RNA–Protein interactions for RNA: ENST00000440545.1

AC007879.4-201, humanhuman

TSL 3 BASIC

Gene AC007879.4, Length 361 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.4-201ENST00000440545 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
AC007879.4-201ENST00000440545 CHIC1Q5VXU3 224 aa20.34■□□□□ 0.85
AC007879.4-201ENST00000440545 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
AC007879.4-201ENST00000440545 PHF23Q9BUL5 403 aaPredicted RBP18.34■□□□□ 0.53
AC007879.4-201ENST00000440545 FOXD1Q16676 465 aa17.42■□□□□ 0.38
AC007879.4-201ENST00000440545 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
AC007879.4-201ENST00000440545 MSH5O43196 834 aa16.39■□□□□ 0.21
AC007879.4-201ENST00000440545 PIAS4Q8N2W9 510 aaPredicted RBP16.2■□□□□ 0.18
AC007879.4-201ENST00000440545 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
AC007879.4-201ENST00000440545 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
AC007879.4-201ENST00000440545 ADRA2BP18089 450 aa15.98■□□□□ 0.15
AC007879.4-201ENST00000440545 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
AC007879.4-201ENST00000440545 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.05
AC007879.4-201ENST00000440545 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
AC007879.4-201ENST00000440545 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
AC007879.4-201ENST00000440545 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
AC007879.4-201ENST00000440545 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
AC007879.4-201ENST00000440545 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
AC007879.4-201ENST00000440545 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
AC007879.4-201ENST00000440545 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
AC007879.4-201ENST00000440545 RNF216Q9NWF9 866 aaPredicted RBP13.83□□□□□ -0.2
AC007879.4-201ENST00000440545 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
AC007879.4-201ENST00000440545 DNAJC5BQ9UF47 199 aa13.56□□□□□ -0.24
AC007879.4-201ENST00000440545 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
AC007879.4-201ENST00000440545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.4□□□□□ -0.26
AC007879.4-201ENST00000440545 NPM3O75607 178 aaKnown RBP13.25□□□□□ -0.29
AC007879.4-201ENST00000440545 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
AC007879.4-201ENST00000440545 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
AC007879.4-201ENST00000440545 CAPN15O75808 1086 aa12.99□□□□□ -0.33
AC007879.4-201ENST00000440545 DSG3P32926 999 aa12.98□□□□□ -0.33
AC007879.4-201ENST00000440545 POTEHQ6S545 545 aa12.94□□□□□ -0.34
AC007879.4-201ENST00000440545 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
AC007879.4-201ENST00000440545 KCNA4P22459 653 aa12.72□□□□□ -0.37
AC007879.4-201ENST00000440545 TRHP20396 242 aaPredicted RBP12.71□□□□□ -0.37
AC007879.4-201ENST00000440545 ABCB7O75027 752 aa12.68□□□□□ -0.38
AC007879.4-201ENST00000440545 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
AC007879.4-201ENST00000440545 APLP2Q06481 763 aa12.62□□□□□ -0.39
AC007879.4-201ENST00000440545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
AC007879.4-201ENST00000440545 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
AC007879.4-201ENST00000440545 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
AC007879.4-201ENST00000440545 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
AC007879.4-201ENST00000440545 POLA2Q14181 598 aa12.29□□□□□ -0.44
AC007879.4-201ENST00000440545 CHRDL2Q6WN34 429 aa12.26□□□□□ -0.45
AC007879.4-201ENST00000440545 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
AC007879.4-201ENST00000440545 ATF5Q9Y2D1 282 aaPredicted RBP12.04□□□□□ -0.48
AC007879.4-201ENST00000440545 AKT1S1Q96B36 256 aa12.02□□□□□ -0.49
AC007879.4-201ENST00000440545 SP7Q8TDD2 431 aaPredicted RBP11.97□□□□□ -0.49
AC007879.4-201ENST00000440545 ZBTB12Q9Y330 459 aaPredicted RBP11.95□□□□□ -0.5
AC007879.4-201ENST00000440545 FOXD4L1Q9NU39 408 aa11.94□□□□□ -0.5
AC007879.4-201ENST00000440545 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
AC007879.4-201ENST00000440545 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
AC007879.4-201ENST00000440545 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
AC007879.4-201ENST00000440545 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
AC007879.4-201ENST00000440545 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
AC007879.4-201ENST00000440545 HAX1O00165 279 aa11.79□□□□□ -0.52
AC007879.4-201ENST00000440545 FXR2P51116 673 aaKnown RBP eCLIP11.76□□□□□ -0.53
AC007879.4-201ENST00000440545 ZBTB22O15209 634 aa11.7□□□□□ -0.54
AC007879.4-201ENST00000440545 EVX2Q03828 476 aa11.64□□□□□ -0.55
AC007879.4-201ENST00000440545 ATXN8OSP0DMR3 200 aa11.58□□□□□ -0.56
AC007879.4-201ENST00000440545 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
AC007879.4-201ENST00000440545 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
AC007879.4-201ENST00000440545 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
AC007879.4-201ENST00000440545 FBLN2P98095 1184 aa11.54□□□□□ -0.56
AC007879.4-201ENST00000440545 PRKAR2AP13861 404 aaKnown RBP11.5□□□□□ -0.57
AC007879.4-201ENST00000440545 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
AC007879.4-201ENST00000440545 SPDYE1Q8NFV5 336 aaPredicted RBP11.46□□□□□ -0.57
AC007879.4-201ENST00000440545 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
AC007879.4-201ENST00000440545 ZNF692Q9BU19 519 aaPredicted RBP11.41□□□□□ -0.58
AC007879.4-201ENST00000440545 C19orf67A6NJJ6 358 aa11.39□□□□□ -0.59
AC007879.4-201ENST00000440545 SSUH2Q9Y2M2 353 aa11.38□□□□□ -0.59
AC007879.4-201ENST00000440545 CHADLQ6NUI6 762 aa11.33□□□□□ -0.6
AC007879.4-201ENST00000440545 GABBR2O75899 941 aa11.32□□□□□ -0.6
AC007879.4-201ENST00000440545 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
AC007879.4-201ENST00000440545 PABPN1Q86U42 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
AC007879.4-201ENST00000440545 LHX8Q68G74 356 aa11.23□□□□□ -0.61
AC007879.4-201ENST00000440545 CD44P16070 742 aaKnown RBP11.12□□□□□ -0.63
AC007879.4-201ENST00000440545 POTEIP0CG38 1075 aa11.09□□□□□ -0.63
AC007879.4-201ENST00000440545 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
AC007879.4-201ENST00000440545 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
AC007879.4-201ENST00000440545 CLCN6P51797 869 aa10.96□□□□□ -0.65
AC007879.4-201ENST00000440545 DCBLD2Q96PD2 775 aa10.95□□□□□ -0.66
AC007879.4-201ENST00000440545 ZNF579Q8NAF0 562 aaKnown RBP10.91□□□□□ -0.66
AC007879.4-201ENST00000440545 ZRANB1Q9UGI0 708 aa10.91□□□□□ -0.66
AC007879.4-201ENST00000440545 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
AC007879.4-201ENST00000440545 CSRNP3Q8WYN3 585 aa10.84□□□□□ -0.67
AC007879.4-201ENST00000440545 GALR2O43603 387 aaPredicted RBP10.83□□□□□ -0.68
AC007879.4-201ENST00000440545 PLSCR2Q9NRY7 297 aa10.82□□□□□ -0.68
AC007879.4-201ENST00000440545 STAG3Q9UJ98 1225 aa10.81□□□□□ -0.68
AC007879.4-201ENST00000440545 OTUD5Q96G74 571 aa10.75□□□□□ -0.69
AC007879.4-201ENST00000440545 PHF12Q96QT6 1004 aa10.75□□□□□ -0.69
AC007879.4-201ENST00000440545 SPDYE4A6NLX3 237 aa10.73□□□□□ -0.69
AC007879.4-201ENST00000440545 POTEB2H3BUK9 544 aa10.73□□□□□ -0.69
AC007879.4-201ENST00000440545 PAK3O75914 559 aaPredicted RBP10.72□□□□□ -0.69
AC007879.4-201ENST00000440545 PELP1Q8IZL8 1130 aaKnown RBP10.67□□□□□ -0.7
AC007879.4-201ENST00000440545 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
AC007879.4-201ENST00000440545 MNX1P50219 401 aaPredicted RBP10.65□□□□□ -0.7
AC007879.4-201ENST00000440545 POTEMA6NI47 508 aa10.6□□□□□ -0.71
AC007879.4-201ENST00000440545 MS4A3Q96HJ5 214 aa10.58□□□□□ -0.72
AC007879.4-201ENST00000440545 ASTLQ6HA08 431 aaPredicted RBP10.56□□□□□ -0.72
AC007879.4-201ENST00000440545 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms