RNA–Protein interactions for RNA: ENST00000439495.5

ALS2-204, Transcript of ALS2, alsin Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene ALS2, Length 3,242 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2-204ENST00000439495 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
ALS2-204ENST00000439495 SHROOM4Q9ULL8 1493 aa15□□□□□ -0.01
ALS2-204ENST00000439495 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
ALS2-204ENST00000439495 SUPT5HO00267 1087 aaKnown RBP14.72□□□□□ -0.05
ALS2-204ENST00000439495 ZCCHC6Q5VYS8 1495 aaKnown RBP14.46□□□□□ -0.09
ALS2-204ENST00000439495 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
ALS2-204ENST00000439495 CHIC1Q5VXU3 224 aa14.09□□□□□ -0.15
ALS2-204ENST00000439495 MYO15BQ96JP2 1530 aa13.97□□□□□ -0.17
ALS2-204ENST00000439495 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
ALS2-204ENST00000439495 LOC105371045A0A1W2PR82 267 aa13.82□□□□□ -0.2
ALS2-204ENST00000439495 SCRIBQ14160 1630 aa13.8□□□□□ -0.2
ALS2-204ENST00000439495 PCGF6Q9BYE7 350 aa13.8□□□□□ -0.2
ALS2-204ENST00000439495 ABCC9O60706 1549 aa13.78□□□□□ -0.2
ALS2-204ENST00000439495 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
ALS2-204ENST00000439495 FAM9AQ8IZU1 332 aaPredicted RBP13.67□□□□□ -0.22
ALS2-204ENST00000439495 RSF1Q96T23 1441 aaPredicted RBP13.63□□□□□ -0.23
ALS2-204ENST00000439495 TRIM41Q8WV44 630 aa13.62□□□□□ -0.23
ALS2-204ENST00000439495 HRCP23327 699 aa13.6□□□□□ -0.23
ALS2-204ENST00000439495 CECR2Q9BXF3 1484 aa13.5□□□□□ -0.25
ALS2-204ENST00000439495 PPARGC1BQ86YN6 1023 aaKnown RBP13.49□□□□□ -0.25
ALS2-204ENST00000439495 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
ALS2-204ENST00000439495 NACADO15069 1562 aa13.45□□□□□ -0.26
ALS2-204ENST00000439495 MROH2BQ7Z745 1585 aa13.4□□□□□ -0.26
ALS2-204ENST00000439495 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
ALS2-204ENST00000439495 WIZO95785 1651 aa13.32□□□□□ -0.28
ALS2-204ENST00000439495 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
ALS2-204ENST00000439495 TTBK1Q5TCY1 1321 aaPredicted RBP13.22□□□□□ -0.29
ALS2-204ENST00000439495 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
ALS2-204ENST00000439495 ABCC8Q09428 1581 aa13.09□□□□□ -0.31
ALS2-204ENST00000439495 CCDC88BA6NC98 1476 aa13.07□□□□□ -0.32
ALS2-204ENST00000439495 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
ALS2-204ENST00000439495 UBTFP17480 764 aaKnown RBP13.05□□□□□ -0.32
ALS2-204ENST00000439495 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
ALS2-204ENST00000439495 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
ALS2-204ENST00000439495 UNC13AQ9UPW8 1703 aa13.02□□□□□ -0.32
ALS2-204ENST00000439495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
ALS2-204ENST00000439495 SOGA1O94964 1423 aa12.98□□□□□ -0.33
ALS2-204ENST00000439495 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
ALS2-204ENST00000439495 RANGAP1P46060 587 aaPredicted RBP12.98□□□□□ -0.33
ALS2-204ENST00000439495 CCER1Q8TC90 406 aaPredicted RBP12.98□□□□□ -0.33
ALS2-204ENST00000439495 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
ALS2-204ENST00000439495 EIF4G1Q04637 1599 aaKnown RBP12.93□□□□□ -0.34
ALS2-204ENST00000439495 RUSC2Q8N2Y8 1516 aa12.91□□□□□ -0.34
ALS2-204ENST00000439495 BICRAQ9NZM4 1560 aa12.89□□□□□ -0.35
ALS2-204ENST00000439495 CEP162Q5TB80 1403 aa12.89□□□□□ -0.35
ALS2-204ENST00000439495 WRNQ14191 1432 aaPredicted RBP eCLIP12.85□□□□□ -0.35
ALS2-204ENST00000439495 BAZ1BQ9UIG0 1483 aaKnown RBP12.81□□□□□ -0.36
ALS2-204ENST00000439495 TNIKQ9UKE5 1360 aa12.8□□□□□ -0.36
ALS2-204ENST00000439495 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
ALS2-204ENST00000439495 HNRNPUL2Q1KMD3 747 aaKnown RBP12.77□□□□□ -0.37
ALS2-204ENST00000439495 EEA1Q15075 1411 aa12.76□□□□□ -0.37
ALS2-204ENST00000439495 APLP2Q06481 763 aa12.75□□□□□ -0.37
ALS2-204ENST00000439495 GOLGA3Q08378 1498 aa12.75□□□□□ -0.37
ALS2-204ENST00000439495 SYNJ1O43426 1573 aa12.72□□□□□ -0.37
ALS2-204ENST00000439495 CLIP1P30622 1438 aa12.68□□□□□ -0.38
ALS2-204ENST00000439495 PEG3Q9GZU2 1588 aa12.68□□□□□ -0.38
ALS2-204ENST00000439495 CEP164Q9UPV0 1460 aa12.67□□□□□ -0.38
ALS2-204ENST00000439495 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
ALS2-204ENST00000439495 DIEXFQ68CQ4 756 aaKnown RBP12.63□□□□□ -0.39
ALS2-204ENST00000439495 SCAF1Q9H7N4 1312 aaKnown RBP12.56□□□□□ -0.4
ALS2-204ENST00000439495 VPS8Q8N3P4 1428 aa12.55□□□□□ -0.4
ALS2-204ENST00000439495 KIF21BO75037 1637 aa12.54□□□□□ -0.4
ALS2-204ENST00000439495 ITGAEP38570 1179 aa12.52□□□□□ -0.41
ALS2-204ENST00000439495 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
ALS2-204ENST00000439495 TOP2BQ02880 1626 aa12.5□□□□□ -0.41
ALS2-204ENST00000439495 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
ALS2-204ENST00000439495 NCAPD3P42695 1498 aa12.48□□□□□ -0.41
ALS2-204ENST00000439495 NEUROD1Q13562 356 aa12.48□□□□□ -0.41
ALS2-204ENST00000439495 KANK4Q5T7N3 995 aaPredicted RBP12.47□□□□□ -0.41
ALS2-204ENST00000439495 ATP1B4Q9UN42 357 aaPredicted RBP12.47□□□□□ -0.41
ALS2-204ENST00000439495 KIF27Q86VH2 1401 aa12.46□□□□□ -0.42
ALS2-204ENST00000439495 CUX1P39880 1505 aa12.45□□□□□ -0.42
ALS2-204ENST00000439495 ACIN1Q9UKV3 1341 aaKnown RBP12.44□□□□□ -0.42
ALS2-204ENST00000439495 CENPBP07199 599 aaPredicted RBP12.44□□□□□ -0.42
ALS2-204ENST00000439495 P3H3Q8IVL6 736 aa12.43□□□□□ -0.42
ALS2-204ENST00000439495 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
ALS2-204ENST00000439495 PRXQ9BXM0 1461 aa12.41□□□□□ -0.42
ALS2-204ENST00000439495 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
ALS2-204ENST00000439495 CFTRP13569 1480 aa12.4□□□□□ -0.43
ALS2-204ENST00000439495 CUX2O14529 1486 aa12.39□□□□□ -0.43
ALS2-204ENST00000439495 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
ALS2-204ENST00000439495 ARAP1Q96P48 1450 aa12.38□□□□□ -0.43
ALS2-204ENST00000439495 MIER1Q8N108 512 aa12.36□□□□□ -0.43
ALS2-204ENST00000439495 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
ALS2-204ENST00000439495 CADPSQ9ULU8 1353 aa12.34□□□□□ -0.43
ALS2-204ENST00000439495 FAM50AQ14320 339 aaKnown RBP12.32□□□□□ -0.44
ALS2-204ENST00000439495 IGF1RP08069 1367 aa12.31□□□□□ -0.44
ALS2-204ENST00000439495 CARMIL1Q5VZK9 1371 aa12.31□□□□□ -0.44
ALS2-204ENST00000439495 ARHGAP35Q9NRY4 1499 aa12.3□□□□□ -0.44
ALS2-204ENST00000439495 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
ALS2-204ENST00000439495 DHX57Q6P158 1386 aaKnown RBP12.27□□□□□ -0.45
ALS2-204ENST00000439495 CCNB3Q8WWL7 1395 aa12.26□□□□□ -0.45
ALS2-204ENST00000439495 CC2D2AQ9P2K1 1620 aa12.25□□□□□ -0.45
ALS2-204ENST00000439495 FANCD2Q9BXW9 1451 aa12.24□□□□□ -0.45
ALS2-204ENST00000439495 RAD54L2Q9Y4B4 1467 aa12.23□□□□□ -0.45
ALS2-204ENST00000439495 NESP48681 1621 aa12.22□□□□□ -0.45
ALS2-204ENST00000439495 RRBP1Q9P2E9 1410 aaKnown RBP12.19□□□□□ -0.46
ALS2-204ENST00000439495 FHOD3Q2V2M9 1422 aa12.18□□□□□ -0.46
ALS2-204ENST00000439495 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
ALS2-204ENST00000439495 RAB3GAP2Q9H2M9 1393 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms