RNA–Protein interactions for RNA: ENST00000436829.1

MINDY3-204, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 5

Gene MINDY3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-204ENST00000436829 AEBP2Q6ZN18 517 aaPredicted RBP26.83■■□□□ 1.89
MINDY3-204ENST00000436829 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
MINDY3-204ENST00000436829 SENP3Q9H4L4 574 aaPredicted RBP23.02■■□□□ 1.28
MINDY3-204ENST00000436829 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
MINDY3-204ENST00000436829 FOXD1Q16676 465 aa21.35■■□□□ 1.01
MINDY3-204ENST00000436829 PLPPR3Q6T4P5 718 aa20.62■□□□□ 0.89
MINDY3-204ENST00000436829 MSH5O43196 834 aa20.06■□□□□ 0.8
MINDY3-204ENST00000436829 PIAS4Q8N2W9 510 aaPredicted RBP20.04■□□□□ 0.8
MINDY3-204ENST00000436829 PPP6R1Q9UPN7 881 aa19.99■□□□□ 0.79
MINDY3-204ENST00000436829 ADRA2BP18089 450 aa19.97■□□□□ 0.79
MINDY3-204ENST00000436829 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
MINDY3-204ENST00000436829 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
MINDY3-204ENST00000436829 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
MINDY3-204ENST00000436829 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
MINDY3-204ENST00000436829 PPP4R3CPQ6ZMV5 832 aa18.04■□□□□ 0.48
MINDY3-204ENST00000436829 CNKSR2Q8WXI2 1034 aa17.72■□□□□ 0.43
MINDY3-204ENST00000436829 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
MINDY3-204ENST00000436829 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
MINDY3-204ENST00000436829 RNF216Q9NWF9 866 aaPredicted RBP17.52■□□□□ 0.4
MINDY3-204ENST00000436829 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
MINDY3-204ENST00000436829 KCNA4P22459 653 aa17.29■□□□□ 0.36
MINDY3-204ENST00000436829 CACNB1Q02641 598 aaPredicted RBP17.15■□□□□ 0.34
MINDY3-204ENST00000436829 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
MINDY3-204ENST00000436829 RNF39Q9H2S5 420 aa17.05■□□□□ 0.32
MINDY3-204ENST00000436829 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
MINDY3-204ENST00000436829 C1QBPQ07021 282 aaKnown RBP16.88■□□□□ 0.29
MINDY3-204ENST00000436829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.29
MINDY3-204ENST00000436829 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
MINDY3-204ENST00000436829 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
MINDY3-204ENST00000436829 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
MINDY3-204ENST00000436829 CAPN15O75808 1086 aa16.18■□□□□ 0.18
MINDY3-204ENST00000436829 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
MINDY3-204ENST00000436829 APLP2Q06481 763 aa16.15■□□□□ 0.18
MINDY3-204ENST00000436829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
MINDY3-204ENST00000436829 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
MINDY3-204ENST00000436829 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
MINDY3-204ENST00000436829 DSG3P32926 999 aa16■□□□□ 0.15
MINDY3-204ENST00000436829 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
MINDY3-204ENST00000436829 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
MINDY3-204ENST00000436829 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
MINDY3-204ENST00000436829 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
MINDY3-204ENST00000436829 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
MINDY3-204ENST00000436829 ZBTB22O15209 634 aa15.88■□□□□ 0.13
MINDY3-204ENST00000436829 MYCNP04198 464 aaPredicted RBP15.88■□□□□ 0.13
MINDY3-204ENST00000436829 ABCB7O75027 752 aa15.75■□□□□ 0.11
MINDY3-204ENST00000436829 POLA2Q14181 598 aa15.51■□□□□ 0.07
MINDY3-204ENST00000436829 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
MINDY3-204ENST00000436829 ATF5Q9Y2D1 282 aaPredicted RBP15.37■□□□□ 0.05
MINDY3-204ENST00000436829 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
MINDY3-204ENST00000436829 ZBTB12Q9Y330 459 aaPredicted RBP15.3■□□□□ 0.04
MINDY3-204ENST00000436829 POTEHQ6S545 545 aa15.19■□□□□ 0.02
MINDY3-204ENST00000436829 AKT1S1Q96B36 256 aa15□□□□□ -0.01
MINDY3-204ENST00000436829 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
MINDY3-204ENST00000436829 FBLN2P98095 1184 aa14.95□□□□□ -0.02
MINDY3-204ENST00000436829 CHRDL2Q6WN34 429 aa14.92□□□□□ -0.02
MINDY3-204ENST00000436829 REM2Q8IYK8 340 aaPredicted RBP14.81□□□□□ -0.04
MINDY3-204ENST00000436829 SPDYE2BA6NHP3 402 aa14.78□□□□□ -0.04
MINDY3-204ENST00000436829 SPDYE6P0CI01 402 aa14.78□□□□□ -0.04
MINDY3-204ENST00000436829 SPDYE2Q495Y8 402 aa14.78□□□□□ -0.04
MINDY3-204ENST00000436829 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
MINDY3-204ENST00000436829 PITPNM1O00562 1244 aa14.63□□□□□ -0.07
MINDY3-204ENST00000436829 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
MINDY3-204ENST00000436829 PIP4P2Q8N4L2 257 aa14.55□□□□□ -0.08
MINDY3-204ENST00000436829 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
MINDY3-204ENST00000436829 SPDYE1Q8NFV5 336 aaPredicted RBP14.52□□□□□ -0.09
MINDY3-204ENST00000436829 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
MINDY3-204ENST00000436829 CLEC11AQ9Y240 323 aa14.48□□□□□ -0.09
MINDY3-204ENST00000436829 FKBP8Q14318 412 aa14.4□□□□□ -0.1
MINDY3-204ENST00000436829 PABPN1Q86U42 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
MINDY3-204ENST00000436829 HAX1O00165 279 aa14.34□□□□□ -0.11
MINDY3-204ENST00000436829 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
MINDY3-204ENST00000436829 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
MINDY3-204ENST00000436829 SPDYE4A6NLX3 237 aa14.28□□□□□ -0.12
MINDY3-204ENST00000436829 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
MINDY3-204ENST00000436829 CHADLQ6NUI6 762 aa14.11□□□□□ -0.15
MINDY3-204ENST00000436829 STAG3Q9UJ98 1225 aa14.1□□□□□ -0.15
MINDY3-204ENST00000436829 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
MINDY3-204ENST00000436829 EVX2Q03828 476 aa14.03□□□□□ -0.16
MINDY3-204ENST00000436829 PROM2Q8N271 834 aa13.99□□□□□ -0.17
MINDY3-204ENST00000436829 FARP1Q9Y4F1 1045 aaPredicted RBP13.95□□□□□ -0.18
MINDY3-204ENST00000436829 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
MINDY3-204ENST00000436829 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
MINDY3-204ENST00000436829 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
MINDY3-204ENST00000436829 GABBR2O75899 941 aa13.8□□□□□ -0.2
MINDY3-204ENST00000436829 CLCN6P51797 869 aa13.77□□□□□ -0.21
MINDY3-204ENST00000436829 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
MINDY3-204ENST00000436829 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
MINDY3-204ENST00000436829 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
MINDY3-204ENST00000436829 VASPP50552 380 aaPredicted RBP13.65□□□□□ -0.22
MINDY3-204ENST00000436829 ZNF579Q8NAF0 562 aaKnown RBP13.63□□□□□ -0.23
MINDY3-204ENST00000436829 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
MINDY3-204ENST00000436829 MNX1P50219 401 aaPredicted RBP13.57□□□□□ -0.24
MINDY3-204ENST00000436829 MIER1Q8N108 512 aa13.56□□□□□ -0.24
MINDY3-204ENST00000436829 PLCD3Q8N3E9 789 aa13.55□□□□□ -0.24
MINDY3-204ENST00000436829 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
MINDY3-204ENST00000436829 IFNLR1Q8IU57 520 aaPredicted RBP13.47□□□□□ -0.25
MINDY3-204ENST00000436829 KLHL34Q8N239 644 aa13.46□□□□□ -0.25
MINDY3-204ENST00000436829 PHF12Q96QT6 1004 aa13.44□□□□□ -0.26
MINDY3-204ENST00000436829 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
MINDY3-204ENST00000436829 GALR2O43603 387 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms