RNA–Protein interactions for RNA: ENST00000437514.1

LINC01378-202, Transcript of long intergenic non-protein coding RNA 1378, humanhuman

TSL 3 BASIC

Gene LINC01378, Length 783 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01378-202ENST00000437514 AEBP2Q6ZN18 517 aaPredicted RBP36.09■■■■□ 3.37
LINC01378-202ENST00000437514 CHIC1Q5VXU3 224 aa34.98■■■■□ 3.19
LINC01378-202ENST00000437514 SENP3Q9H4L4 574 aaPredicted RBP30.78■■■□□ 2.52
LINC01378-202ENST00000437514 PHF23Q9BUL5 403 aaPredicted RBP30.68■■■□□ 2.5
LINC01378-202ENST00000437514 FOXD1Q16676 465 aa28.56■■■□□ 2.16
LINC01378-202ENST00000437514 PLPPR3Q6T4P5 718 aa28.31■■■□□ 2.12
LINC01378-202ENST00000437514 ADRA2BP18089 450 aa27.19■■□□□ 1.94
LINC01378-202ENST00000437514 PPP6R1Q9UPN7 881 aa27.19■■□□□ 1.94
LINC01378-202ENST00000437514 PIAS4Q8N2W9 510 aaPredicted RBP26.91■■□□□ 1.9
LINC01378-202ENST00000437514 MSH5O43196 834 aa26.53■■□□□ 1.84
LINC01378-202ENST00000437514 SCAF1Q9H7N4 1312 aaKnown RBP24.98■■□□□ 1.59
LINC01378-202ENST00000437514 PPP4R3CPQ6ZMV5 832 aa24.88■■□□□ 1.57
LINC01378-202ENST00000437514 MAPK8IP2Q13387 824 aaPredicted RBP24.76■■□□□ 1.55
LINC01378-202ENST00000437514 POTEDQ86YR6 584 aa24.71■■□□□ 1.55
LINC01378-202ENST00000437514 DMRT2Q9Y5R5 561 aa24.48■■□□□ 1.51
LINC01378-202ENST00000437514 CNKSR2Q8WXI2 1034 aa24.28■■□□□ 1.48
LINC01378-202ENST00000437514 NCBP3Q53F19 620 aaKnown RBP24.2■■□□□ 1.46
LINC01378-202ENST00000437514 KCNA4P22459 653 aa23.89■■□□□ 1.41
LINC01378-202ENST00000437514 RNF216Q9NWF9 866 aaPredicted RBP23.86■■□□□ 1.41
LINC01378-202ENST00000437514 HOXD11P31277 338 aaPredicted RBP23.82■■□□□ 1.4
LINC01378-202ENST00000437514 NPM3O75607 178 aaKnown RBP23.75■■□□□ 1.39
LINC01378-202ENST00000437514 DCAF8L1A6NGE4 600 aa23.57■■□□□ 1.36
LINC01378-202ENST00000437514 DNAJC5BQ9UF47 199 aa23.04■■□□□ 1.28
LINC01378-202ENST00000437514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.82■■□□□ 1.24
LINC01378-202ENST00000437514 SLC4A1APQ9BWU0 796 aaKnown RBP22.74■■□□□ 1.23
LINC01378-202ENST00000437514 RNF39Q9H2S5 420 aa22.64■■□□□ 1.21
LINC01378-202ENST00000437514 SLC4A2P04920 1241 aa22.47■■□□□ 1.19
LINC01378-202ENST00000437514 C1QBPQ07021 282 aaKnown RBP22.41■■□□□ 1.18
LINC01378-202ENST00000437514 CACNB1Q02641 598 aaPredicted RBP22.39■■□□□ 1.17
LINC01378-202ENST00000437514 U3KPZ7 1027 aaPredicted RBP22.31■■□□□ 1.16
LINC01378-202ENST00000437514 FOXD4L1Q9NU39 408 aa22.12■■□□□ 1.13
LINC01378-202ENST00000437514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.12
LINC01378-202ENST00000437514 HNRNPUL2Q1KMD3 747 aaKnown RBP22.02■■□□□ 1.12
LINC01378-202ENST00000437514 MYCNP04198 464 aaPredicted RBP22■■□□□ 1.11
LINC01378-202ENST00000437514 ZBTB22O15209 634 aa21.92■■□□□ 1.1
LINC01378-202ENST00000437514 APLP2Q06481 763 aa21.9■■□□□ 1.1
LINC01378-202ENST00000437514 SAMD1Q6SPF0 538 aaPredicted RBP21.9■■□□□ 1.1
LINC01378-202ENST00000437514 CAPN15O75808 1086 aa21.81■■□□□ 1.08
LINC01378-202ENST00000437514 SPINK5Q9NQ38 1064 aaPredicted RBP21.8■■□□□ 1.08
LINC01378-202ENST00000437514 EHMT2Q96KQ7 1210 aa21.72■■□□□ 1.07
LINC01378-202ENST00000437514 TRHP20396 242 aaPredicted RBP21.62■■□□□ 1.05
LINC01378-202ENST00000437514 ZNF219Q9P2Y4 722 aaPredicted RBP21.59■■□□□ 1.05
LINC01378-202ENST00000437514 CSRNP3Q8WYN3 585 aa21.56■■□□□ 1.04
LINC01378-202ENST00000437514 DSG3P32926 999 aa21.45■■□□□ 1.02
LINC01378-202ENST00000437514 ATXN8OSP0DMR3 200 aa21.38■■□□□ 1.01
LINC01378-202ENST00000437514 ATF5Q9Y2D1 282 aaPredicted RBP21.36■■□□□ 1.01
LINC01378-202ENST00000437514 ABCB7O75027 752 aa21.33■■□□□ 1.01
LINC01378-202ENST00000437514 POLA2Q14181 598 aa21.16■□□□□ 0.98
LINC01378-202ENST00000437514 ZBTB12Q9Y330 459 aaPredicted RBP20.82■□□□□ 0.92
LINC01378-202ENST00000437514 FBLN2P98095 1184 aa20.62■□□□□ 0.89
LINC01378-202ENST00000437514 RBM42Q9BTD8 480 aaKnown RBP20.52■□□□□ 0.88
LINC01378-202ENST00000437514 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
LINC01378-202ENST00000437514 MKRN4PQ13434 485 aaPredicted RBP20.41■□□□□ 0.86
LINC01378-202ENST00000437514 SPDYE2BA6NHP3 402 aa20.2■□□□□ 0.82
LINC01378-202ENST00000437514 SPDYE6P0CI01 402 aa20.2■□□□□ 0.82
LINC01378-202ENST00000437514 SPDYE2Q495Y8 402 aa20.2■□□□□ 0.82
LINC01378-202ENST00000437514 AKT1S1Q96B36 256 aa20.16■□□□□ 0.82
LINC01378-202ENST00000437514 ZNF692Q9BU19 519 aaPredicted RBP20.11■□□□□ 0.81
LINC01378-202ENST00000437514 REM2Q8IYK8 340 aaPredicted RBP19.95■□□□□ 0.78
LINC01378-202ENST00000437514 SSUH2Q9Y2M2 353 aa19.94■□□□□ 0.78
LINC01378-202ENST00000437514 SPDYE4A6NLX3 237 aa19.88■□□□□ 0.77
LINC01378-202ENST00000437514 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
LINC01378-202ENST00000437514 CHRDL2Q6WN34 429 aa19.76■□□□□ 0.75
LINC01378-202ENST00000437514 PITPNM1O00562 1244 aa19.71■□□□□ 0.75
LINC01378-202ENST00000437514 SPDYE1Q8NFV5 336 aaPredicted RBP19.71■□□□□ 0.75
LINC01378-202ENST00000437514 CLEC11AQ9Y240 323 aa19.67■□□□□ 0.74
LINC01378-202ENST00000437514 FKBP8Q14318 412 aa19.58■□□□□ 0.72
LINC01378-202ENST00000437514 POTEHQ6S545 545 aa19.52■□□□□ 0.72
LINC01378-202ENST00000437514 STAG3Q9UJ98 1225 aa19.45■□□□□ 0.7
LINC01378-202ENST00000437514 PRR29P0C7W0 189 aa19.44■□□□□ 0.7
LINC01378-202ENST00000437514 PIP4P2Q8N4L2 257 aa19.42■□□□□ 0.7
LINC01378-202ENST00000437514 FXR2P51116 673 aaKnown RBP eCLIP19.41■□□□□ 0.7
LINC01378-202ENST00000437514 PROM2Q8N271 834 aa19.39■□□□□ 0.69
LINC01378-202ENST00000437514 PRKAR2AP13861 404 aaKnown RBP19.26■□□□□ 0.67
LINC01378-202ENST00000437514 CHADLQ6NUI6 762 aa19.16■□□□□ 0.66
LINC01378-202ENST00000437514 CREBZFQ9NS37 354 aa19.03■□□□□ 0.64
LINC01378-202ENST00000437514 FBXO3Q9UK99 471 aa19.02■□□□□ 0.64
LINC01378-202ENST00000437514 HAX1O00165 279 aa18.97■□□□□ 0.63
LINC01378-202ENST00000437514 FARP1Q9Y4F1 1045 aaPredicted RBP18.96■□□□□ 0.63
LINC01378-202ENST00000437514 PLEKHG5O94827 1062 aa18.94■□□□□ 0.62
LINC01378-202ENST00000437514 MIER1Q8N108 512 aa18.94■□□□□ 0.62
LINC01378-202ENST00000437514 PLCD3Q8N3E9 789 aa18.88■□□□□ 0.61
LINC01378-202ENST00000437514 NPM1P06748 294 aaKnown RBP eCLIP18.8■□□□□ 0.6
LINC01378-202ENST00000437514 C19orf67A6NJJ6 358 aa18.75■□□□□ 0.59
LINC01378-202ENST00000437514 MNX1P50219 401 aaPredicted RBP18.74■□□□□ 0.59
LINC01378-202ENST00000437514 VASPP50552 380 aaPredicted RBP18.71■□□□□ 0.59
LINC01378-202ENST00000437514 ZBTB47Q9UFB7 747 aaPredicted RBP18.7■□□□□ 0.58
LINC01378-202ENST00000437514 CD44P16070 742 aaKnown RBP18.69■□□□□ 0.58
LINC01378-202ENST00000437514 EVX2Q03828 476 aa18.66■□□□□ 0.58
LINC01378-202ENST00000437514 SP7Q8TDD2 431 aaPredicted RBP18.62■□□□□ 0.57
LINC01378-202ENST00000437514 PAK3O75914 559 aaPredicted RBP18.6■□□□□ 0.57
LINC01378-202ENST00000437514 KLHL34Q8N239 644 aa18.57■□□□□ 0.56
LINC01378-202ENST00000437514 ZRANB1Q9UGI0 708 aa18.55■□□□□ 0.56
LINC01378-202ENST00000437514 TSPYL2Q9H2G4 693 aaPredicted RBP18.46■□□□□ 0.55
LINC01378-202ENST00000437514 IFNLR1Q8IU57 520 aaPredicted RBP18.4■□□□□ 0.54
LINC01378-202ENST00000437514 RASEFQ8IZ41 740 aa18.4■□□□□ 0.54
LINC01378-202ENST00000437514 NUBP1P53384 320 aa18.39■□□□□ 0.53
LINC01378-202ENST00000437514 ZNF579Q8NAF0 562 aaKnown RBP18.39■□□□□ 0.53
LINC01378-202ENST00000437514 GABBR2O75899 941 aa18.34■□□□□ 0.53
LINC01378-202ENST00000437514 CLCN6P51797 869 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms