RNA–Protein interactions for RNA: ENST00000436002.1

NPM1P48-201, Transcript of nucleophosmin 1 pseudogene 48, humanhuman

BASIC

Gene NPM1P48, Length 853 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P48-201ENST00000436002 AEBP2Q6ZN18 517 aaPredicted RBP29.76■■■□□ 2.35
NPM1P48-201ENST00000436002 CHIC1Q5VXU3 224 aa28.38■■■□□ 2.13
NPM1P48-201ENST00000436002 SENP3Q9H4L4 574 aaPredicted RBP25.34■■□□□ 1.65
NPM1P48-201ENST00000436002 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
NPM1P48-201ENST00000436002 FOXD1Q16676 465 aa23.62■■□□□ 1.37
NPM1P48-201ENST00000436002 PLPPR3Q6T4P5 718 aa22.76■■□□□ 1.23
NPM1P48-201ENST00000436002 PPP6R1Q9UPN7 881 aa22.23■■□□□ 1.15
NPM1P48-201ENST00000436002 ADRA2BP18089 450 aa22.17■■□□□ 1.14
NPM1P48-201ENST00000436002 PIAS4Q8N2W9 510 aaPredicted RBP22.11■■□□□ 1.13
NPM1P48-201ENST00000436002 MSH5O43196 834 aa22.01■■□□□ 1.11
NPM1P48-201ENST00000436002 POTEDQ86YR6 584 aa21.25■□□□□ 0.99
NPM1P48-201ENST00000436002 MAPK8IP2Q13387 824 aaPredicted RBP20.33■□□□□ 0.85
NPM1P48-201ENST00000436002 SCAF1Q9H7N4 1312 aaKnown RBP20.26■□□□□ 0.83
NPM1P48-201ENST00000436002 DMRT2Q9Y5R5 561 aa20.12■□□□□ 0.81
NPM1P48-201ENST00000436002 PPP4R3CPQ6ZMV5 832 aa19.98■□□□□ 0.79
NPM1P48-201ENST00000436002 CNKSR2Q8WXI2 1034 aa19.55■□□□□ 0.72
NPM1P48-201ENST00000436002 HOXD11P31277 338 aaPredicted RBP19.43■□□□□ 0.7
NPM1P48-201ENST00000436002 DCAF8L1A6NGE4 600 aa19.33■□□□□ 0.68
NPM1P48-201ENST00000436002 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
NPM1P48-201ENST00000436002 NCBP3Q53F19 620 aaKnown RBP19.25■□□□□ 0.67
NPM1P48-201ENST00000436002 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
NPM1P48-201ENST00000436002 CACNB1Q02641 598 aaPredicted RBP18.83■□□□□ 0.6
NPM1P48-201ENST00000436002 RNF39Q9H2S5 420 aa18.82■□□□□ 0.6
NPM1P48-201ENST00000436002 KCNA4P22459 653 aa18.77■□□□□ 0.6
NPM1P48-201ENST00000436002 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
NPM1P48-201ENST00000436002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.55■□□□□ 0.56
NPM1P48-201ENST00000436002 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
NPM1P48-201ENST00000436002 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
NPM1P48-201ENST00000436002 SLC4A2P04920 1241 aa18.09■□□□□ 0.49
NPM1P48-201ENST00000436002 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
NPM1P48-201ENST00000436002 CAPN15O75808 1086 aa17.83■□□□□ 0.44
NPM1P48-201ENST00000436002 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
NPM1P48-201ENST00000436002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
NPM1P48-201ENST00000436002 DSG3P32926 999 aa17.68■□□□□ 0.42
NPM1P48-201ENST00000436002 HNRNPUL2Q1KMD3 747 aaKnown RBP17.68■□□□□ 0.42
NPM1P48-201ENST00000436002 APLP2Q06481 763 aa17.64■□□□□ 0.41
NPM1P48-201ENST00000436002 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
NPM1P48-201ENST00000436002 SAMD1Q6SPF0 538 aaPredicted RBP17.59■□□□□ 0.41
NPM1P48-201ENST00000436002 MYCNP04198 464 aaPredicted RBP17.53■□□□□ 0.4
NPM1P48-201ENST00000436002 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.4
NPM1P48-201ENST00000436002 ABCB7O75027 752 aa17.45■□□□□ 0.38
NPM1P48-201ENST00000436002 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
NPM1P48-201ENST00000436002 ZBTB22O15209 634 aa17.27■□□□□ 0.36
NPM1P48-201ENST00000436002 POLA2Q14181 598 aa17.17■□□□□ 0.34
NPM1P48-201ENST00000436002 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
NPM1P48-201ENST00000436002 ATXN8OSP0DMR3 200 aa16.88■□□□□ 0.29
NPM1P48-201ENST00000436002 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
NPM1P48-201ENST00000436002 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
NPM1P48-201ENST00000436002 POTEHQ6S545 545 aa16.68■□□□□ 0.26
NPM1P48-201ENST00000436002 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
NPM1P48-201ENST00000436002 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
NPM1P48-201ENST00000436002 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
NPM1P48-201ENST00000436002 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
NPM1P48-201ENST00000436002 FBLN2P98095 1184 aa16.45■□□□□ 0.22
NPM1P48-201ENST00000436002 CHRDL2Q6WN34 429 aa16.44■□□□□ 0.22
NPM1P48-201ENST00000436002 MKRN4PQ13434 485 aaPredicted RBP16.36■□□□□ 0.21
NPM1P48-201ENST00000436002 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
NPM1P48-201ENST00000436002 SPDYE2BA6NHP3 402 aa16.27■□□□□ 0.2
NPM1P48-201ENST00000436002 SPDYE6P0CI01 402 aa16.27■□□□□ 0.2
NPM1P48-201ENST00000436002 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.2
NPM1P48-201ENST00000436002 PITPNM1O00562 1244 aa16.18■□□□□ 0.18
NPM1P48-201ENST00000436002 ZNF692Q9BU19 519 aaPredicted RBP16.15■□□□□ 0.18
NPM1P48-201ENST00000436002 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
NPM1P48-201ENST00000436002 SSUH2Q9Y2M2 353 aa16.08■□□□□ 0.16
NPM1P48-201ENST00000436002 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
NPM1P48-201ENST00000436002 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
NPM1P48-201ENST00000436002 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
NPM1P48-201ENST00000436002 PABPN1Q86U42 306 aaKnown RBP eCLIP15.91■□□□□ 0.14
NPM1P48-201ENST00000436002 PRKAR2AP13861 404 aaKnown RBP15.78■□□□□ 0.12
NPM1P48-201ENST00000436002 HAX1O00165 279 aa15.77■□□□□ 0.12
NPM1P48-201ENST00000436002 PRR29P0C7W0 189 aa15.71■□□□□ 0.11
NPM1P48-201ENST00000436002 SP7Q8TDD2 431 aaPredicted RBP15.71■□□□□ 0.11
NPM1P48-201ENST00000436002 SPDYE4A6NLX3 237 aa15.67■□□□□ 0.1
NPM1P48-201ENST00000436002 CHADLQ6NUI6 762 aa15.64■□□□□ 0.09
NPM1P48-201ENST00000436002 EVX2Q03828 476 aa15.6■□□□□ 0.09
NPM1P48-201ENST00000436002 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
NPM1P48-201ENST00000436002 STAG3Q9UJ98 1225 aa15.48■□□□□ 0.07
NPM1P48-201ENST00000436002 FARP1Q9Y4F1 1045 aaPredicted RBP15.41■□□□□ 0.06
NPM1P48-201ENST00000436002 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
NPM1P48-201ENST00000436002 PROM2Q8N271 834 aa15.28■□□□□ 0.04
NPM1P48-201ENST00000436002 CD44P16070 742 aaKnown RBP15.27■□□□□ 0.04
NPM1P48-201ENST00000436002 GABBR2O75899 941 aa15.23■□□□□ 0.03
NPM1P48-201ENST00000436002 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
NPM1P48-201ENST00000436002 ZRANB1Q9UGI0 708 aa15.09■□□□□ 0.01
NPM1P48-201ENST00000436002 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
NPM1P48-201ENST00000436002 FKBP8Q14318 412 aa15.06■□□□□ 0
NPM1P48-201ENST00000436002 ZNF579Q8NAF0 562 aaKnown RBP15.02■□□□□ -0
NPM1P48-201ENST00000436002 CLCN6P51797 869 aa15□□□□□ -0.01
NPM1P48-201ENST00000436002 PAK3O75914 559 aaPredicted RBP14.98□□□□□ -0.01
NPM1P48-201ENST00000436002 MIER1Q8N108 512 aa14.96□□□□□ -0.01
NPM1P48-201ENST00000436002 POTEIP0CG38 1075 aa14.91□□□□□ -0.02
NPM1P48-201ENST00000436002 PHF12Q96QT6 1004 aa14.9□□□□□ -0.02
NPM1P48-201ENST00000436002 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
NPM1P48-201ENST00000436002 GALR2O43603 387 aaPredicted RBP14.86□□□□□ -0.03
NPM1P48-201ENST00000436002 DCBLD2Q96PD2 775 aa14.86□□□□□ -0.03
NPM1P48-201ENST00000436002 PLCD3Q8N3E9 789 aa14.85□□□□□ -0.03
NPM1P48-201ENST00000436002 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
NPM1P48-201ENST00000436002 TSPYL2Q9H2G4 693 aaPredicted RBP14.83□□□□□ -0.04
NPM1P48-201ENST00000436002 LHX8Q68G74 356 aa14.75□□□□□ -0.05
NPM1P48-201ENST00000436002 RASEFQ8IZ41 740 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms