RNA–Protein interactions for RNA: ENST00000436366.1

UBE2FP3-201, Transcript of UBE2F pseudogene 3, humanhuman

BASIC

Gene UBE2FP3, Length 524 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FP3-201ENST00000436366 AEBP2Q6ZN18 517 aaPredicted RBP20.32■□□□□ 0.84
UBE2FP3-201ENST00000436366 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
UBE2FP3-201ENST00000436366 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
UBE2FP3-201ENST00000436366 SENP3Q9H4L4 574 aaPredicted RBP17.12■□□□□ 0.33
UBE2FP3-201ENST00000436366 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
UBE2FP3-201ENST00000436366 FOXD1Q16676 465 aa15.93■□□□□ 0.14
UBE2FP3-201ENST00000436366 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
UBE2FP3-201ENST00000436366 ADRA2BP18089 450 aa15.44■□□□□ 0.06
UBE2FP3-201ENST00000436366 PIAS4Q8N2W9 510 aaPredicted RBP15.05■□□□□ -0
UBE2FP3-201ENST00000436366 MSH5O43196 834 aa14.56□□□□□ -0.08
UBE2FP3-201ENST00000436366 PPP4R3CPQ6ZMV5 832 aa14.31□□□□□ -0.12
UBE2FP3-201ENST00000436366 KCNA4P22459 653 aa14.18□□□□□ -0.14
UBE2FP3-201ENST00000436366 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
UBE2FP3-201ENST00000436366 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
UBE2FP3-201ENST00000436366 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
UBE2FP3-201ENST00000436366 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
UBE2FP3-201ENST00000436366 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
UBE2FP3-201ENST00000436366 DMRT2Q9Y5R5 561 aa13.71□□□□□ -0.21
UBE2FP3-201ENST00000436366 RNF216Q9NWF9 866 aaPredicted RBP13.55□□□□□ -0.24
UBE2FP3-201ENST00000436366 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
UBE2FP3-201ENST00000436366 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
UBE2FP3-201ENST00000436366 EHMT2Q96KQ7 1210 aa13.31□□□□□ -0.28
UBE2FP3-201ENST00000436366 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
UBE2FP3-201ENST00000436366 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
UBE2FP3-201ENST00000436366 ZBTB22O15209 634 aa13.1□□□□□ -0.31
UBE2FP3-201ENST00000436366 POTEDQ86YR6 584 aa13.09□□□□□ -0.31
UBE2FP3-201ENST00000436366 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
UBE2FP3-201ENST00000436366 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
UBE2FP3-201ENST00000436366 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
UBE2FP3-201ENST00000436366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
UBE2FP3-201ENST00000436366 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
UBE2FP3-201ENST00000436366 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
UBE2FP3-201ENST00000436366 RNF39Q9H2S5 420 aa12.54□□□□□ -0.4
UBE2FP3-201ENST00000436366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
UBE2FP3-201ENST00000436366 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
UBE2FP3-201ENST00000436366 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
UBE2FP3-201ENST00000436366 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
UBE2FP3-201ENST00000436366 ATXN8OSP0DMR3 200 aa12.43□□□□□ -0.42
UBE2FP3-201ENST00000436366 C1QBPQ07021 282 aaKnown RBP12.34□□□□□ -0.43
UBE2FP3-201ENST00000436366 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
UBE2FP3-201ENST00000436366 APLP2Q06481 763 aa12.27□□□□□ -0.45
UBE2FP3-201ENST00000436366 CAPN15O75808 1086 aa12.2□□□□□ -0.46
UBE2FP3-201ENST00000436366 TRHP20396 242 aaPredicted RBP12.19□□□□□ -0.46
UBE2FP3-201ENST00000436366 ZNF219Q9P2Y4 722 aaPredicted RBP12.15□□□□□ -0.46
UBE2FP3-201ENST00000436366 CACNB1Q02641 598 aaPredicted RBP12.08□□□□□ -0.48
UBE2FP3-201ENST00000436366 ABCB7O75027 752 aa12.03□□□□□ -0.48
UBE2FP3-201ENST00000436366 POLA2Q14181 598 aa12□□□□□ -0.49
UBE2FP3-201ENST00000436366 DSG3P32926 999 aa11.99□□□□□ -0.49
UBE2FP3-201ENST00000436366 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
UBE2FP3-201ENST00000436366 FKBP8Q14318 412 aa11.8□□□□□ -0.52
UBE2FP3-201ENST00000436366 FBLN2P98095 1184 aa11.78□□□□□ -0.52
UBE2FP3-201ENST00000436366 ZBTB12Q9Y330 459 aaPredicted RBP11.75□□□□□ -0.53
UBE2FP3-201ENST00000436366 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
UBE2FP3-201ENST00000436366 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
UBE2FP3-201ENST00000436366 SPDYE2BA6NHP3 402 aa11.48□□□□□ -0.57
UBE2FP3-201ENST00000436366 SPDYE6P0CI01 402 aa11.48□□□□□ -0.57
UBE2FP3-201ENST00000436366 SPDYE2Q495Y8 402 aa11.48□□□□□ -0.57
UBE2FP3-201ENST00000436366 PROM2Q8N271 834 aa11.48□□□□□ -0.57
UBE2FP3-201ENST00000436366 ZNF692Q9BU19 519 aaPredicted RBP11.46□□□□□ -0.57
UBE2FP3-201ENST00000436366 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.57
UBE2FP3-201ENST00000436366 PABPN1Q86U42 306 aaKnown RBP eCLIP11.35□□□□□ -0.59
UBE2FP3-201ENST00000436366 RBM42Q9BTD8 480 aaKnown RBP11.35□□□□□ -0.59
UBE2FP3-201ENST00000436366 AKT1S1Q96B36 256 aa11.25□□□□□ -0.61
UBE2FP3-201ENST00000436366 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
UBE2FP3-201ENST00000436366 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
UBE2FP3-201ENST00000436366 VASPP50552 380 aaPredicted RBP11.17□□□□□ -0.62
UBE2FP3-201ENST00000436366 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
UBE2FP3-201ENST00000436366 STAG3Q9UJ98 1225 aa11.1□□□□□ -0.63
UBE2FP3-201ENST00000436366 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
UBE2FP3-201ENST00000436366 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
UBE2FP3-201ENST00000436366 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
UBE2FP3-201ENST00000436366 RTN4Q9NQC3 1192 aaKnown RBP11□□□□□ -0.65
UBE2FP3-201ENST00000436366 PLCD3Q8N3E9 789 aa10.99□□□□□ -0.65
UBE2FP3-201ENST00000436366 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
UBE2FP3-201ENST00000436366 MIER1Q8N108 512 aa10.97□□□□□ -0.65
UBE2FP3-201ENST00000436366 AMER1Q5JTC6 1135 aaPredicted RBP10.94□□□□□ -0.66
UBE2FP3-201ENST00000436366 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
UBE2FP3-201ENST00000436366 KLHL34Q8N239 644 aa10.89□□□□□ -0.67
UBE2FP3-201ENST00000436366 CHRDL2Q6WN34 429 aa10.87□□□□□ -0.67
UBE2FP3-201ENST00000436366 CHADLQ6NUI6 762 aa10.86□□□□□ -0.67
UBE2FP3-201ENST00000436366 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
UBE2FP3-201ENST00000436366 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
UBE2FP3-201ENST00000436366 SPOCK2Q92563 424 aa10.84□□□□□ -0.67
UBE2FP3-201ENST00000436366 FXR2P51116 673 aaKnown RBP eCLIP10.81□□□□□ -0.68
UBE2FP3-201ENST00000436366 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
UBE2FP3-201ENST00000436366 PRKAR2AP13861 404 aaKnown RBP10.78□□□□□ -0.68
UBE2FP3-201ENST00000436366 PIP4P2Q8N4L2 257 aa10.78□□□□□ -0.68
UBE2FP3-201ENST00000436366 NUBP1P53384 320 aa10.74□□□□□ -0.69
UBE2FP3-201ENST00000436366 PKD2Q13563 968 aa10.74□□□□□ -0.69
UBE2FP3-201ENST00000436366 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
UBE2FP3-201ENST00000436366 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
UBE2FP3-201ENST00000436366 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
UBE2FP3-201ENST00000436366 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
UBE2FP3-201ENST00000436366 ECM2O94769 699 aaPredicted RBP10.61□□□□□ -0.71
UBE2FP3-201ENST00000436366 DCAF8Q5TAQ9 597 aa10.6□□□□□ -0.71
UBE2FP3-201ENST00000436366 FAM212AQ96EL1 285 aa10.6□□□□□ -0.71
UBE2FP3-201ENST00000436366 GSE1Q14687 1217 aa10.58□□□□□ -0.72
UBE2FP3-201ENST00000436366 TSPYL2Q9H2G4 693 aaPredicted RBP10.56□□□□□ -0.72
UBE2FP3-201ENST00000436366 RGL2O15211 777 aa10.55□□□□□ -0.72
UBE2FP3-201ENST00000436366 RNF25Q96BH1 459 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms