RNA–Protein interactions for RNA: ENST00000437728.1

RPS3AP29-201, Transcript of ribosomal protein S3a pseudogene 29, humanhuman

BASIC

Gene RPS3AP29, Length 769 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP29-201ENST00000437728 AEBP2Q6ZN18 517 aaPredicted RBP33.87■■■■□ 3.01
RPS3AP29-201ENST00000437728 CHIC1Q5VXU3 224 aa32.78■■■□□ 2.84
RPS3AP29-201ENST00000437728 PHF23Q9BUL5 403 aaPredicted RBP28.8■■■□□ 2.2
RPS3AP29-201ENST00000437728 SENP3Q9H4L4 574 aaPredicted RBP28.79■■■□□ 2.2
RPS3AP29-201ENST00000437728 FOXD1Q16676 465 aa26.77■■□□□ 1.88
RPS3AP29-201ENST00000437728 PLPPR3Q6T4P5 718 aa26.49■■□□□ 1.83
RPS3AP29-201ENST00000437728 PPP6R1Q9UPN7 881 aa25.52■■□□□ 1.68
RPS3AP29-201ENST00000437728 ADRA2BP18089 450 aa25.5■■□□□ 1.67
RPS3AP29-201ENST00000437728 PIAS4Q8N2W9 510 aaPredicted RBP25.19■■□□□ 1.62
RPS3AP29-201ENST00000437728 MSH5O43196 834 aa24.8■■□□□ 1.56
RPS3AP29-201ENST00000437728 PPP4R3CPQ6ZMV5 832 aa23.32■■□□□ 1.32
RPS3AP29-201ENST00000437728 SCAF1Q9H7N4 1312 aaKnown RBP23.32■■□□□ 1.32
RPS3AP29-201ENST00000437728 MAPK8IP2Q13387 824 aaPredicted RBP23.24■■□□□ 1.31
RPS3AP29-201ENST00000437728 POTEDQ86YR6 584 aa23.14■■□□□ 1.29
RPS3AP29-201ENST00000437728 DMRT2Q9Y5R5 561 aa22.92■■□□□ 1.26
RPS3AP29-201ENST00000437728 CNKSR2Q8WXI2 1034 aa22.72■■□□□ 1.23
RPS3AP29-201ENST00000437728 NCBP3Q53F19 620 aaKnown RBP22.61■■□□□ 1.21
RPS3AP29-201ENST00000437728 KCNA4P22459 653 aa22.42■■□□□ 1.18
RPS3AP29-201ENST00000437728 RNF216Q9NWF9 866 aaPredicted RBP22.34■■□□□ 1.17
RPS3AP29-201ENST00000437728 HOXD11P31277 338 aaPredicted RBP22.32■■□□□ 1.16
RPS3AP29-201ENST00000437728 NPM3O75607 178 aaKnown RBP22.27■■□□□ 1.16
RPS3AP29-201ENST00000437728 DCAF8L1A6NGE4 600 aa22.04■■□□□ 1.12
RPS3AP29-201ENST00000437728 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
RPS3AP29-201ENST00000437728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.33■■□□□ 1.01
RPS3AP29-201ENST00000437728 SLC4A1APQ9BWU0 796 aaKnown RBP21.3■■□□□ 1
RPS3AP29-201ENST00000437728 RNF39Q9H2S5 420 aa21.21■□□□□ 0.99
RPS3AP29-201ENST00000437728 SLC4A2P04920 1241 aa21.1■□□□□ 0.97
RPS3AP29-201ENST00000437728 CACNB1Q02641 598 aaPredicted RBP20.94■□□□□ 0.94
RPS3AP29-201ENST00000437728 C1QBPQ07021 282 aaKnown RBP20.94■□□□□ 0.94
RPS3AP29-201ENST00000437728 U3KPZ7 1027 aaPredicted RBP20.91■□□□□ 0.94
RPS3AP29-201ENST00000437728 FOXD4L1Q9NU39 408 aa20.72■□□□□ 0.91
RPS3AP29-201ENST00000437728 ZBTB22O15209 634 aa20.62■□□□□ 0.89
RPS3AP29-201ENST00000437728 MYCNP04198 464 aaPredicted RBP20.59■□□□□ 0.89
RPS3AP29-201ENST00000437728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.54■□□□□ 0.88
RPS3AP29-201ENST00000437728 HNRNPUL2Q1KMD3 747 aaKnown RBP20.54■□□□□ 0.88
RPS3AP29-201ENST00000437728 SAMD1Q6SPF0 538 aaPredicted RBP20.46■□□□□ 0.87
RPS3AP29-201ENST00000437728 SPINK5Q9NQ38 1064 aaPredicted RBP20.45■□□□□ 0.86
RPS3AP29-201ENST00000437728 CAPN15O75808 1086 aa20.4■□□□□ 0.86
RPS3AP29-201ENST00000437728 APLP2Q06481 763 aa20.4■□□□□ 0.86
RPS3AP29-201ENST00000437728 EHMT2Q96KQ7 1210 aa20.38■□□□□ 0.85
RPS3AP29-201ENST00000437728 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
RPS3AP29-201ENST00000437728 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
RPS3AP29-201ENST00000437728 ZNF219Q9P2Y4 722 aaPredicted RBP20.18■□□□□ 0.82
RPS3AP29-201ENST00000437728 DSG3P32926 999 aa20.09■□□□□ 0.81
RPS3AP29-201ENST00000437728 ATF5Q9Y2D1 282 aaPredicted RBP20.08■□□□□ 0.81
RPS3AP29-201ENST00000437728 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
RPS3AP29-201ENST00000437728 ABCB7O75027 752 aa19.99■□□□□ 0.79
RPS3AP29-201ENST00000437728 ATXN8OSP0DMR3 200 aa19.99■□□□□ 0.79
RPS3AP29-201ENST00000437728 POLA2Q14181 598 aa19.81■□□□□ 0.76
RPS3AP29-201ENST00000437728 ZBTB12Q9Y330 459 aaPredicted RBP19.43■□□□□ 0.7
RPS3AP29-201ENST00000437728 FBLN2P98095 1184 aa19.26■□□□□ 0.67
RPS3AP29-201ENST00000437728 MKRN4PQ13434 485 aaPredicted RBP19.17■□□□□ 0.66
RPS3AP29-201ENST00000437728 RBM42Q9BTD8 480 aaKnown RBP19.16■□□□□ 0.66
RPS3AP29-201ENST00000437728 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
RPS3AP29-201ENST00000437728 SPDYE2BA6NHP3 402 aa18.89■□□□□ 0.61
RPS3AP29-201ENST00000437728 SPDYE6P0CI01 402 aa18.89■□□□□ 0.61
RPS3AP29-201ENST00000437728 SPDYE2Q495Y8 402 aa18.89■□□□□ 0.61
RPS3AP29-201ENST00000437728 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
RPS3AP29-201ENST00000437728 ZNF692Q9BU19 519 aaPredicted RBP18.8■□□□□ 0.6
RPS3AP29-201ENST00000437728 SSUH2Q9Y2M2 353 aa18.69■□□□□ 0.58
RPS3AP29-201ENST00000437728 REM2Q8IYK8 340 aaPredicted RBP18.68■□□□□ 0.58
RPS3AP29-201ENST00000437728 SPDYE4A6NLX3 237 aa18.61■□□□□ 0.57
RPS3AP29-201ENST00000437728 PABPN1Q86U42 306 aaKnown RBP eCLIP18.54■□□□□ 0.56
RPS3AP29-201ENST00000437728 CHRDL2Q6WN34 429 aa18.49■□□□□ 0.55
RPS3AP29-201ENST00000437728 PITPNM1O00562 1244 aa18.47■□□□□ 0.55
RPS3AP29-201ENST00000437728 SPDYE1Q8NFV5 336 aaPredicted RBP18.42■□□□□ 0.54
RPS3AP29-201ENST00000437728 CLEC11AQ9Y240 323 aa18.41■□□□□ 0.54
RPS3AP29-201ENST00000437728 FKBP8Q14318 412 aa18.36■□□□□ 0.53
RPS3AP29-201ENST00000437728 POTEHQ6S545 545 aa18.27■□□□□ 0.52
RPS3AP29-201ENST00000437728 PROM2Q8N271 834 aa18.2■□□□□ 0.5
RPS3AP29-201ENST00000437728 PIP4P2Q8N4L2 257 aa18.19■□□□□ 0.5
RPS3AP29-201ENST00000437728 PRR29P0C7W0 189 aa18.17■□□□□ 0.5
RPS3AP29-201ENST00000437728 FXR2P51116 673 aaKnown RBP eCLIP18.17■□□□□ 0.5
RPS3AP29-201ENST00000437728 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
RPS3AP29-201ENST00000437728 PRKAR2AP13861 404 aaKnown RBP18.02■□□□□ 0.48
RPS3AP29-201ENST00000437728 CHADLQ6NUI6 762 aa17.98■□□□□ 0.47
RPS3AP29-201ENST00000437728 CREBZFQ9NS37 354 aa17.84■□□□□ 0.45
RPS3AP29-201ENST00000437728 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
RPS3AP29-201ENST00000437728 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
RPS3AP29-201ENST00000437728 FARP1Q9Y4F1 1045 aaPredicted RBP17.74■□□□□ 0.43
RPS3AP29-201ENST00000437728 HAX1O00165 279 aa17.72■□□□□ 0.43
RPS3AP29-201ENST00000437728 MIER1Q8N108 512 aa17.71■□□□□ 0.43
RPS3AP29-201ENST00000437728 PLCD3Q8N3E9 789 aa17.66■□□□□ 0.42
RPS3AP29-201ENST00000437728 PLEKHG5O94827 1062 aa17.64■□□□□ 0.41
RPS3AP29-201ENST00000437728 MNX1P50219 401 aaPredicted RBP17.59■□□□□ 0.41
RPS3AP29-201ENST00000437728 C19orf67A6NJJ6 358 aa17.56■□□□□ 0.4
RPS3AP29-201ENST00000437728 NPM1P06748 294 aaKnown RBP eCLIP17.55■□□□□ 0.4
RPS3AP29-201ENST00000437728 VASPP50552 380 aaPredicted RBP17.53■□□□□ 0.4
RPS3AP29-201ENST00000437728 EVX2Q03828 476 aa17.52■□□□□ 0.4
RPS3AP29-201ENST00000437728 CD44P16070 742 aaKnown RBP17.48■□□□□ 0.39
RPS3AP29-201ENST00000437728 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
RPS3AP29-201ENST00000437728 SP7Q8TDD2 431 aaPredicted RBP17.41■□□□□ 0.38
RPS3AP29-201ENST00000437728 PAK3O75914 559 aaPredicted RBP17.35■□□□□ 0.37
RPS3AP29-201ENST00000437728 KLHL34Q8N239 644 aa17.35■□□□□ 0.37
RPS3AP29-201ENST00000437728 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
RPS3AP29-201ENST00000437728 TSPYL2Q9H2G4 693 aaPredicted RBP17.29■□□□□ 0.36
RPS3AP29-201ENST00000437728 IFNLR1Q8IU57 520 aaPredicted RBP17.27■□□□□ 0.36
RPS3AP29-201ENST00000437728 RASEFQ8IZ41 740 aa17.26■□□□□ 0.35
RPS3AP29-201ENST00000437728 NUBP1P53384 320 aa17.25■□□□□ 0.35
RPS3AP29-201ENST00000437728 ABCC9O60706 1549 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms