RNA–Protein interactions for RNA: ENST00000440186.5

PTPN12-207, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 1 (best)

Gene PTPN12, Length 159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-207ENST00000440186 AEBP2Q6ZN18 517 aaPredicted RBP14.75□□□□□ -0.05
PTPN12-207ENST00000440186 CHIC1Q5VXU3 224 aa14.41□□□□□ -0.1
PTPN12-207ENST00000440186 PHF23Q9BUL5 403 aaPredicted RBP12.66□□□□□ -0.38
PTPN12-207ENST00000440186 SENP3Q9H4L4 574 aaPredicted RBP12.5□□□□□ -0.41
PTPN12-207ENST00000440186 PLPPR3Q6T4P5 718 aa11.69□□□□□ -0.54
PTPN12-207ENST00000440186 FOXD1Q16676 465 aa11.61□□□□□ -0.55
PTPN12-207ENST00000440186 PPP6R1Q9UPN7 881 aa11.16□□□□□ -0.62
PTPN12-207ENST00000440186 ADRA2BP18089 450 aa11.15□□□□□ -0.62
PTPN12-207ENST00000440186 PIAS4Q8N2W9 510 aaPredicted RBP10.95□□□□□ -0.66
PTPN12-207ENST00000440186 MSH5O43196 834 aa10.7□□□□□ -0.7
PTPN12-207ENST00000440186 PPP4R3CPQ6ZMV5 832 aa10.3□□□□□ -0.76
PTPN12-207ENST00000440186 SCAF1Q9H7N4 1312 aaKnown RBP10.19□□□□□ -0.78
PTPN12-207ENST00000440186 MAPK8IP2Q13387 824 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-207ENST00000440186 KCNA4P22459 653 aa10.08□□□□□ -0.8
PTPN12-207ENST00000440186 NCBP3Q53F19 620 aaKnown RBP10.03□□□□□ -0.8
PTPN12-207ENST00000440186 CNKSR2Q8WXI2 1034 aa10.01□□□□□ -0.81
PTPN12-207ENST00000440186 DMRT2Q9Y5R5 561 aa9.99□□□□□ -0.81
PTPN12-207ENST00000440186 NPM3O75607 178 aaKnown RBP9.9□□□□□ -0.82
PTPN12-207ENST00000440186 RNF216Q9NWF9 866 aaPredicted RBP9.82□□□□□ -0.84
PTPN12-207ENST00000440186 HOXD11P31277 338 aaPredicted RBP9.78□□□□□ -0.84
PTPN12-207ENST00000440186 POTEDQ86YR6 584 aa9.74□□□□□ -0.85
PTPN12-207ENST00000440186 DNAJC5BQ9UF47 199 aa9.61□□□□□ -0.87
PTPN12-207ENST00000440186 SLC4A1APQ9BWU0 796 aaKnown RBP9.6□□□□□ -0.87
PTPN12-207ENST00000440186 DCAF8L1A6NGE4 600 aa9.55□□□□□ -0.88
PTPN12-207ENST00000440186 SLC4A2P04920 1241 aa9.35□□□□□ -0.91
PTPN12-207ENST00000440186 EHMT2Q96KQ7 1210 aa9.34□□□□□ -0.91
PTPN12-207ENST00000440186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.31□□□□□ -0.924e-7■□□□□ 9.3
PTPN12-207ENST00000440186 ZBTB22O15209 634 aa9.29□□□□□ -0.92
PTPN12-207ENST00000440186 FOXD4L1Q9NU39 408 aa9.28□□□□□ -0.92
PTPN12-207ENST00000440186 CSRNP3Q8WYN3 585 aa9.22□□□□□ -0.93
PTPN12-207ENST00000440186 U3KPZ7 1027 aaPredicted RBP9.18□□□□□ -0.94
PTPN12-207ENST00000440186 RNF39Q9H2S5 420 aa9.17□□□□□ -0.94
PTPN12-207ENST00000440186 MYCNP04198 464 aaPredicted RBP9.15□□□□□ -0.94
PTPN12-207ENST00000440186 C1QBPQ07021 282 aaKnown RBP9.05□□□□□ -0.96
PTPN12-207ENST00000440186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.04□□□□□ -0.96
PTPN12-207ENST00000440186 HNRNPUL2Q1KMD3 747 aaKnown RBP9.04□□□□□ -0.96
PTPN12-207ENST00000440186 SAMD1Q6SPF0 538 aaPredicted RBP9.02□□□□□ -0.97
PTPN12-207ENST00000440186 APLP2Q06481 763 aa8.96□□□□□ -0.98
PTPN12-207ENST00000440186 ATXN8OSP0DMR3 200 aa8.94□□□□□ -0.98
PTPN12-207ENST00000440186 CACNB1Q02641 598 aaPredicted RBP8.92□□□□□ -0.98
PTPN12-207ENST00000440186 SPINK5Q9NQ38 1064 aaPredicted RBP8.92□□□□□ -0.98
PTPN12-207ENST00000440186 ATF5Q9Y2D1 282 aaPredicted RBP8.9□□□□□ -0.98
PTPN12-207ENST00000440186 CAPN15O75808 1086 aa8.87□□□□□ -0.99
PTPN12-207ENST00000440186 ZNF219Q9P2Y4 722 aaPredicted RBP8.84□□□□□ -0.99
PTPN12-207ENST00000440186 TRHP20396 242 aaPredicted RBP8.83□□□□□ -1
PTPN12-207ENST00000440186 ABCB7O75027 752 aa8.72□□□□□ -1.01
PTPN12-207ENST00000440186 DSG3P32926 999 aa8.72□□□□□ -1.01
PTPN12-207ENST00000440186 POLA2Q14181 598 aa8.68□□□□□ -1.02
PTPN12-207ENST00000440186 ZBTB12Q9Y330 459 aaPredicted RBP8.56□□□□□ -1.04
PTPN12-207ENST00000440186 FBLN2P98095 1184 aa8.53□□□□□ -1.04
PTPN12-207ENST00000440186 MKRN4PQ13434 485 aaPredicted RBP8.52□□□□□ -1.05
PTPN12-207ENST00000440186 OSCARQ8IYS5 282 aa8.42□□□□□ -1.06
PTPN12-207ENST00000440186 FKBP8Q14318 412 aa8.34□□□□□ -1.07
PTPN12-207ENST00000440186 SPDYE2BA6NHP3 402 aa8.32□□□□□ -1.08
PTPN12-207ENST00000440186 SPDYE4A6NLX3 237 aa8.32□□□□□ -1.08
PTPN12-207ENST00000440186 SPDYE6P0CI01 402 aa8.32□□□□□ -1.08
PTPN12-207ENST00000440186 SPDYE2Q495Y8 402 aa8.32□□□□□ -1.08
PTPN12-207ENST00000440186 RBM42Q9BTD8 480 aaKnown RBP8.32□□□□□ -1.08
PTPN12-207ENST00000440186 ZNF692Q9BU19 519 aaPredicted RBP8.28□□□□□ -1.08
PTPN12-207ENST00000440186 SSUH2Q9Y2M2 353 aa8.28□□□□□ -1.08
PTPN12-207ENST00000440186 AKT1S1Q96B36 256 aa8.21□□□□□ -1.1
PTPN12-207ENST00000440186 PROM2Q8N271 834 aa8.2□□□□□ -1.1
PTPN12-207ENST00000440186 PABPN1Q86U42 306 aaKnown RBP eCLIP8.18□□□□□ -1.1
PTPN12-207ENST00000440186 REM2Q8IYK8 340 aaPredicted RBP8.13□□□□□ -1.11
PTPN12-207ENST00000440186 SPDYE1Q8NFV5 336 aaPredicted RBP8.08□□□□□ -1.12
PTPN12-207ENST00000440186 PITPNM1O00562 1244 aa8.06□□□□□ -1.12
PTPN12-207ENST00000440186 STAG3Q9UJ98 1225 aa8.03□□□□□ -1.12
PTPN12-207ENST00000440186 CLEC11AQ9Y240 323 aa8.03□□□□□ -1.12
PTPN12-207ENST00000440186 FBXO3Q9UK99 471 aa8.02□□□□□ -1.13
PTPN12-207ENST00000440186 CHRDL2Q6WN34 429 aa7.97□□□□□ -1.13
PTPN12-207ENST00000440186 PRR29P0C7W0 189 aa7.95□□□□□ -1.14
PTPN12-207ENST00000440186 VASPP50552 380 aaPredicted RBP7.94□□□□□ -1.14
PTPN12-207ENST00000440186 FXR2P51116 673 aaKnown RBP eCLIP7.89□□□□□ -1.15
PTPN12-207ENST00000440186 PLCD3Q8N3E9 789 aa7.87□□□□□ -1.15
PTPN12-207ENST00000440186 PIP4P2Q8N4L2 257 aa7.87□□□□□ -1.15
PTPN12-207ENST00000440186 CREBZFQ9NS37 354 aa7.87□□□□□ -1.15
PTPN12-207ENST00000440186 MIER1Q8N108 512 aa7.86□□□□□ -1.15
PTPN12-207ENST00000440186 PRKAR2AP13861 404 aaKnown RBP7.84□□□□□ -1.15
PTPN12-207ENST00000440186 CHADLQ6NUI6 762 aa7.84□□□□□ -1.15
PTPN12-207ENST00000440186 PLEKHG5O94827 1062 aa7.83□□□□□ -1.16
PTPN12-207ENST00000440186 IFNLR1Q8IU57 520 aaPredicted RBP7.82□□□□□ -1.16
PTPN12-207ENST00000440186 MNX1P50219 401 aaPredicted RBP7.79□□□□□ -1.16
PTPN12-207ENST00000440186 KLHL34Q8N239 644 aa7.78□□□□□ -1.16
PTPN12-207ENST00000440186 ZBTB47Q9UFB7 747 aaPredicted RBP7.78□□□□□ -1.16
PTPN12-207ENST00000440186 FARP1Q9Y4F1 1045 aaPredicted RBP7.77□□□□□ -1.17
PTPN12-207ENST00000440186 SPOCK2Q92563 424 aa7.73□□□□□ -1.17
PTPN12-207ENST00000440186 NPM1P06748 294 aaKnown RBP eCLIP7.72□□□□□ -1.17
PTPN12-207ENST00000440186 POTEHQ6S545 545 aa7.71□□□□□ -1.18
PTPN12-207ENST00000440186 NUBP1P53384 320 aa7.69□□□□□ -1.18
PTPN12-207ENST00000440186 RASEFQ8IZ41 740 aa7.66□□□□□ -1.18
PTPN12-207ENST00000440186 FAM212AQ96EL1 285 aa7.63□□□□□ -1.19
PTPN12-207ENST00000440186 C19orf67A6NJJ6 358 aa7.62□□□□□ -1.19
PTPN12-207ENST00000440186 CD44P16070 742 aaKnown RBP7.62□□□□□ -1.19
PTPN12-207ENST00000440186 AMER1Q5JTC6 1135 aaPredicted RBP7.61□□□□□ -1.19
PTPN12-207ENST00000440186 HAX1O00165 279 aa7.6□□□□□ -1.19
PTPN12-207ENST00000440186 PAK3O75914 559 aaPredicted RBP7.6□□□□□ -1.19
PTPN12-207ENST00000440186 TSPYL2Q9H2G4 693 aaPredicted RBP7.6□□□□□ -1.19
PTPN12-207ENST00000440186 CIZ1Q9ULV3 898 aaPredicted RBP7.6□□□□□ -1.19
PTPN12-207ENST00000440186 GSE1Q14687 1217 aa7.59□□□□□ -1.19
PTPN12-207ENST00000440186 DCAF8Q5TAQ9 597 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms