RNA–Protein interactions for RNA: ENST00000436171.2

PANX1-202, Transcript of pannexin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PANX1, Length 2,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PANX1-202ENST00000436171 NISCHQ9Y2I1 1504 aa37.94■■■■□ 3.66
PANX1-202ENST00000436171 SHROOM4Q9ULL8 1493 aa32.54■■■□□ 2.8
PANX1-202ENST00000436171 CCDC180Q9P1Z9 1646 aa32.29■■■□□ 2.76
PANX1-202ENST00000436171 DCAF8L2P0C7V8 631 aa32.04■■■□□ 2.72
PANX1-202ENST00000436171 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
PANX1-202ENST00000436171 SUPT5HO00267 1087 aaKnown RBP31.81■■■□□ 2.68
PANX1-202ENST00000436171 DCAF1Q9Y4B6 1507 aa30.91■■■□□ 2.54
PANX1-202ENST00000436171 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
PANX1-202ENST00000436171 ABCC9O60706 1549 aa30.63■■■□□ 2.49
PANX1-202ENST00000436171 CHIC1Q5VXU3 224 aa30.61■■■□□ 2.49
PANX1-202ENST00000436171 SCRIBQ14160 1630 aa30.52■■■□□ 2.48
PANX1-202ENST00000436171 LOC105371045A0A1W2PR82 267 aa30.05■■■□□ 2.4
PANX1-202ENST00000436171 NACADO15069 1562 aa29.98■■■□□ 2.39
PANX1-202ENST00000436171 RSF1Q96T23 1441 aaPredicted RBP29.94■■■□□ 2.38
PANX1-202ENST00000436171 PCGF6Q9BYE7 350 aa29.87■■■□□ 2.37
PANX1-202ENST00000436171 CECR2Q9BXF3 1484 aa29.79■■■□□ 2.36
PANX1-202ENST00000436171 RB1CC1Q8TDY2 1594 aa29.66■■■□□ 2.34
PANX1-202ENST00000436171 EHMT2Q96KQ7 1210 aa29.62■■■□□ 2.33
PANX1-202ENST00000436171 MROH2BQ7Z745 1585 aa29.59■■■□□ 2.33
PANX1-202ENST00000436171 FAM9AQ8IZU1 332 aaPredicted RBP29.53■■■□□ 2.32
PANX1-202ENST00000436171 HRCP23327 699 aa29.52■■■□□ 2.32
PANX1-202ENST00000436171 PPARGC1BQ86YN6 1023 aaKnown RBP29.47■■■□□ 2.31
PANX1-202ENST00000436171 WIZO95785 1651 aa29.44■■■□□ 2.3
PANX1-202ENST00000436171 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
PANX1-202ENST00000436171 PABPN1Q86U42 306 aaKnown RBP eCLIP29.32■■■□□ 2.28
PANX1-202ENST00000436171 UNC13AQ9UPW8 1703 aa29.3■■■□□ 2.28
PANX1-202ENST00000436171 BAZ1AQ9NRL2 1556 aaPredicted RBP29.14■■■□□ 2.26
PANX1-202ENST00000436171 SMARCA4P51532 1647 aa28.99■■■□□ 2.23
PANX1-202ENST00000436171 BICRAQ9NZM4 1560 aa28.91■■■□□ 2.22
PANX1-202ENST00000436171 TRIM26Q12899 539 aaPredicted RBP28.91■■■□□ 2.22
PANX1-202ENST00000436171 TOP2AP11388 1531 aaKnown RBP28.81■■■□□ 2.2
PANX1-202ENST00000436171 CCDC88BA6NC98 1476 aa28.79■■■□□ 2.2
PANX1-202ENST00000436171 ABCC8Q09428 1581 aa28.72■■■□□ 2.19
PANX1-202ENST00000436171 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
PANX1-202ENST00000436171 EIF4G1Q04637 1599 aaKnown RBP28.7■■■□□ 2.18
PANX1-202ENST00000436171 TTBK1Q5TCY1 1321 aaPredicted RBP28.57■■■□□ 2.16
PANX1-202ENST00000436171 ATAD2BQ9ULI0 1458 aa28.36■■■□□ 2.13
PANX1-202ENST00000436171 SOGA1O94964 1423 aa28.35■■■□□ 2.13
PANX1-202ENST00000436171 BAZ1BQ9UIG0 1483 aaKnown RBP28.3■■■□□ 2.12
PANX1-202ENST00000436171 PEG3Q9GZU2 1588 aa28.3■■■□□ 2.12
PANX1-202ENST00000436171 RUSC2Q8N2Y8 1516 aa28.27■■■□□ 2.12
PANX1-202ENST00000436171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.2■■■□□ 2.11
PANX1-202ENST00000436171 WRNQ14191 1432 aaPredicted RBP eCLIP28.15■■■□□ 2.1
PANX1-202ENST00000436171 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
PANX1-202ENST00000436171 CSRNP3Q8WYN3 585 aa28.08■■■□□ 2.09
PANX1-202ENST00000436171 SYNJ1O43426 1573 aa28.06■■■□□ 2.08
PANX1-202ENST00000436171 RANGAP1P46060 587 aaPredicted RBP27.97■■■□□ 2.07
PANX1-202ENST00000436171 CEP162Q5TB80 1403 aa27.96■■■□□ 2.07
PANX1-202ENST00000436171 ZEB1P37275 1124 aaPredicted RBP27.96■■■□□ 2.07
PANX1-202ENST00000436171 CCER1Q8TC90 406 aaPredicted RBP27.91■■■□□ 2.06
PANX1-202ENST00000436171 EEA1Q15075 1411 aa27.83■■■□□ 2.05
PANX1-202ENST00000436171 TNIKQ9UKE5 1360 aa27.83■■■□□ 2.05
PANX1-202ENST00000436171 NCAPD3P42695 1498 aa27.79■■■□□ 2.04
PANX1-202ENST00000436171 GOLGA3Q08378 1498 aa27.77■■■□□ 2.04
PANX1-202ENST00000436171 HMGXB3Q12766 1538 aa27.71■■■□□ 2.03
PANX1-202ENST00000436171 RAPGEF2Q9Y4G8 1499 aa27.64■■■□□ 2.02
PANX1-202ENST00000436171 CEP164Q9UPV0 1460 aa27.63■■■□□ 2.01
PANX1-202ENST00000436171 TOP2BQ02880 1626 aa27.63■■■□□ 2.01
PANX1-202ENST00000436171 HNRNPUL2Q1KMD3 747 aaKnown RBP27.56■■■□□ 2
PANX1-202ENST00000436171 CUX1P39880 1505 aa27.54■■■□□ 2
PANX1-202ENST00000436171 KIF21BO75037 1637 aa27.54■■■□□ 2
PANX1-202ENST00000436171 CLIP1P30622 1438 aa27.52■■■□□ 2
PANX1-202ENST00000436171 CFTRP13569 1480 aa27.5■■□□□ 1.99
PANX1-202ENST00000436171 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
PANX1-202ENST00000436171 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.98
PANX1-202ENST00000436171 SCAF1Q9H7N4 1312 aaKnown RBP27.4■■□□□ 1.98
PANX1-202ENST00000436171 CADPSQ9ULU8 1353 aa27.31■■□□□ 1.96
PANX1-202ENST00000436171 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
PANX1-202ENST00000436171 VPS8Q8N3P4 1428 aa27.28■■□□□ 1.96
PANX1-202ENST00000436171 APLP2Q06481 763 aa27.27■■□□□ 1.96
PANX1-202ENST00000436171 DIEXFQ68CQ4 756 aaKnown RBP27.27■■□□□ 1.96
PANX1-202ENST00000436171 PRXQ9BXM0 1461 aa27.26■■□□□ 1.95
PANX1-202ENST00000436171 CUX2O14529 1486 aa27.2■■□□□ 1.94
PANX1-202ENST00000436171 NESP48681 1621 aa27.18■■□□□ 1.94
PANX1-202ENST00000436171 PRDM2Q13029 1718 aa27.17■■□□□ 1.94
PANX1-202ENST00000436171 DNAJC5BQ9UF47 199 aa27.17■■□□□ 1.94
PANX1-202ENST00000436171 NEUROD1Q13562 356 aa27.15■■□□□ 1.94
PANX1-202ENST00000436171 ERICH3Q5RHP9 1530 aa27.14■■□□□ 1.94
PANX1-202ENST00000436171 FGD5Q6ZNL6 1462 aa27.14■■□□□ 1.93
PANX1-202ENST00000436171 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
PANX1-202ENST00000436171 ARAP1Q96P48 1450 aa27.1■■□□□ 1.93
PANX1-202ENST00000436171 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
PANX1-202ENST00000436171 IGF1RP08069 1367 aa27.05■■□□□ 1.92
PANX1-202ENST00000436171 YTHDC1Q96MU7 727 aaKnown RBP27.01■■□□□ 1.91
PANX1-202ENST00000436171 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
PANX1-202ENST00000436171 ZNF316A6NFI3 1004 aaPredicted RBP26.97■■□□□ 1.91
PANX1-202ENST00000436171 ITGAEP38570 1179 aa26.97■■□□□ 1.91
PANX1-202ENST00000436171 CARMIL1Q5VZK9 1371 aa26.96■■□□□ 1.91
PANX1-202ENST00000436171 P3H3Q8IVL6 736 aa26.95■■□□□ 1.9
PANX1-202ENST00000436171 ARHGAP35Q9NRY4 1499 aa26.94■■□□□ 1.9
PANX1-202ENST00000436171 ACIN1Q9UKV3 1341 aaKnown RBP26.94■■□□□ 1.9
PANX1-202ENST00000436171 TOPBP1Q92547 1522 aa26.86■■□□□ 1.89
PANX1-202ENST00000436171 POLA1P09884 1462 aaPredicted RBP26.85■■□□□ 1.89
PANX1-202ENST00000436171 MIER1Q8N108 512 aa26.84■■□□□ 1.89
PANX1-202ENST00000436171 ATP1B4Q9UN42 357 aaPredicted RBP26.82■■□□□ 1.88
PANX1-202ENST00000436171 GTF3C3Q9Y5Q9 886 aa26.82■■□□□ 1.88
PANX1-202ENST00000436171 DNMBPQ6XZF7 1577 aa26.81■■□□□ 1.88
PANX1-202ENST00000436171 URB2Q14146 1524 aaKnown RBP26.74■■□□□ 1.87
PANX1-202ENST00000436171 TDRD9Q8NDG6 1382 aaKnown RBP26.73■■□□□ 1.87
PANX1-202ENST00000436171 ABCA10Q8WWZ4 1543 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 229.5 ms