RNA–Protein interactions for RNA: ENST00000437508.6

TRIM2-203, Transcript of tripartite motif containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM2, Length 3,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-203ENST00000437508 NISCHQ9Y2I1 1504 aa14.81□□□□□ -0.04
TRIM2-203ENST00000437508 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
TRIM2-203ENST00000437508 SHROOM4Q9ULL8 1493 aa13.59□□□□□ -0.23
TRIM2-203ENST00000437508 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
TRIM2-203ENST00000437508 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
TRIM2-203ENST00000437508 FAM9AQ8IZU1 332 aaPredicted RBP12.82□□□□□ -0.36
TRIM2-203ENST00000437508 CCDC180Q9P1Z9 1646 aa12.74□□□□□ -0.37
TRIM2-203ENST00000437508 TTBK1Q5TCY1 1321 aaPredicted RBP12.63□□□□□ -0.39
TRIM2-203ENST00000437508 RANGAP1P46060 587 aaPredicted RBP12.61□□□□□ -0.39
TRIM2-203ENST00000437508 ABCC9O60706 1549 aa12.45□□□□□ -0.42
TRIM2-203ENST00000437508 ZCCHC6Q5VYS8 1495 aaKnown RBP12.41□□□□□ -0.42
TRIM2-203ENST00000437508 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRIM2-203ENST00000437508 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
TRIM2-203ENST00000437508 PPARGC1BQ86YN6 1023 aaKnown RBP12.31□□□□□ -0.44
TRIM2-203ENST00000437508 ATP1B4Q9UN42 357 aaPredicted RBP12.28□□□□□ -0.44
TRIM2-203ENST00000437508 PCGF6Q9BYE7 350 aa12.27□□□□□ -0.44
TRIM2-203ENST00000437508 APLP2Q06481 763 aa12.25□□□□□ -0.45
TRIM2-203ENST00000437508 UBTFP17480 764 aaKnown RBP12.22□□□□□ -0.45
TRIM2-203ENST00000437508 LOC105371045A0A1W2PR82 267 aa12.17□□□□□ -0.46
TRIM2-203ENST00000437508 DCAF1Q9Y4B6 1507 aa12.1□□□□□ -0.47
TRIM2-203ENST00000437508 CHIC1Q5VXU3 224 aa12.05□□□□□ -0.48
TRIM2-203ENST00000437508 SCRIBQ14160 1630 aa11.97□□□□□ -0.49
TRIM2-203ENST00000437508 NACADO15069 1562 aa11.95□□□□□ -0.5
TRIM2-203ENST00000437508 MYO15BQ96JP2 1530 aa11.93□□□□□ -0.5
TRIM2-203ENST00000437508 ITGAEP38570 1179 aa11.91□□□□□ -0.5
TRIM2-203ENST00000437508 RB1CC1Q8TDY2 1594 aa11.89□□□□□ -0.51
TRIM2-203ENST00000437508 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
TRIM2-203ENST00000437508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.87□□□□□ -0.51
TRIM2-203ENST00000437508 HNRNPUL2Q1KMD3 747 aaKnown RBP11.87□□□□□ -0.51
TRIM2-203ENST00000437508 FBLN2P98095 1184 aa11.74□□□□□ -0.53
TRIM2-203ENST00000437508 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
TRIM2-203ENST00000437508 ARID3CA6NKF2 412 aa11.69□□□□□ -0.54
TRIM2-203ENST00000437508 P3H3Q8IVL6 736 aa11.66□□□□□ -0.54
TRIM2-203ENST00000437508 CNGB1Q14028 1251 aaPredicted RBP11.63□□□□□ -0.55
TRIM2-203ENST00000437508 CECR2Q9BXF3 1484 aa11.63□□□□□ -0.55
TRIM2-203ENST00000437508 UNC13AQ9UPW8 1703 aa11.6□□□□□ -0.55
TRIM2-203ENST00000437508 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
TRIM2-203ENST00000437508 YTHDC1Q96MU7 727 aaKnown RBP11.56□□□□□ -0.56
TRIM2-203ENST00000437508 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
TRIM2-203ENST00000437508 POLR3GLQ9BT43 218 aa11.54□□□□□ -0.56
TRIM2-203ENST00000437508 BICRAQ9NZM4 1560 aa11.54□□□□□ -0.56
TRIM2-203ENST00000437508 FAM50AQ14320 339 aaKnown RBP11.52□□□□□ -0.57
TRIM2-203ENST00000437508 MROH2BQ7Z745 1585 aa11.51□□□□□ -0.57
TRIM2-203ENST00000437508 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
TRIM2-203ENST00000437508 PELP1Q8IZL8 1130 aaKnown RBP11.44□□□□□ -0.58
TRIM2-203ENST00000437508 ZEB1P37275 1124 aaPredicted RBP11.42□□□□□ -0.58
TRIM2-203ENST00000437508 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
TRIM2-203ENST00000437508 HRCP23327 699 aa11.42□□□□□ -0.58
TRIM2-203ENST00000437508 WIZO95785 1651 aa11.4□□□□□ -0.59
TRIM2-203ENST00000437508 NEUROD1Q13562 356 aa11.38□□□□□ -0.59
TRIM2-203ENST00000437508 TRIM52Q96A61 297 aa11.36□□□□□ -0.59
TRIM2-203ENST00000437508 SMARCA4P51532 1647 aa11.36□□□□□ -0.59
TRIM2-203ENST00000437508 ZNF777Q9ULD5 760 aaPredicted RBP11.33□□□□□ -0.6
TRIM2-203ENST00000437508 ZNF326Q5BKZ1 582 aaKnown RBP11.31□□□□□ -0.6
TRIM2-203ENST00000437508 SLC4A1APQ9BWU0 796 aaKnown RBP11.26□□□□□ -0.61
TRIM2-203ENST00000437508 PLPPR3Q6T4P5 718 aa11.26□□□□□ -0.61
TRIM2-203ENST00000437508 ATAD2BQ9ULI0 1458 aa11.24□□□□□ -0.61
TRIM2-203ENST00000437508 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
TRIM2-203ENST00000437508 CENPBP07199 599 aaPredicted RBP11.23□□□□□ -0.61
TRIM2-203ENST00000437508 MYT1Q01538 1121 aa11.22□□□□□ -0.61
TRIM2-203ENST00000437508 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
TRIM2-203ENST00000437508 TOP2AP11388 1531 aaKnown RBP11.2□□□□□ -0.62
TRIM2-203ENST00000437508 CHIC2Q9UKJ5 165 aa11.19□□□□□ -0.62
TRIM2-203ENST00000437508 CCDC88BA6NC98 1476 aa11.18□□□□□ -0.62
TRIM2-203ENST00000437508 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
TRIM2-203ENST00000437508 SENP3Q9H4L4 574 aaPredicted RBP11.17□□□□□ -0.62
TRIM2-203ENST00000437508 SMARCA2P51531 1590 aa11.16□□□□□ -0.62
TRIM2-203ENST00000437508 PEG3Q9GZU2 1588 aa11.13□□□□□ -0.63
TRIM2-203ENST00000437508 KCNH8Q96L42 1107 aa11.11□□□□□ -0.63
TRIM2-203ENST00000437508 DIEXFQ68CQ4 756 aaKnown RBP11.1□□□□□ -0.63
TRIM2-203ENST00000437508 NCAPD3P42695 1498 aa11.09□□□□□ -0.63
TRIM2-203ENST00000437508 CC2D2AQ9P2K1 1620 aa11.08□□□□□ -0.64
TRIM2-203ENST00000437508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRIM2-203ENST00000437508 DNAJC5BQ9UF47 199 aa11.06□□□□□ -0.64
TRIM2-203ENST00000437508 CHGAP10645 457 aaKnown RBP11.05□□□□□ -0.64
TRIM2-203ENST00000437508 BCANQ96GW7 911 aa11.05□□□□□ -0.64
TRIM2-203ENST00000437508 WRNQ14191 1432 aaPredicted RBP eCLIP11.05□□□□□ -0.64
TRIM2-203ENST00000437508 NEFLP07196 543 aa11.05□□□□□ -0.64
TRIM2-203ENST00000437508 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRIM2-203ENST00000437508 CDK11AQ9UQ88 783 aaPredicted RBP11.03□□□□□ -0.64
TRIM2-203ENST00000437508 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
TRIM2-203ENST00000437508 HMGXB3Q12766 1538 aa11.01□□□□□ -0.65
TRIM2-203ENST00000437508 ABCC8Q09428 1581 aa11.01□□□□□ -0.65
TRIM2-203ENST00000437508 RRP7BPQ9NSQ0 103 aa11□□□□□ -0.65
TRIM2-203ENST00000437508 SOGA1O94964 1423 aa11□□□□□ -0.65
TRIM2-203ENST00000437508 CLIP1P30622 1438 aa10.99□□□□□ -0.65
TRIM2-203ENST00000437508 ERCC6Q03468 1493 aa10.97□□□□□ -0.65
TRIM2-203ENST00000437508 MTUS2Q5JR59 1369 aa10.96□□□□□ -0.65
TRIM2-203ENST00000437508 TDRD9Q8NDG6 1382 aaKnown RBP10.95□□□□□ -0.66
TRIM2-203ENST00000437508 KDM2AQ9Y2K7 1162 aa10.95□□□□□ -0.66
TRIM2-203ENST00000437508 CEP162Q5TB80 1403 aa10.92□□□□□ -0.66
TRIM2-203ENST00000437508 BCL11AQ9H165 835 aa10.9□□□□□ -0.66
TRIM2-203ENST00000437508 ESF1Q9H501 851 aaKnown RBP10.9□□□□□ -0.66
TRIM2-203ENST00000437508 SENP3-EIF4A1A0A087X0R7 540 aa10.9□□□□□ -0.67
TRIM2-203ENST00000437508 TSPY4P0CV99 314 aa10.9□□□□□ -0.67
TRIM2-203ENST00000437508 TSPY10P0CW01 314 aa10.9□□□□□ -0.67
TRIM2-203ENST00000437508 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
TRIM2-203ENST00000437508 ZNF316A6NFI3 1004 aaPredicted RBP10.89□□□□□ -0.67
TRIM2-203ENST00000437508 STAG3Q9UJ98 1225 aa10.89□□□□□ -0.67
TRIM2-203ENST00000437508 CADPSQ9ULU8 1353 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms