RNA–Protein interactions for RNA: ENST00000439890.3

NANOGP9-201, Transcript of Nanog homeobox pseudogene 9, humanhuman

BASIC

Gene NANOGP9, Length 892 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP9-201ENST00000439890 AEBP2Q6ZN18 517 aaPredicted RBP29.81■■■□□ 2.36
NANOGP9-201ENST00000439890 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
NANOGP9-201ENST00000439890 SENP3Q9H4L4 574 aaPredicted RBP25.45■■□□□ 1.66
NANOGP9-201ENST00000439890 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
NANOGP9-201ENST00000439890 FOXD1Q16676 465 aa23.62■■□□□ 1.37
NANOGP9-201ENST00000439890 PLPPR3Q6T4P5 718 aa23.21■■□□□ 1.31
NANOGP9-201ENST00000439890 ADRA2BP18089 450 aa22.39■■□□□ 1.17
NANOGP9-201ENST00000439890 PPP6R1Q9UPN7 881 aa22.37■■□□□ 1.17
NANOGP9-201ENST00000439890 PIAS4Q8N2W9 510 aaPredicted RBP22.26■■□□□ 1.15
NANOGP9-201ENST00000439890 MSH5O43196 834 aa22■■□□□ 1.11
NANOGP9-201ENST00000439890 POTEDQ86YR6 584 aa20.72■□□□□ 0.91
NANOGP9-201ENST00000439890 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
NANOGP9-201ENST00000439890 MAPK8IP2Q13387 824 aaPredicted RBP20.42■□□□□ 0.86
NANOGP9-201ENST00000439890 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
NANOGP9-201ENST00000439890 DMRT2Q9Y5R5 561 aa20.21■□□□□ 0.83
NANOGP9-201ENST00000439890 CNKSR2Q8WXI2 1034 aa19.9■□□□□ 0.78
NANOGP9-201ENST00000439890 NCBP3Q53F19 620 aaKnown RBP19.79■□□□□ 0.76
NANOGP9-201ENST00000439890 RNF216Q9NWF9 866 aaPredicted RBP19.6■□□□□ 0.73
NANOGP9-201ENST00000439890 HOXD11P31277 338 aaPredicted RBP19.58■□□□□ 0.72
NANOGP9-201ENST00000439890 DCAF8L1A6NGE4 600 aa19.55■□□□□ 0.72
NANOGP9-201ENST00000439890 KCNA4P22459 653 aa19.45■□□□□ 0.7
NANOGP9-201ENST00000439890 NPM3O75607 178 aaKnown RBP19.43■□□□□ 0.7
NANOGP9-201ENST00000439890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.6
NANOGP9-201ENST00000439890 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
NANOGP9-201ENST00000439890 RNF39Q9H2S5 420 aa18.75■□□□□ 0.59
NANOGP9-201ENST00000439890 CACNB1Q02641 598 aaPredicted RBP18.68■□□□□ 0.58
NANOGP9-201ENST00000439890 C1QBPQ07021 282 aaKnown RBP18.53■□□□□ 0.56
NANOGP9-201ENST00000439890 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
NANOGP9-201ENST00000439890 SLC4A2P04920 1241 aa18.4■□□□□ 0.54
NANOGP9-201ENST00000439890 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
NANOGP9-201ENST00000439890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
NANOGP9-201ENST00000439890 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
NANOGP9-201ENST00000439890 CAPN15O75808 1086 aa18.04■□□□□ 0.48
NANOGP9-201ENST00000439890 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
NANOGP9-201ENST00000439890 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
NANOGP9-201ENST00000439890 APLP2Q06481 763 aa18■□□□□ 0.47
NANOGP9-201ENST00000439890 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
NANOGP9-201ENST00000439890 SAMD1Q6SPF0 538 aaPredicted RBP17.97■□□□□ 0.47
NANOGP9-201ENST00000439890 TRHP20396 242 aaPredicted RBP17.85■□□□□ 0.45
NANOGP9-201ENST00000439890 ZBTB22O15209 634 aa17.84■□□□□ 0.45
NANOGP9-201ENST00000439890 ZNF219Q9P2Y4 722 aaPredicted RBP17.79■□□□□ 0.44
NANOGP9-201ENST00000439890 DSG3P32926 999 aa17.71■□□□□ 0.43
NANOGP9-201ENST00000439890 ABCB7O75027 752 aa17.65■□□□□ 0.42
NANOGP9-201ENST00000439890 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
NANOGP9-201ENST00000439890 ATF5Q9Y2D1 282 aaPredicted RBP17.49■□□□□ 0.39
NANOGP9-201ENST00000439890 POLA2Q14181 598 aa17.4■□□□□ 0.38
NANOGP9-201ENST00000439890 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
NANOGP9-201ENST00000439890 ATXN8OSP0DMR3 200 aa17.39■□□□□ 0.37
NANOGP9-201ENST00000439890 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
NANOGP9-201ENST00000439890 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
NANOGP9-201ENST00000439890 FBLN2P98095 1184 aa16.91■□□□□ 0.3
NANOGP9-201ENST00000439890 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
NANOGP9-201ENST00000439890 MKRN4PQ13434 485 aaPredicted RBP16.7■□□□□ 0.26
NANOGP9-201ENST00000439890 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
NANOGP9-201ENST00000439890 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.24
NANOGP9-201ENST00000439890 SPDYE6P0CI01 402 aa16.58■□□□□ 0.24
NANOGP9-201ENST00000439890 SPDYE2Q495Y8 402 aa16.58■□□□□ 0.24
NANOGP9-201ENST00000439890 ZNF692Q9BU19 519 aaPredicted RBP16.49■□□□□ 0.23
NANOGP9-201ENST00000439890 REM2Q8IYK8 340 aaPredicted RBP16.47■□□□□ 0.23
NANOGP9-201ENST00000439890 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
NANOGP9-201ENST00000439890 SSUH2Q9Y2M2 353 aa16.36■□□□□ 0.21
NANOGP9-201ENST00000439890 POTEHQ6S545 545 aa16.35■□□□□ 0.21
NANOGP9-201ENST00000439890 PITPNM1O00562 1244 aa16.3■□□□□ 0.2
NANOGP9-201ENST00000439890 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
NANOGP9-201ENST00000439890 CLEC11AQ9Y240 323 aa16.24■□□□□ 0.19
NANOGP9-201ENST00000439890 SPDYE1Q8NFV5 336 aaPredicted RBP16.23■□□□□ 0.19
NANOGP9-201ENST00000439890 SPDYE4A6NLX3 237 aa16.22■□□□□ 0.19
NANOGP9-201ENST00000439890 PIP4P2Q8N4L2 257 aa16.09■□□□□ 0.17
NANOGP9-201ENST00000439890 FXR2P51116 673 aaKnown RBP eCLIP16.02■□□□□ 0.16
NANOGP9-201ENST00000439890 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
NANOGP9-201ENST00000439890 PRKAR2AP13861 404 aaKnown RBP15.92■□□□□ 0.14
NANOGP9-201ENST00000439890 STAG3Q9UJ98 1225 aa15.89■□□□□ 0.13
NANOGP9-201ENST00000439890 FKBP8Q14318 412 aa15.87■□□□□ 0.13
NANOGP9-201ENST00000439890 CHADLQ6NUI6 762 aa15.83■□□□□ 0.12
NANOGP9-201ENST00000439890 HAX1O00165 279 aa15.76■□□□□ 0.11
NANOGP9-201ENST00000439890 PROM2Q8N271 834 aa15.74■□□□□ 0.11
NANOGP9-201ENST00000439890 CREBZFQ9NS37 354 aa15.61■□□□□ 0.09
NANOGP9-201ENST00000439890 FARP1Q9Y4F1 1045 aaPredicted RBP15.6■□□□□ 0.09
NANOGP9-201ENST00000439890 SP7Q8TDD2 431 aaPredicted RBP15.53■□□□□ 0.08
NANOGP9-201ENST00000439890 C19orf67A6NJJ6 358 aa15.49■□□□□ 0.07
NANOGP9-201ENST00000439890 PLEKHG5O94827 1062 aa15.48■□□□□ 0.07
NANOGP9-201ENST00000439890 EVX2Q03828 476 aa15.46■□□□□ 0.07
NANOGP9-201ENST00000439890 CD44P16070 742 aaKnown RBP15.45■□□□□ 0.06
NANOGP9-201ENST00000439890 MIER1Q8N108 512 aa15.45■□□□□ 0.06
NANOGP9-201ENST00000439890 NPM1P06748 294 aaKnown RBP eCLIP15.43■□□□□ 0.06
NANOGP9-201ENST00000439890 PLCD3Q8N3E9 789 aa15.43■□□□□ 0.06
NANOGP9-201ENST00000439890 FBXO3Q9UK99 471 aa15.41■□□□□ 0.06
NANOGP9-201ENST00000439890 PAK3O75914 559 aaPredicted RBP15.33■□□□□ 0.04
NANOGP9-201ENST00000439890 MNX1P50219 401 aaPredicted RBP15.33■□□□□ 0.04
NANOGP9-201ENST00000439890 ZRANB1Q9UGI0 708 aa15.31■□□□□ 0.04
NANOGP9-201ENST00000439890 ZBTB47Q9UFB7 747 aaPredicted RBP15.24■□□□□ 0.03
NANOGP9-201ENST00000439890 GABBR2O75899 941 aa15.19■□□□□ 0.02
NANOGP9-201ENST00000439890 VASPP50552 380 aaPredicted RBP15.19■□□□□ 0.02
NANOGP9-201ENST00000439890 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
NANOGP9-201ENST00000439890 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
NANOGP9-201ENST00000439890 KLHL34Q8N239 644 aa15.12■□□□□ 0.01
NANOGP9-201ENST00000439890 PHF12Q96QT6 1004 aa15.11■□□□□ 0.01
NANOGP9-201ENST00000439890 CLCN6P51797 869 aa15.08■□□□□ 0
NANOGP9-201ENST00000439890 RASEFQ8IZ41 740 aa15.08■□□□□ 0
NANOGP9-201ENST00000439890 FAM212AQ96EL1 285 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms