RNA–Protein interactions for RNA: ENST00000436722.1

LINC00411-201, long intergenic non-protein coding RNA 411, humanhuman

TSL 3 BASIC

Gene LINC00411, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00411-201ENST00000436722 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
LINC00411-201ENST00000436722 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
LINC00411-201ENST00000436722 SENP3Q9H4L4 574 aaPredicted RBP25.45■■□□□ 1.66
LINC00411-201ENST00000436722 PHF23Q9BUL5 403 aaPredicted RBP25.09■■□□□ 1.61
LINC00411-201ENST00000436722 FOXD1Q16676 465 aa23.79■■□□□ 1.4
LINC00411-201ENST00000436722 POTEDQ86YR6 584 aa22.57■■□□□ 1.2
LINC00411-201ENST00000436722 MSH5O43196 834 aa22.41■■□□□ 1.18
LINC00411-201ENST00000436722 PIAS4Q8N2W9 510 aaPredicted RBP22.13■■□□□ 1.13
LINC00411-201ENST00000436722 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
LINC00411-201ENST00000436722 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
LINC00411-201ENST00000436722 ADRA2BP18089 450 aa21.85■■□□□ 1.09
LINC00411-201ENST00000436722 MAPK8IP2Q13387 824 aaPredicted RBP20.2■□□□□ 0.82
LINC00411-201ENST00000436722 DMRT2Q9Y5R5 561 aa20.12■□□□□ 0.81
LINC00411-201ENST00000436722 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
LINC00411-201ENST00000436722 CACNB1Q02641 598 aaPredicted RBP19.51■□□□□ 0.71
LINC00411-201ENST00000436722 DCAF8L1A6NGE4 600 aa19.37■□□□□ 0.69
LINC00411-201ENST00000436722 PPP4R3CPQ6ZMV5 832 aa19.33■□□□□ 0.68
LINC00411-201ENST00000436722 HOXD11P31277 338 aaPredicted RBP19.22■□□□□ 0.67
LINC00411-201ENST00000436722 RNF39Q9H2S5 420 aa19.07■□□□□ 0.64
LINC00411-201ENST00000436722 CNKSR2Q8WXI2 1034 aa19.05■□□□□ 0.64
LINC00411-201ENST00000436722 RNF216Q9NWF9 866 aaPredicted RBP18.97■□□□□ 0.63
LINC00411-201ENST00000436722 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
LINC00411-201ENST00000436722 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
LINC00411-201ENST00000436722 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
LINC00411-201ENST00000436722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.53
LINC00411-201ENST00000436722 NPM3O75607 178 aaKnown RBP18.18■□□□□ 0.5
LINC00411-201ENST00000436722 U3KPZ7 1027 aaPredicted RBP17.89■□□□□ 0.45
LINC00411-201ENST00000436722 CAPN15O75808 1086 aa17.77■□□□□ 0.44
LINC00411-201ENST00000436722 SPINK5Q9NQ38 1064 aaPredicted RBP17.77■□□□□ 0.44
LINC00411-201ENST00000436722 DSG3P32926 999 aa17.74■□□□□ 0.43
LINC00411-201ENST00000436722 POTEHQ6S545 545 aa17.61■□□□□ 0.41
LINC00411-201ENST00000436722 KCNA4P22459 653 aa17.48■□□□□ 0.39
LINC00411-201ENST00000436722 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
LINC00411-201ENST00000436722 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
LINC00411-201ENST00000436722 APLP2Q06481 763 aa17.35■□□□□ 0.37
LINC00411-201ENST00000436722 ABCB7O75027 752 aa17.33■□□□□ 0.36
LINC00411-201ENST00000436722 ZNF219Q9P2Y4 722 aaPredicted RBP17.31■□□□□ 0.36
LINC00411-201ENST00000436722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
LINC00411-201ENST00000436722 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
LINC00411-201ENST00000436722 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
LINC00411-201ENST00000436722 RBM42Q9BTD8 480 aaKnown RBP16.93■□□□□ 0.3
LINC00411-201ENST00000436722 POLA2Q14181 598 aa16.83■□□□□ 0.28
LINC00411-201ENST00000436722 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
LINC00411-201ENST00000436722 CHRDL2Q6WN34 429 aa16.73■□□□□ 0.27
LINC00411-201ENST00000436722 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
LINC00411-201ENST00000436722 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
LINC00411-201ENST00000436722 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
LINC00411-201ENST00000436722 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
LINC00411-201ENST00000436722 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
LINC00411-201ENST00000436722 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
LINC00411-201ENST00000436722 SP7Q8TDD2 431 aaPredicted RBP16.31■□□□□ 0.2
LINC00411-201ENST00000436722 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
LINC00411-201ENST00000436722 PIP4P2Q8N4L2 257 aa16.24■□□□□ 0.19
LINC00411-201ENST00000436722 PITPNM1O00562 1244 aa16.14■□□□□ 0.17
LINC00411-201ENST00000436722 HAX1O00165 279 aa16.1■□□□□ 0.17
LINC00411-201ENST00000436722 FXR2P51116 673 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC00411-201ENST00000436722 ZBTB22O15209 634 aa16.05■□□□□ 0.16
LINC00411-201ENST00000436722 ATXN8OSP0DMR3 200 aa15.95■□□□□ 0.14
LINC00411-201ENST00000436722 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
LINC00411-201ENST00000436722 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
LINC00411-201ENST00000436722 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
LINC00411-201ENST00000436722 FBLN2P98095 1184 aa15.87■□□□□ 0.13
LINC00411-201ENST00000436722 EVX2Q03828 476 aa15.85■□□□□ 0.13
LINC00411-201ENST00000436722 CLEC11AQ9Y240 323 aa15.75■□□□□ 0.11
LINC00411-201ENST00000436722 PRKAR2AP13861 404 aaKnown RBP15.73■□□□□ 0.11
LINC00411-201ENST00000436722 SPDYE1Q8NFV5 336 aaPredicted RBP15.72■□□□□ 0.11
LINC00411-201ENST00000436722 MKRN4PQ13434 485 aaPredicted RBP15.69■□□□□ 0.1
LINC00411-201ENST00000436722 ZNF692Q9BU19 519 aaPredicted RBP15.66■□□□□ 0.1
LINC00411-201ENST00000436722 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
LINC00411-201ENST00000436722 C19orf67A6NJJ6 358 aa15.58■□□□□ 0.08
LINC00411-201ENST00000436722 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
LINC00411-201ENST00000436722 GABBR2O75899 941 aa15.47■□□□□ 0.07
LINC00411-201ENST00000436722 PRR29P0C7W0 189 aa15.42■□□□□ 0.06
LINC00411-201ENST00000436722 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
LINC00411-201ENST00000436722 LHX8Q68G74 356 aa15.32■□□□□ 0.04
LINC00411-201ENST00000436722 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
LINC00411-201ENST00000436722 FARP1Q9Y4F1 1045 aaPredicted RBP15.19■□□□□ 0.02
LINC00411-201ENST00000436722 POTEIP0CG38 1075 aa15.12■□□□□ 0.01
LINC00411-201ENST00000436722 CLCN6P51797 869 aa15.06■□□□□ 0
LINC00411-201ENST00000436722 DCBLD2Q96PD2 775 aa14.98□□□□□ -0.01
LINC00411-201ENST00000436722 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
LINC00411-201ENST00000436722 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
LINC00411-201ENST00000436722 ZNF579Q8NAF0 562 aaKnown RBP14.93□□□□□ -0.02
LINC00411-201ENST00000436722 CREBZFQ9NS37 354 aa14.92□□□□□ -0.02
LINC00411-201ENST00000436722 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
LINC00411-201ENST00000436722 GALR2O43603 387 aaPredicted RBP14.8□□□□□ -0.04
LINC00411-201ENST00000436722 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
LINC00411-201ENST00000436722 PAK3O75914 559 aaPredicted RBP14.73□□□□□ -0.05
LINC00411-201ENST00000436722 PHF12Q96QT6 1004 aa14.69□□□□□ -0.06
LINC00411-201ENST00000436722 PLSCR2Q9NRY7 297 aa14.69□□□□□ -0.06
LINC00411-201ENST00000436722 OTUD5Q96G74 571 aa14.65□□□□□ -0.06
LINC00411-201ENST00000436722 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
LINC00411-201ENST00000436722 POTEB2H3BUK9 544 aa14.63□□□□□ -0.07
LINC00411-201ENST00000436722 MNX1P50219 401 aaPredicted RBP14.6□□□□□ -0.07
LINC00411-201ENST00000436722 PELP1Q8IZL8 1130 aaKnown RBP14.56□□□□□ -0.08
LINC00411-201ENST00000436722 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
LINC00411-201ENST00000436722 MS4A3Q96HJ5 214 aa14.47□□□□□ -0.09
LINC00411-201ENST00000436722 ASTLQ6HA08 431 aaPredicted RBP14.45□□□□□ -0.1
LINC00411-201ENST00000436722 POTEMA6NI47 508 aa14.43□□□□□ -0.1
LINC00411-201ENST00000436722 METRNQ9UJH8 293 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms