RNA–Protein interactions for RNA: ENST00000439736.1

KCND3-IT1-201, KCND3 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene KCND3-IT1, Length 376 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCND3-IT1-201ENST00000439736 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
KCND3-IT1-201ENST00000439736 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
KCND3-IT1-201ENST00000439736 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
KCND3-IT1-201ENST00000439736 PHF23Q9BUL5 403 aaPredicted RBP16.08■□□□□ 0.16
KCND3-IT1-201ENST00000439736 FOXD1Q16676 465 aa15.28■□□□□ 0.04
KCND3-IT1-201ENST00000439736 POTEDQ86YR6 584 aa14.43□□□□□ -0.1
KCND3-IT1-201ENST00000439736 MSH5O43196 834 aa14.23□□□□□ -0.13
KCND3-IT1-201ENST00000439736 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
KCND3-IT1-201ENST00000439736 PIAS4Q8N2W9 510 aaPredicted RBP14.16□□□□□ -0.14
KCND3-IT1-201ENST00000439736 PLPPR3Q6T4P5 718 aa14.11□□□□□ -0.15
KCND3-IT1-201ENST00000439736 ADRA2BP18089 450 aa14.1□□□□□ -0.15
KCND3-IT1-201ENST00000439736 MAPK8IP2Q13387 824 aaPredicted RBP13.05□□□□□ -0.32
KCND3-IT1-201ENST00000439736 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
KCND3-IT1-201ENST00000439736 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
KCND3-IT1-201ENST00000439736 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
KCND3-IT1-201ENST00000439736 PPP4R3CPQ6ZMV5 832 aa12.42□□□□□ -0.42
KCND3-IT1-201ENST00000439736 DCAF8L1A6NGE4 600 aa12.38□□□□□ -0.43
KCND3-IT1-201ENST00000439736 HOXD11P31277 338 aaPredicted RBP12.3□□□□□ -0.44
KCND3-IT1-201ENST00000439736 RNF39Q9H2S5 420 aa12.21□□□□□ -0.45
KCND3-IT1-201ENST00000439736 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
KCND3-IT1-201ENST00000439736 RNF216Q9NWF9 866 aaPredicted RBP12.12□□□□□ -0.47
KCND3-IT1-201ENST00000439736 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
KCND3-IT1-201ENST00000439736 DNAJC5BQ9UF47 199 aa11.81□□□□□ -0.52
KCND3-IT1-201ENST00000439736 NCBP3Q53F19 620 aaKnown RBP11.74□□□□□ -0.53
KCND3-IT1-201ENST00000439736 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
KCND3-IT1-201ENST00000439736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.71□□□□□ -0.53
KCND3-IT1-201ENST00000439736 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
KCND3-IT1-201ENST00000439736 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
KCND3-IT1-201ENST00000439736 DSG3P32926 999 aa11.37□□□□□ -0.59
KCND3-IT1-201ENST00000439736 CAPN15O75808 1086 aa11.35□□□□□ -0.59
KCND3-IT1-201ENST00000439736 KCNA4P22459 653 aa11.33□□□□□ -0.6
KCND3-IT1-201ENST00000439736 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
KCND3-IT1-201ENST00000439736 POTEHQ6S545 545 aa11.22□□□□□ -0.61
KCND3-IT1-201ENST00000439736 ABCB7O75027 752 aa11.14□□□□□ -0.63
KCND3-IT1-201ENST00000439736 TRHP20396 242 aaPredicted RBP11.14□□□□□ -0.63
KCND3-IT1-201ENST00000439736 ZNF219Q9P2Y4 722 aaPredicted RBP10.99□□□□□ -0.65
KCND3-IT1-201ENST00000439736 APLP2Q06481 763 aa10.92□□□□□ -0.66
KCND3-IT1-201ENST00000439736 NISCHQ9Y2I1 1504 aa10.92□□□□□ -0.66
KCND3-IT1-201ENST00000439736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.9□□□□□ -0.66
KCND3-IT1-201ENST00000439736 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.66
KCND3-IT1-201ENST00000439736 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
KCND3-IT1-201ENST00000439736 POLA2Q14181 598 aa10.8□□□□□ -0.68
KCND3-IT1-201ENST00000439736 MYCNP04198 464 aaPredicted RBP10.75□□□□□ -0.69
KCND3-IT1-201ENST00000439736 RBM42Q9BTD8 480 aaKnown RBP10.71□□□□□ -0.69
KCND3-IT1-201ENST00000439736 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
KCND3-IT1-201ENST00000439736 CHRDL2Q6WN34 429 aa10.69□□□□□ -0.7
KCND3-IT1-201ENST00000439736 SLC4A1APQ9BWU0 796 aaKnown RBP10.57□□□□□ -0.72
KCND3-IT1-201ENST00000439736 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
KCND3-IT1-201ENST00000439736 ZBTB22O15209 634 aa10.47□□□□□ -0.73
KCND3-IT1-201ENST00000439736 OSCARQ8IYS5 282 aa10.47□□□□□ -0.73
KCND3-IT1-201ENST00000439736 AKT1S1Q96B36 256 aa10.47□□□□□ -0.73
KCND3-IT1-201ENST00000439736 REM2Q8IYK8 340 aaPredicted RBP10.46□□□□□ -0.73
KCND3-IT1-201ENST00000439736 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
KCND3-IT1-201ENST00000439736 SP7Q8TDD2 431 aaPredicted RBP10.39□□□□□ -0.75
KCND3-IT1-201ENST00000439736 ZBTB12Q9Y330 459 aaPredicted RBP10.39□□□□□ -0.75
KCND3-IT1-201ENST00000439736 PITPNM1O00562 1244 aa10.36□□□□□ -0.75
KCND3-IT1-201ENST00000439736 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.76
KCND3-IT1-201ENST00000439736 HAX1O00165 279 aa10.26□□□□□ -0.77
KCND3-IT1-201ENST00000439736 EVX2Q03828 476 aa10.26□□□□□ -0.77
KCND3-IT1-201ENST00000439736 ATXN8OSP0DMR3 200 aa10.17□□□□□ -0.78
KCND3-IT1-201ENST00000439736 MKRN4PQ13434 485 aaPredicted RBP10.17□□□□□ -0.78
KCND3-IT1-201ENST00000439736 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
KCND3-IT1-201ENST00000439736 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
KCND3-IT1-201ENST00000439736 SPDYE2Q495Y8 402 aa10.12□□□□□ -0.79
KCND3-IT1-201ENST00000439736 FBLN2P98095 1184 aa10.1□□□□□ -0.79
KCND3-IT1-201ENST00000439736 PRKAR2AP13861 404 aaKnown RBP10.07□□□□□ -0.8
KCND3-IT1-201ENST00000439736 CLEC11AQ9Y240 323 aa10.07□□□□□ -0.8
KCND3-IT1-201ENST00000439736 SSUH2Q9Y2M2 353 aa10.02□□□□□ -0.81
KCND3-IT1-201ENST00000439736 ZNF692Q9BU19 519 aaPredicted RBP10.01□□□□□ -0.81
KCND3-IT1-201ENST00000439736 SPDYE1Q8NFV5 336 aaPredicted RBP10□□□□□ -0.81
KCND3-IT1-201ENST00000439736 C19orf67A6NJJ6 358 aa9.97□□□□□ -0.81
KCND3-IT1-201ENST00000439736 CHADLQ6NUI6 762 aa9.97□□□□□ -0.81
KCND3-IT1-201ENST00000439736 GABBR2O75899 941 aa9.9□□□□□ -0.82
KCND3-IT1-201ENST00000439736 PABPN1Q86U42 306 aaKnown RBP eCLIP9.89□□□□□ -0.83
KCND3-IT1-201ENST00000439736 PRR29P0C7W0 189 aa9.83□□□□□ -0.84
KCND3-IT1-201ENST00000439736 POTEIP0CG38 1075 aa9.76□□□□□ -0.85
KCND3-IT1-201ENST00000439736 LHX8Q68G74 356 aa9.76□□□□□ -0.85
KCND3-IT1-201ENST00000439736 CSRNP3Q8WYN3 585 aa9.73□□□□□ -0.85
KCND3-IT1-201ENST00000439736 FARP1Q9Y4F1 1045 aaPredicted RBP9.73□□□□□ -0.85
KCND3-IT1-201ENST00000439736 CD44P16070 742 aaKnown RBP9.71□□□□□ -0.86
KCND3-IT1-201ENST00000439736 CREBZFQ9NS37 354 aa9.6□□□□□ -0.87
KCND3-IT1-201ENST00000439736 ZRANB1Q9UGI0 708 aa9.56□□□□□ -0.88
KCND3-IT1-201ENST00000439736 CCDC180Q9P1Z9 1646 aa9.55□□□□□ -0.88
KCND3-IT1-201ENST00000439736 ZNF579Q8NAF0 562 aaKnown RBP9.53□□□□□ -0.88
KCND3-IT1-201ENST00000439736 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
KCND3-IT1-201ENST00000439736 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.89
KCND3-IT1-201ENST00000439736 SPDYE4A6NLX3 237 aa9.47□□□□□ -0.89
KCND3-IT1-201ENST00000439736 EHMT2Q96KQ7 1210 aa9.47□□□□□ -0.89
KCND3-IT1-201ENST00000439736 POTEB2H3BUK9 544 aa9.46□□□□□ -0.9
KCND3-IT1-201ENST00000439736 CLCN6P51797 869 aa9.46□□□□□ -0.9
KCND3-IT1-201ENST00000439736 PHF12Q96QT6 1004 aa9.46□□□□□ -0.9
KCND3-IT1-201ENST00000439736 MNX1P50219 401 aaPredicted RBP9.43□□□□□ -0.9
KCND3-IT1-201ENST00000439736 STAG3Q9UJ98 1225 aa9.43□□□□□ -0.9
KCND3-IT1-201ENST00000439736 PELP1Q8IZL8 1130 aaKnown RBP9.41□□□□□ -0.9
KCND3-IT1-201ENST00000439736 OTUD5Q96G74 571 aa9.41□□□□□ -0.9
KCND3-IT1-201ENST00000439736 PLSCR2Q9NRY7 297 aa9.34□□□□□ -0.91
KCND3-IT1-201ENST00000439736 PAK3O75914 559 aaPredicted RBP9.31□□□□□ -0.92
KCND3-IT1-201ENST00000439736 POTEJP0CG39 1038 aa9.3□□□□□ -0.92
KCND3-IT1-201ENST00000439736 MS4A3Q96HJ5 214 aa9.3□□□□□ -0.92
KCND3-IT1-201ENST00000439736 NPM1P06748 294 aaKnown RBP eCLIP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms