□ -0.14
BMS1P22-202ENST00000440946 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
BMS1P22-202ENST00000440946 GALR2O43603 387 aaPredicted RBP14.12□□□□□ -0.15
BMS1P22-202ENST00000440946 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
BMS1P22-202ENST00000440946 DCBLD2Q96PD2 775 aa14.09□□□□□ -0.15
BMS1P22-202ENST00000440946 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
BMS1P22-202ENST00000440946 MIER1Q8N108 512 aa13.95□□□□□ -0.18
BMS1P22-202ENST00000440946 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
BMS1P22-202ENST00000440946 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
BMS1P22-202ENST00000440946 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
BMS1P22-202ENST00000440946 PLCD3Q8N3E9 789 aa13.93□□□□□ -0.18
BMS1P22-202ENST00000440946 POTEB2H3BUK9 544 aa13.92□□□□□ -0.18
BMS1P22-202ENST00000440946 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms