RNA–Protein interactions for RNA: ENST00000435623.1

MTND1P28-201, Transcript of MT-ND1 pseudogene 28, humanhuman

BASIC

Gene MTND1P28, Length 950 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTND1P28-201ENST00000435623 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
MTND1P28-201ENST00000435623 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
MTND1P28-201ENST00000435623 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.89
MTND1P28-201ENST00000435623 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
MTND1P28-201ENST00000435623 FOXD1Q16676 465 aa19.34■□□□□ 0.69
MTND1P28-201ENST00000435623 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
MTND1P28-201ENST00000435623 MSH5O43196 834 aa18.27■□□□□ 0.52
MTND1P28-201ENST00000435623 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
MTND1P28-201ENST00000435623 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
MTND1P28-201ENST00000435623 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
MTND1P28-201ENST00000435623 ADRA2BP18089 450 aa17.59■□□□□ 0.41
MTND1P28-201ENST00000435623 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
MTND1P28-201ENST00000435623 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
MTND1P28-201ENST00000435623 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
MTND1P28-201ENST00000435623 CACNB1Q02641 598 aaPredicted RBP16.01■□□□□ 0.15
MTND1P28-201ENST00000435623 DCAF8L1A6NGE4 600 aa15.64■□□□□ 0.09
MTND1P28-201ENST00000435623 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
MTND1P28-201ENST00000435623 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
MTND1P28-201ENST00000435623 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
MTND1P28-201ENST00000435623 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
MTND1P28-201ENST00000435623 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
MTND1P28-201ENST00000435623 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
MTND1P28-201ENST00000435623 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
MTND1P28-201ENST00000435623 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
MTND1P28-201ENST00000435623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.05
MTND1P28-201ENST00000435623 KCNA4P22459 653 aa14.69□□□□□ -0.06
MTND1P28-201ENST00000435623 POTEHQ6S545 545 aa14.6□□□□□ -0.07
MTND1P28-201ENST00000435623 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
MTND1P28-201ENST00000435623 DSG3P32926 999 aa14.39□□□□□ -0.11
MTND1P28-201ENST00000435623 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
MTND1P28-201ENST00000435623 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
MTND1P28-201ENST00000435623 CAPN15O75808 1086 aa14.33□□□□□ -0.12
MTND1P28-201ENST00000435623 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
MTND1P28-201ENST00000435623 ABCB7O75027 752 aa13.97□□□□□ -0.17
MTND1P28-201ENST00000435623 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
MTND1P28-201ENST00000435623 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
MTND1P28-201ENST00000435623 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
MTND1P28-201ENST00000435623 APLP2Q06481 763 aa13.88□□□□□ -0.19
MTND1P28-201ENST00000435623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
MTND1P28-201ENST00000435623 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
MTND1P28-201ENST00000435623 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
MTND1P28-201ENST00000435623 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
MTND1P28-201ENST00000435623 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
MTND1P28-201ENST00000435623 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
MTND1P28-201ENST00000435623 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
MTND1P28-201ENST00000435623 ZBTB22O15209 634 aa13.48□□□□□ -0.25
MTND1P28-201ENST00000435623 POLA2Q14181 598 aa13.48□□□□□ -0.25
MTND1P28-201ENST00000435623 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
MTND1P28-201ENST00000435623 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
MTND1P28-201ENST00000435623 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
MTND1P28-201ENST00000435623 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
MTND1P28-201ENST00000435623 PIP4P2Q8N4L2 257 aa13.23□□□□□ -0.29
MTND1P28-201ENST00000435623 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
MTND1P28-201ENST00000435623 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
MTND1P28-201ENST00000435623 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
MTND1P28-201ENST00000435623 HAX1O00165 279 aa13.11□□□□□ -0.31
MTND1P28-201ENST00000435623 ATXN8OSP0DMR3 200 aa13.1□□□□□ -0.31
MTND1P28-201ENST00000435623 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
MTND1P28-201ENST00000435623 PITPNM1O00562 1244 aa13.06□□□□□ -0.32
MTND1P28-201ENST00000435623 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
MTND1P28-201ENST00000435623 EVX2Q03828 476 aa12.95□□□□□ -0.34
MTND1P28-201ENST00000435623 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.37
MTND1P28-201ENST00000435623 SPDYE6P0CI01 402 aa12.71□□□□□ -0.37
MTND1P28-201ENST00000435623 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
MTND1P28-201ENST00000435623 PRKAR2AP13861 404 aaKnown RBP12.7□□□□□ -0.38
MTND1P28-201ENST00000435623 C19orf67A6NJJ6 358 aa12.66□□□□□ -0.38
MTND1P28-201ENST00000435623 FBLN2P98095 1184 aa12.62□□□□□ -0.39
MTND1P28-201ENST00000435623 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
MTND1P28-201ENST00000435623 GABBR2O75899 941 aa12.61□□□□□ -0.39
MTND1P28-201ENST00000435623 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
MTND1P28-201ENST00000435623 LHX8Q68G74 356 aa12.59□□□□□ -0.39
MTND1P28-201ENST00000435623 SSUH2Q9Y2M2 353 aa12.5□□□□□ -0.41
MTND1P28-201ENST00000435623 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
MTND1P28-201ENST00000435623 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
MTND1P28-201ENST00000435623 ZNF692Q9BU19 519 aaPredicted RBP12.47□□□□□ -0.41
MTND1P28-201ENST00000435623 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
MTND1P28-201ENST00000435623 PRR29P0C7W0 189 aa12.34□□□□□ -0.43
MTND1P28-201ENST00000435623 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
MTND1P28-201ENST00000435623 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
MTND1P28-201ENST00000435623 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.45
MTND1P28-201ENST00000435623 PLSCR2Q9NRY7 297 aa12.21□□□□□ -0.45
MTND1P28-201ENST00000435623 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
MTND1P28-201ENST00000435623 CLCN6P51797 869 aa12.18□□□□□ -0.46
MTND1P28-201ENST00000435623 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
MTND1P28-201ENST00000435623 FKBP8Q14318 412 aa12.11□□□□□ -0.47
MTND1P28-201ENST00000435623 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
MTND1P28-201ENST00000435623 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
MTND1P28-201ENST00000435623 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
MTND1P28-201ENST00000435623 GALR2O43603 387 aaPredicted RBP11.96□□□□□ -0.49
MTND1P28-201ENST00000435623 POTEB2H3BUK9 544 aa11.94□□□□□ -0.5
MTND1P28-201ENST00000435623 CREBZFQ9NS37 354 aa11.93□□□□□ -0.5
MTND1P28-201ENST00000435623 PROM2Q8N271 834 aa11.9□□□□□ -0.5
MTND1P28-201ENST00000435623 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
MTND1P28-201ENST00000435623 POTEMA6NI47 508 aa11.87□□□□□ -0.51
MTND1P28-201ENST00000435623 POTEGQ6S5H5 508 aa11.83□□□□□ -0.52
MTND1P28-201ENST00000435623 PHF12Q96QT6 1004 aa11.81□□□□□ -0.52
MTND1P28-201ENST00000435623 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
MTND1P28-201ENST00000435623 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
MTND1P28-201ENST00000435623 FBXO3Q9UK99 471 aa11.74□□□□□ -0.53
MTND1P28-201ENST00000435623 POTEJP0CG39 1038 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms