RNA–Protein interactions for RNA: ENST00000435981.5

LINC01393-202, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 1 (best) BASIC

Gene LINC01393, Length 1,187 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-202ENST00000435981 AEBP2Q6ZN18 517 aaPredicted RBP33.89■■■■□ 3.02
LINC01393-202ENST00000435981 CHIC1Q5VXU3 224 aa31.77■■■□□ 2.68
LINC01393-202ENST00000435981 SENP3Q9H4L4 574 aaPredicted RBP29.18■■■□□ 2.26
LINC01393-202ENST00000435981 PHF23Q9BUL5 403 aaPredicted RBP28.6■■■□□ 2.17
LINC01393-202ENST00000435981 FOXD1Q16676 465 aa27.23■■□□□ 1.95
LINC01393-202ENST00000435981 POTEDQ86YR6 584 aa26.89■■□□□ 1.9
LINC01393-202ENST00000435981 MSH5O43196 834 aa25.96■■□□□ 1.75
LINC01393-202ENST00000435981 PIAS4Q8N2W9 510 aaPredicted RBP25.22■■□□□ 1.63
LINC01393-202ENST00000435981 PPP6R1Q9UPN7 881 aa24.68■■□□□ 1.54
LINC01393-202ENST00000435981 PLPPR3Q6T4P5 718 aa24.62■■□□□ 1.53
LINC01393-202ENST00000435981 ADRA2BP18089 450 aa24.54■■□□□ 1.52
LINC01393-202ENST00000435981 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
LINC01393-202ENST00000435981 MAPK8IP2Q13387 824 aaPredicted RBP22.81■■□□□ 1.24
LINC01393-202ENST00000435981 CACNB1Q02641 598 aaPredicted RBP22.8■■□□□ 1.24
LINC01393-202ENST00000435981 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
LINC01393-202ENST00000435981 RNF39Q9H2S5 420 aa22.02■■□□□ 1.12
LINC01393-202ENST00000435981 DCAF8L1A6NGE4 600 aa21.99■■□□□ 1.11
LINC01393-202ENST00000435981 HOXD11P31277 338 aaPredicted RBP21.75■■□□□ 1.07
LINC01393-202ENST00000435981 C1QBPQ07021 282 aaKnown RBP21.69■■□□□ 1.06
LINC01393-202ENST00000435981 PPP4R3CPQ6ZMV5 832 aa21.4■■□□□ 1.02
LINC01393-202ENST00000435981 RNF216Q9NWF9 866 aaPredicted RBP21.34■■□□□ 1.01
LINC01393-202ENST00000435981 DNAJC5BQ9UF47 199 aa21.31■■□□□ 1
LINC01393-202ENST00000435981 CNKSR2Q8WXI2 1034 aa21.27■■□□□ 1
LINC01393-202ENST00000435981 POTEHQ6S545 545 aa20.9■□□□□ 0.94
LINC01393-202ENST00000435981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.69■□□□□ 0.9
LINC01393-202ENST00000435981 NCBP3Q53F19 620 aaKnown RBP20.37■□□□□ 0.85
LINC01393-202ENST00000435981 DSG3P32926 999 aa20.27■□□□□ 0.84
LINC01393-202ENST00000435981 NPM3O75607 178 aaKnown RBP20.14■□□□□ 0.81
LINC01393-202ENST00000435981 CAPN15O75808 1086 aa20.14■□□□□ 0.81
LINC01393-202ENST00000435981 U3KPZ7 1027 aaPredicted RBP20.12■□□□□ 0.81
LINC01393-202ENST00000435981 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.81
LINC01393-202ENST00000435981 KCNA4P22459 653 aa19.78■□□□□ 0.76
LINC01393-202ENST00000435981 APLP2Q06481 763 aa19.6■□□□□ 0.73
LINC01393-202ENST00000435981 ZNF219Q9P2Y4 722 aaPredicted RBP19.59■□□□□ 0.73
LINC01393-202ENST00000435981 TRHP20396 242 aaPredicted RBP19.56■□□□□ 0.72
LINC01393-202ENST00000435981 ABCB7O75027 752 aa19.52■□□□□ 0.72
LINC01393-202ENST00000435981 RBM42Q9BTD8 480 aaKnown RBP19.45■□□□□ 0.7
LINC01393-202ENST00000435981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
LINC01393-202ENST00000435981 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
LINC01393-202ENST00000435981 CHRDL2Q6WN34 429 aa19.34■□□□□ 0.69
LINC01393-202ENST00000435981 SLC4A2P04920 1241 aa19.32■□□□□ 0.68
LINC01393-202ENST00000435981 SAMD1Q6SPF0 538 aaPredicted RBP19.15■□□□□ 0.66
LINC01393-202ENST00000435981 SP7Q8TDD2 431 aaPredicted RBP19.15■□□□□ 0.66
LINC01393-202ENST00000435981 POLA2Q14181 598 aa18.84■□□□□ 0.61
LINC01393-202ENST00000435981 AKT1S1Q96B36 256 aa18.77■□□□□ 0.6
LINC01393-202ENST00000435981 PIP4P2Q8N4L2 257 aa18.64■□□□□ 0.57
LINC01393-202ENST00000435981 SLC4A1APQ9BWU0 796 aaKnown RBP18.63■□□□□ 0.57
LINC01393-202ENST00000435981 MYCNP04198 464 aaPredicted RBP18.59■□□□□ 0.57
LINC01393-202ENST00000435981 HAX1O00165 279 aa18.58■□□□□ 0.56
LINC01393-202ENST00000435981 REM2Q8IYK8 340 aaPredicted RBP18.55■□□□□ 0.56
LINC01393-202ENST00000435981 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
LINC01393-202ENST00000435981 FXR2P51116 673 aaKnown RBP eCLIP18.42■□□□□ 0.54
LINC01393-202ENST00000435981 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
LINC01393-202ENST00000435981 PITPNM1O00562 1244 aa18.34■□□□□ 0.53
LINC01393-202ENST00000435981 OSCARQ8IYS5 282 aa18.25■□□□□ 0.51
LINC01393-202ENST00000435981 ATF5Q9Y2D1 282 aaPredicted RBP18.25■□□□□ 0.51
LINC01393-202ENST00000435981 ZBTB22O15209 634 aa18.23■□□□□ 0.51
LINC01393-202ENST00000435981 EVX2Q03828 476 aa18.2■□□□□ 0.5
LINC01393-202ENST00000435981 LHX8Q68G74 356 aa17.94■□□□□ 0.46
LINC01393-202ENST00000435981 C19orf67A6NJJ6 358 aa17.86■□□□□ 0.45
LINC01393-202ENST00000435981 PRKAR2AP13861 404 aaKnown RBP17.86■□□□□ 0.45
LINC01393-202ENST00000435981 GABBR2O75899 941 aa17.81■□□□□ 0.44
LINC01393-202ENST00000435981 ATXN8OSP0DMR3 200 aa17.81■□□□□ 0.44
LINC01393-202ENST00000435981 SPDYE2BA6NHP3 402 aa17.8■□□□□ 0.44
LINC01393-202ENST00000435981 SPDYE6P0CI01 402 aa17.8■□□□□ 0.44
LINC01393-202ENST00000435981 SPDYE2Q495Y8 402 aa17.8■□□□□ 0.44
LINC01393-202ENST00000435981 SPDYE1Q8NFV5 336 aaPredicted RBP17.72■□□□□ 0.43
LINC01393-202ENST00000435981 CLEC11AQ9Y240 323 aa17.66■□□□□ 0.42
LINC01393-202ENST00000435981 FBLN2P98095 1184 aa17.57■□□□□ 0.4
LINC01393-202ENST00000435981 PLSCR2Q9NRY7 297 aa17.53■□□□□ 0.4
LINC01393-202ENST00000435981 SSUH2Q9Y2M2 353 aa17.43■□□□□ 0.38
LINC01393-202ENST00000435981 MKRN4PQ13434 485 aaPredicted RBP17.4■□□□□ 0.38
LINC01393-202ENST00000435981 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
LINC01393-202ENST00000435981 CHADLQ6NUI6 762 aa17.39■□□□□ 0.37
LINC01393-202ENST00000435981 ZNF692Q9BU19 519 aaPredicted RBP17.39■□□□□ 0.37
LINC01393-202ENST00000435981 CLCN6P51797 869 aa17.37■□□□□ 0.37
LINC01393-202ENST00000435981 CSRNP3Q8WYN3 585 aa17.37■□□□□ 0.37
LINC01393-202ENST00000435981 PRR29P0C7W0 189 aa17.28■□□□□ 0.36
LINC01393-202ENST00000435981 CD44P16070 742 aaKnown RBP17.24■□□□□ 0.35
LINC01393-202ENST00000435981 DCBLD2Q96PD2 775 aa17.15■□□□□ 0.34
LINC01393-202ENST00000435981 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
LINC01393-202ENST00000435981 FARP1Q9Y4F1 1045 aaPredicted RBP17.12■□□□□ 0.33
LINC01393-202ENST00000435981 PABPN1Q86U42 306 aaKnown RBP eCLIP17.08■□□□□ 0.32
LINC01393-202ENST00000435981 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
LINC01393-202ENST00000435981 OTUD5Q96G74 571 aa16.96■□□□□ 0.31
LINC01393-202ENST00000435981 POTEMA6NI47 508 aa16.93■□□□□ 0.3
LINC01393-202ENST00000435981 POTEGQ6S5H5 508 aa16.84■□□□□ 0.29
LINC01393-202ENST00000435981 PCDH10Q9P2E7 1040 aa16.84■□□□□ 0.29
LINC01393-202ENST00000435981 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
LINC01393-202ENST00000435981 POTEB2H3BUK9 544 aa16.78■□□□□ 0.28
LINC01393-202ENST00000435981 GALR2O43603 387 aaPredicted RBP16.76■□□□□ 0.27
LINC01393-202ENST00000435981 CREBZFQ9NS37 354 aa16.6■□□□□ 0.25
LINC01393-202ENST00000435981 PAK3O75914 559 aaPredicted RBP16.56■□□□□ 0.24
LINC01393-202ENST00000435981 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
LINC01393-202ENST00000435981 PELP1Q8IZL8 1130 aaKnown RBP16.51■□□□□ 0.23
LINC01393-202ENST00000435981 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
LINC01393-202ENST00000435981 MAMSTRQ6ZN01 415 aa16.48■□□□□ 0.23
LINC01393-202ENST00000435981 PHF12Q96QT6 1004 aa16.48■□□□□ 0.23
LINC01393-202ENST00000435981 METRNQ9UJH8 293 aa16.44■□□□□ 0.22
LINC01393-202ENST00000435981 C7P10643 843 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms