RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 AEBP2Q6ZN18 517 aaPredicted RBP30.26■■■□□ 2.43
LINC00354-202ENST00000440860 CHIC1Q5VXU3 224 aa29.2■■■□□ 2.26
LINC00354-202ENST00000440860 SENP3Q9H4L4 574 aaPredicted RBP25.71■■□□□ 1.71
LINC00354-202ENST00000440860 PHF23Q9BUL5 403 aaPredicted RBP25.67■■□□□ 1.7
LINC00354-202ENST00000440860 FOXD1Q16676 465 aa23.95■■□□□ 1.42
LINC00354-202ENST00000440860 PLPPR3Q6T4P5 718 aa23.57■■□□□ 1.36
LINC00354-202ENST00000440860 PPP6R1Q9UPN7 881 aa22.81■■□□□ 1.24
LINC00354-202ENST00000440860 ADRA2BP18089 450 aa22.79■■□□□ 1.24
LINC00354-202ENST00000440860 PIAS4Q8N2W9 510 aaPredicted RBP22.52■■□□□ 1.2
LINC00354-202ENST00000440860 MSH5O43196 834 aa22.18■■□□□ 1.14
LINC00354-202ENST00000440860 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
LINC00354-202ENST00000440860 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
LINC00354-202ENST00000440860 MAPK8IP2Q13387 824 aaPredicted RBP20.8■□□□□ 0.92
LINC00354-202ENST00000440860 PPP4R3CPQ6ZMV5 832 aa20.77■□□□□ 0.92
LINC00354-202ENST00000440860 DMRT2Q9Y5R5 561 aa20.46■□□□□ 0.87
LINC00354-202ENST00000440860 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
LINC00354-202ENST00000440860 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
LINC00354-202ENST00000440860 RNF216Q9NWF9 866 aaPredicted RBP19.9■□□□□ 0.78
LINC00354-202ENST00000440860 KCNA4P22459 653 aa19.89■□□□□ 0.77
LINC00354-202ENST00000440860 HOXD11P31277 338 aaPredicted RBP19.89■□□□□ 0.77
LINC00354-202ENST00000440860 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
LINC00354-202ENST00000440860 DCAF8L1A6NGE4 600 aa19.76■□□□□ 0.75
LINC00354-202ENST00000440860 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
LINC00354-202ENST00000440860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.64
LINC00354-202ENST00000440860 RNF39Q9H2S5 420 aa18.96■□□□□ 0.63
LINC00354-202ENST00000440860 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
LINC00354-202ENST00000440860 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
LINC00354-202ENST00000440860 SLC4A2P04920 1241 aa18.78■□□□□ 0.6
LINC00354-202ENST00000440860 C1QBPQ07021 282 aaKnown RBP18.73■□□□□ 0.59
LINC00354-202ENST00000440860 U3KPZ7 1027 aaPredicted RBP18.64■□□□□ 0.57
LINC00354-202ENST00000440860 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
LINC00354-202ENST00000440860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
LINC00354-202ENST00000440860 MYCNP04198 464 aaPredicted RBP18.28■□□□□ 0.52
LINC00354-202ENST00000440860 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
LINC00354-202ENST00000440860 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.52
LINC00354-202ENST00000440860 ZBTB22O15209 634 aa18.26■□□□□ 0.51
LINC00354-202ENST00000440860 CAPN15O75808 1086 aa18.26■□□□□ 0.51
LINC00354-202ENST00000440860 SAMD1Q6SPF0 538 aaPredicted RBP18.2■□□□□ 0.5
LINC00354-202ENST00000440860 APLP2Q06481 763 aa18.17■□□□□ 0.5
LINC00354-202ENST00000440860 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
LINC00354-202ENST00000440860 EHMT2Q96KQ7 1210 aa18.01■□□□□ 0.47
LINC00354-202ENST00000440860 ZNF219Q9P2Y4 722 aaPredicted RBP17.98■□□□□ 0.47
LINC00354-202ENST00000440860 DSG3P32926 999 aa17.96■□□□□ 0.47
LINC00354-202ENST00000440860 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
LINC00354-202ENST00000440860 ABCB7O75027 752 aa17.88■□□□□ 0.45
LINC00354-202ENST00000440860 ATF5Q9Y2D1 282 aaPredicted RBP17.88■□□□□ 0.45
LINC00354-202ENST00000440860 ATXN8OSP0DMR3 200 aa17.72■□□□□ 0.43
LINC00354-202ENST00000440860 POLA2Q14181 598 aa17.71■□□□□ 0.43
LINC00354-202ENST00000440860 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
LINC00354-202ENST00000440860 FBLN2P98095 1184 aa17.15■□□□□ 0.34
LINC00354-202ENST00000440860 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
LINC00354-202ENST00000440860 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
LINC00354-202ENST00000440860 MKRN4PQ13434 485 aaPredicted RBP17.05■□□□□ 0.32
LINC00354-202ENST00000440860 AKT1S1Q96B36 256 aa16.82■□□□□ 0.28
LINC00354-202ENST00000440860 SPDYE2BA6NHP3 402 aa16.81■□□□□ 0.28
LINC00354-202ENST00000440860 SPDYE6P0CI01 402 aa16.81■□□□□ 0.28
LINC00354-202ENST00000440860 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
LINC00354-202ENST00000440860 ZNF692Q9BU19 519 aaPredicted RBP16.77■□□□□ 0.28
LINC00354-202ENST00000440860 REM2Q8IYK8 340 aaPredicted RBP16.7■□□□□ 0.26
LINC00354-202ENST00000440860 SSUH2Q9Y2M2 353 aa16.61■□□□□ 0.25
LINC00354-202ENST00000440860 CHRDL2Q6WN34 429 aa16.56■□□□□ 0.24
LINC00354-202ENST00000440860 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
LINC00354-202ENST00000440860 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
LINC00354-202ENST00000440860 PITPNM1O00562 1244 aa16.49■□□□□ 0.23
LINC00354-202ENST00000440860 CLEC11AQ9Y240 323 aa16.47■□□□□ 0.23
LINC00354-202ENST00000440860 POTEHQ6S545 545 aa16.44■□□□□ 0.22
LINC00354-202ENST00000440860 SPDYE1Q8NFV5 336 aaPredicted RBP16.42■□□□□ 0.22
LINC00354-202ENST00000440860 PIP4P2Q8N4L2 257 aa16.28■□□□□ 0.2
LINC00354-202ENST00000440860 FKBP8Q14318 412 aa16.24■□□□□ 0.19
LINC00354-202ENST00000440860 PRR29P0C7W0 189 aa16.23■□□□□ 0.19
LINC00354-202ENST00000440860 FXR2P51116 673 aaKnown RBP eCLIP16.23■□□□□ 0.19
LINC00354-202ENST00000440860 STAG3Q9UJ98 1225 aa16.15■□□□□ 0.18
LINC00354-202ENST00000440860 PRKAR2AP13861 404 aaKnown RBP16.12■□□□□ 0.17
LINC00354-202ENST00000440860 PROM2Q8N271 834 aa16.09■□□□□ 0.17
LINC00354-202ENST00000440860 CHADLQ6NUI6 762 aa16.07■□□□□ 0.16
LINC00354-202ENST00000440860 HAX1O00165 279 aa15.93■□□□□ 0.14
LINC00354-202ENST00000440860 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
LINC00354-202ENST00000440860 FARP1Q9Y4F1 1045 aaPredicted RBP15.84■□□□□ 0.13
LINC00354-202ENST00000440860 MIER1Q8N108 512 aa15.79■□□□□ 0.12
LINC00354-202ENST00000440860 EVX2Q03828 476 aa15.73■□□□□ 0.11
LINC00354-202ENST00000440860 FBXO3Q9UK99 471 aa15.72■□□□□ 0.11
LINC00354-202ENST00000440860 PLCD3Q8N3E9 789 aa15.7■□□□□ 0.1
LINC00354-202ENST00000440860 C19orf67A6NJJ6 358 aa15.69■□□□□ 0.1
LINC00354-202ENST00000440860 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
LINC00354-202ENST00000440860 MNX1P50219 401 aaPredicted RBP15.65■□□□□ 0.1
LINC00354-202ENST00000440860 NPM1P06748 294 aaKnown RBP eCLIP15.64■□□□□ 0.09
LINC00354-202ENST00000440860 SP7Q8TDD2 431 aaPredicted RBP15.63■□□□□ 0.09
LINC00354-202ENST00000440860 CD44P16070 742 aaKnown RBP15.62■□□□□ 0.09
LINC00354-202ENST00000440860 ZRANB1Q9UGI0 708 aa15.52■□□□□ 0.08
LINC00354-202ENST00000440860 VASPP50552 380 aaPredicted RBP15.5■□□□□ 0.07
LINC00354-202ENST00000440860 PAK3O75914 559 aaPredicted RBP15.47■□□□□ 0.07
LINC00354-202ENST00000440860 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
LINC00354-202ENST00000440860 KLHL34Q8N239 644 aa15.43■□□□□ 0.06
LINC00354-202ENST00000440860 TSPYL2Q9H2G4 693 aaPredicted RBP15.43■□□□□ 0.06
LINC00354-202ENST00000440860 GABBR2O75899 941 aa15.39■□□□□ 0.05
LINC00354-202ENST00000440860 RASEFQ8IZ41 740 aa15.35■□□□□ 0.05
LINC00354-202ENST00000440860 ZNF579Q8NAF0 562 aaKnown RBP15.34■□□□□ 0.05
LINC00354-202ENST00000440860 NUBP1P53384 320 aa15.32■□□□□ 0.04
LINC00354-202ENST00000440860 PHF12Q96QT6 1004 aa15.31■□□□□ 0.04
LINC00354-202ENST00000440860 IFNLR1Q8IU57 520 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms