RNA–Protein interactions for RNA: ENST00000439655.1

AC000041.1-201, humanhuman

BASIC

Gene AC000041.1, Length 175 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC000041.1-201ENST00000439655 AEBP2Q6ZN18 517 aaPredicted RBP23.82■■□□□ 1.4
AC000041.1-201ENST00000439655 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
AC000041.1-201ENST00000439655 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
AC000041.1-201ENST00000439655 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
AC000041.1-201ENST00000439655 FOXD1Q16676 465 aa18.78■□□□□ 0.6
AC000041.1-201ENST00000439655 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
AC000041.1-201ENST00000439655 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
AC000041.1-201ENST00000439655 ADRA2BP18089 450 aa17.95■□□□□ 0.46
AC000041.1-201ENST00000439655 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
AC000041.1-201ENST00000439655 MSH5O43196 834 aa17.36■□□□□ 0.37
AC000041.1-201ENST00000439655 PPP4R3CPQ6ZMV5 832 aa16.49■□□□□ 0.23
AC000041.1-201ENST00000439655 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
AC000041.1-201ENST00000439655 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
AC000041.1-201ENST00000439655 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
AC000041.1-201ENST00000439655 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
AC000041.1-201ENST00000439655 POTEDQ86YR6 584 aa16.02■□□□□ 0.16
AC000041.1-201ENST00000439655 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
AC000041.1-201ENST00000439655 KCNA4P22459 653 aa15.99■□□□□ 0.15
AC000041.1-201ENST00000439655 NPM3O75607 178 aaKnown RBP15.8■□□□□ 0.12
AC000041.1-201ENST00000439655 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
AC000041.1-201ENST00000439655 HOXD11P31277 338 aaPredicted RBP15.75■□□□□ 0.11
AC000041.1-201ENST00000439655 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
AC000041.1-201ENST00000439655 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
AC000041.1-201ENST00000439655 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
AC000041.1-201ENST00000439655 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
AC000041.1-201ENST00000439655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.01
AC000041.1-201ENST00000439655 SLC4A2P04920 1241 aa14.95□□□□□ -0.02
AC000041.1-201ENST00000439655 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
AC000041.1-201ENST00000439655 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
AC000041.1-201ENST00000439655 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
AC000041.1-201ENST00000439655 FOXD4L1Q9NU39 408 aa14.75□□□□□ -0.05
AC000041.1-201ENST00000439655 ZBTB22O15209 634 aa14.72□□□□□ -0.05
AC000041.1-201ENST00000439655 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
AC000041.1-201ENST00000439655 MYCNP04198 464 aaPredicted RBP14.6□□□□□ -0.07
AC000041.1-201ENST00000439655 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
AC000041.1-201ENST00000439655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
AC000041.1-201ENST00000439655 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
AC000041.1-201ENST00000439655 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
AC000041.1-201ENST00000439655 APLP2Q06481 763 aa14.38□□□□□ -0.11
AC000041.1-201ENST00000439655 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
AC000041.1-201ENST00000439655 CAPN15O75808 1086 aa14.31□□□□□ -0.12
AC000041.1-201ENST00000439655 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
AC000041.1-201ENST00000439655 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
AC000041.1-201ENST00000439655 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
AC000041.1-201ENST00000439655 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.13
AC000041.1-201ENST00000439655 DSG3P32926 999 aa14.11□□□□□ -0.15
AC000041.1-201ENST00000439655 ABCB7O75027 752 aa14.03□□□□□ -0.16
AC000041.1-201ENST00000439655 POLA2Q14181 598 aa13.95□□□□□ -0.18
AC000041.1-201ENST00000439655 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
AC000041.1-201ENST00000439655 FBLN2P98095 1184 aa13.61□□□□□ -0.23
AC000041.1-201ENST00000439655 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
AC000041.1-201ENST00000439655 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
AC000041.1-201ENST00000439655 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
AC000041.1-201ENST00000439655 FKBP8Q14318 412 aa13.42□□□□□ -0.26
AC000041.1-201ENST00000439655 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
AC000041.1-201ENST00000439655 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
AC000041.1-201ENST00000439655 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
AC000041.1-201ENST00000439655 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
AC000041.1-201ENST00000439655 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
AC000041.1-201ENST00000439655 SSUH2Q9Y2M2 353 aa13.25□□□□□ -0.29
AC000041.1-201ENST00000439655 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
AC000041.1-201ENST00000439655 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
AC000041.1-201ENST00000439655 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
AC000041.1-201ENST00000439655 PROM2Q8N271 834 aa13.01□□□□□ -0.33
AC000041.1-201ENST00000439655 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
AC000041.1-201ENST00000439655 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
AC000041.1-201ENST00000439655 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
AC000041.1-201ENST00000439655 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
AC000041.1-201ENST00000439655 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
AC000041.1-201ENST00000439655 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
AC000041.1-201ENST00000439655 PRR29P0C7W0 189 aa12.78□□□□□ -0.36
AC000041.1-201ENST00000439655 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
AC000041.1-201ENST00000439655 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
AC000041.1-201ENST00000439655 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
AC000041.1-201ENST00000439655 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
AC000041.1-201ENST00000439655 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
AC000041.1-201ENST00000439655 POTEHQ6S545 545 aa12.65□□□□□ -0.38
AC000041.1-201ENST00000439655 VASPP50552 380 aaPredicted RBP12.64□□□□□ -0.39
AC000041.1-201ENST00000439655 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
AC000041.1-201ENST00000439655 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
AC000041.1-201ENST00000439655 MIER1Q8N108 512 aa12.53□□□□□ -0.4
AC000041.1-201ENST00000439655 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
AC000041.1-201ENST00000439655 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
AC000041.1-201ENST00000439655 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
AC000041.1-201ENST00000439655 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
AC000041.1-201ENST00000439655 IFNLR1Q8IU57 520 aaPredicted RBP12.48□□□□□ -0.41
AC000041.1-201ENST00000439655 KLHL34Q8N239 644 aa12.43□□□□□ -0.42
AC000041.1-201ENST00000439655 ZBTB47Q9UFB7 747 aaPredicted RBP12.39□□□□□ -0.43
AC000041.1-201ENST00000439655 NPM1P06748 294 aaKnown RBP eCLIP12.38□□□□□ -0.43
AC000041.1-201ENST00000439655 HAX1O00165 279 aa12.34□□□□□ -0.43
AC000041.1-201ENST00000439655 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
AC000041.1-201ENST00000439655 SPOCK2Q92563 424 aa12.3□□□□□ -0.44
AC000041.1-201ENST00000439655 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
AC000041.1-201ENST00000439655 NUBP1P53384 320 aa12.26□□□□□ -0.45
AC000041.1-201ENST00000439655 EVX2Q03828 476 aa12.25□□□□□ -0.45
AC000041.1-201ENST00000439655 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
AC000041.1-201ENST00000439655 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
AC000041.1-201ENST00000439655 ZRANB1Q9UGI0 708 aa12.19□□□□□ -0.46
AC000041.1-201ENST00000439655 DCAF8L2P0C7V8 631 aa12.18□□□□□ -0.46
AC000041.1-201ENST00000439655 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms