RNA–Protein interactions for RNA: ENST00000435771.1

AC009961.2-201, humanhuman

BASIC

Gene AC009961.2, Length 251 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.2-201ENST00000435771 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
AC009961.2-201ENST00000435771 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
AC009961.2-201ENST00000435771 PHF23Q9BUL5 403 aaPredicted RBP17.1■□□□□ 0.33
AC009961.2-201ENST00000435771 SENP3Q9H4L4 574 aaPredicted RBP16.94■□□□□ 0.3
AC009961.2-201ENST00000435771 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
AC009961.2-201ENST00000435771 FOXD1Q16676 465 aa15.74■□□□□ 0.11
AC009961.2-201ENST00000435771 ADRA2BP18089 450 aa15.14■□□□□ 0.01
AC009961.2-201ENST00000435771 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
AC009961.2-201ENST00000435771 PIAS4Q8N2W9 510 aaPredicted RBP14.86□□□□□ -0.03
AC009961.2-201ENST00000435771 MSH5O43196 834 aa14.51□□□□□ -0.09
AC009961.2-201ENST00000435771 PPP4R3CPQ6ZMV5 832 aa13.91□□□□□ -0.18
AC009961.2-201ENST00000435771 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
AC009961.2-201ENST00000435771 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
AC009961.2-201ENST00000435771 KCNA4P22459 653 aa13.54□□□□□ -0.24
AC009961.2-201ENST00000435771 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.25
AC009961.2-201ENST00000435771 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
AC009961.2-201ENST00000435771 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
AC009961.2-201ENST00000435771 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
AC009961.2-201ENST00000435771 NPM3O75607 178 aaKnown RBP13.32□□□□□ -0.28
AC009961.2-201ENST00000435771 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
AC009961.2-201ENST00000435771 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
AC009961.2-201ENST00000435771 DCAF8L1A6NGE4 600 aa13.05□□□□□ -0.32
AC009961.2-201ENST00000435771 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
AC009961.2-201ENST00000435771 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
AC009961.2-201ENST00000435771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.38
AC009961.2-201ENST00000435771 SLC4A2P04920 1241 aa12.58□□□□□ -0.4
AC009961.2-201ENST00000435771 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
AC009961.2-201ENST00000435771 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
AC009961.2-201ENST00000435771 ZBTB22O15209 634 aa12.43□□□□□ -0.42
AC009961.2-201ENST00000435771 RNF39Q9H2S5 420 aa12.42□□□□□ -0.42
AC009961.2-201ENST00000435771 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
AC009961.2-201ENST00000435771 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
AC009961.2-201ENST00000435771 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
AC009961.2-201ENST00000435771 C1QBPQ07021 282 aaKnown RBP12.28□□□□□ -0.44
AC009961.2-201ENST00000435771 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
AC009961.2-201ENST00000435771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.21□□□□□ -0.45
AC009961.2-201ENST00000435771 HNRNPUL2Q1KMD3 747 aaKnown RBP12.21□□□□□ -0.45
AC009961.2-201ENST00000435771 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
AC009961.2-201ENST00000435771 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
AC009961.2-201ENST00000435771 APLP2Q06481 763 aa12.09□□□□□ -0.47
AC009961.2-201ENST00000435771 CAPN15O75808 1086 aa12.08□□□□□ -0.48
AC009961.2-201ENST00000435771 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
AC009961.2-201ENST00000435771 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
AC009961.2-201ENST00000435771 ATXN8OSP0DMR3 200 aa11.98□□□□□ -0.49
AC009961.2-201ENST00000435771 ZNF219Q9P2Y4 722 aaPredicted RBP11.95□□□□□ -0.5
AC009961.2-201ENST00000435771 ABCB7O75027 752 aa11.86□□□□□ -0.51
AC009961.2-201ENST00000435771 DSG3P32926 999 aa11.83□□□□□ -0.52
AC009961.2-201ENST00000435771 POLA2Q14181 598 aa11.78□□□□□ -0.52
AC009961.2-201ENST00000435771 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.57
AC009961.2-201ENST00000435771 FBLN2P98095 1184 aa11.51□□□□□ -0.57
AC009961.2-201ENST00000435771 MKRN4PQ13434 485 aaPredicted RBP11.46□□□□□ -0.57
AC009961.2-201ENST00000435771 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
AC009961.2-201ENST00000435771 RBM42Q9BTD8 480 aaKnown RBP11.27□□□□□ -0.61
AC009961.2-201ENST00000435771 SPDYE2BA6NHP3 402 aa11.23□□□□□ -0.61
AC009961.2-201ENST00000435771 SPDYE6P0CI01 402 aa11.23□□□□□ -0.61
AC009961.2-201ENST00000435771 SPDYE2Q495Y8 402 aa11.23□□□□□ -0.61
AC009961.2-201ENST00000435771 ZNF692Q9BU19 519 aaPredicted RBP11.22□□□□□ -0.61
AC009961.2-201ENST00000435771 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
AC009961.2-201ENST00000435771 FKBP8Q14318 412 aa11.2□□□□□ -0.62
AC009961.2-201ENST00000435771 AKT1S1Q96B36 256 aa11.12□□□□□ -0.63
AC009961.2-201ENST00000435771 SSUH2Q9Y2M2 353 aa11.11□□□□□ -0.63
AC009961.2-201ENST00000435771 PABPN1Q86U42 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
AC009961.2-201ENST00000435771 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
AC009961.2-201ENST00000435771 CLEC11AQ9Y240 323 aa10.95□□□□□ -0.66
AC009961.2-201ENST00000435771 PROM2Q8N271 834 aa10.92□□□□□ -0.66
AC009961.2-201ENST00000435771 SPDYE1Q8NFV5 336 aaPredicted RBP10.92□□□□□ -0.66
AC009961.2-201ENST00000435771 PITPNM1O00562 1244 aa10.9□□□□□ -0.66
AC009961.2-201ENST00000435771 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
AC009961.2-201ENST00000435771 CHRDL2Q6WN34 429 aa10.83□□□□□ -0.68
AC009961.2-201ENST00000435771 PRR29P0C7W0 189 aa10.81□□□□□ -0.68
AC009961.2-201ENST00000435771 FBXO3Q9UK99 471 aa10.77□□□□□ -0.69
AC009961.2-201ENST00000435771 PIP4P2Q8N4L2 257 aa10.69□□□□□ -0.7
AC009961.2-201ENST00000435771 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.7
AC009961.2-201ENST00000435771 CHADLQ6NUI6 762 aa10.68□□□□□ -0.7
AC009961.2-201ENST00000435771 MIER1Q8N108 512 aa10.67□□□□□ -0.7
AC009961.2-201ENST00000435771 PRKAR2AP13861 404 aaKnown RBP10.66□□□□□ -0.7
AC009961.2-201ENST00000435771 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
AC009961.2-201ENST00000435771 VASPP50552 380 aaPredicted RBP10.63□□□□□ -0.71
AC009961.2-201ENST00000435771 CREBZFQ9NS37 354 aa10.62□□□□□ -0.71
AC009961.2-201ENST00000435771 PLEKHG5O94827 1062 aa10.61□□□□□ -0.71
AC009961.2-201ENST00000435771 POTEHQ6S545 545 aa10.56□□□□□ -0.72
AC009961.2-201ENST00000435771 KLHL34Q8N239 644 aa10.53□□□□□ -0.72
AC009961.2-201ENST00000435771 FARP1Q9Y4F1 1045 aaPredicted RBP10.52□□□□□ -0.73
AC009961.2-201ENST00000435771 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
AC009961.2-201ENST00000435771 MNX1P50219 401 aaPredicted RBP10.47□□□□□ -0.73
AC009961.2-201ENST00000435771 ZBTB47Q9UFB7 747 aaPredicted RBP10.47□□□□□ -0.73
AC009961.2-201ENST00000435771 NPM1P06748 294 aaKnown RBP eCLIP10.46□□□□□ -0.73
AC009961.2-201ENST00000435771 HAX1O00165 279 aa10.42□□□□□ -0.74
AC009961.2-201ENST00000435771 SPOCK2Q92563 424 aa10.37□□□□□ -0.75
AC009961.2-201ENST00000435771 CD44P16070 742 aaKnown RBP10.34□□□□□ -0.75
AC009961.2-201ENST00000435771 TSPYL2Q9H2G4 693 aaPredicted RBP10.34□□□□□ -0.75
AC009961.2-201ENST00000435771 NUBP1P53384 320 aa10.33□□□□□ -0.76
AC009961.2-201ENST00000435771 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
AC009961.2-201ENST00000435771 C19orf67A6NJJ6 358 aa10.32□□□□□ -0.76
AC009961.2-201ENST00000435771 PAK3O75914 559 aaPredicted RBP10.31□□□□□ -0.76
AC009961.2-201ENST00000435771 DCAF8Q5TAQ9 597 aa10.31□□□□□ -0.76
AC009961.2-201ENST00000435771 ZRANB1Q9UGI0 708 aa10.3□□□□□ -0.76
AC009961.2-201ENST00000435771 EVX2Q03828 476 aa10.29□□□□□ -0.76
AC009961.2-201ENST00000435771 CIZ1Q9ULV3 898 aaPredicted RBP10.29□□□□□ -0.76
AC009961.2-201ENST00000435771 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms