RNA–Protein interactions for RNA: ENST00000433400.5

CTNNB1-207, Transcript of catenin beta 1, humanhuman

TSL 4

Gene CTNNB1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-207ENST00000433400 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
CTNNB1-207ENST00000433400 CHIC1Q5VXU3 224 aa29.49■■■□□ 2.31
CTNNB1-207ENST00000433400 PHF23Q9BUL5 403 aaPredicted RBP25.97■■□□□ 1.75
CTNNB1-207ENST00000433400 SENP3Q9H4L4 574 aaPredicted RBP25.6■■□□□ 1.69
CTNNB1-207ENST00000433400 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
CTNNB1-207ENST00000433400 FOXD1Q16676 465 aa23.81■■□□□ 1.4
CTNNB1-207ENST00000433400 ADRA2BP18089 450 aa22.93■■□□□ 1.26
CTNNB1-207ENST00000433400 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
CTNNB1-207ENST00000433400 PIAS4Q8N2W9 510 aaPredicted RBP22.46■■□□□ 1.19
CTNNB1-207ENST00000433400 MSH5O43196 834 aa21.89■■□□□ 1.09
CTNNB1-207ENST00000433400 PPP4R3CPQ6ZMV5 832 aa21.12■□□□□ 0.97
CTNNB1-207ENST00000433400 SCAF1Q9H7N4 1312 aaKnown RBP20.86■□□□□ 0.93
CTNNB1-207ENST00000433400 MAPK8IP2Q13387 824 aaPredicted RBP20.82■□□□□ 0.92
CTNNB1-207ENST00000433400 KCNA4P22459 653 aa20.67■□□□□ 0.9
CTNNB1-207ENST00000433400 NCBP3Q53F19 620 aaKnown RBP20.52■□□□□ 0.88
CTNNB1-207ENST00000433400 CNKSR2Q8WXI2 1034 aa20.48■□□□□ 0.87
CTNNB1-207ENST00000433400 DMRT2Q9Y5R5 561 aa20.43■□□□□ 0.86
CTNNB1-207ENST00000433400 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.84
CTNNB1-207ENST00000433400 RNF216Q9NWF9 866 aaPredicted RBP20.08■□□□□ 0.81
CTNNB1-207ENST00000433400 POTEDQ86YR6 584 aa20■□□□□ 0.79
CTNNB1-207ENST00000433400 HOXD11P31277 338 aaPredicted RBP19.99■□□□□ 0.79
CTNNB1-207ENST00000433400 DCAF8L1A6NGE4 600 aa19.66■□□□□ 0.74
CTNNB1-207ENST00000433400 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
CTNNB1-207ENST00000433400 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
CTNNB1-207ENST00000433400 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
CTNNB1-207ENST00000433400 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
CTNNB1-207ENST00000433400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.12■□□□□ 0.652e-13■■□□□ 11.9
CTNNB1-207ENST00000433400 ZBTB22O15209 634 aa19.03■□□□□ 0.64
CTNNB1-207ENST00000433400 FOXD4L1Q9NU39 408 aa18.98■□□□□ 0.63
CTNNB1-207ENST00000433400 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
CTNNB1-207ENST00000433400 U3KPZ7 1027 aaPredicted RBP18.81■□□□□ 0.6
CTNNB1-207ENST00000433400 RNF39Q9H2S5 420 aa18.78■□□□□ 0.6
CTNNB1-207ENST00000433400 MYCNP04198 464 aaPredicted RBP18.7■□□□□ 0.58
CTNNB1-207ENST00000433400 C1QBPQ07021 282 aaKnown RBP18.53■□□□□ 0.56
CTNNB1-207ENST00000433400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
CTNNB1-207ENST00000433400 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
CTNNB1-207ENST00000433400 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
CTNNB1-207ENST00000433400 CACNB1Q02641 598 aaPredicted RBP18.35■□□□□ 0.53
CTNNB1-207ENST00000433400 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
CTNNB1-207ENST00000433400 APLP2Q06481 763 aa18.28■□□□□ 0.52
CTNNB1-207ENST00000433400 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
CTNNB1-207ENST00000433400 CAPN15O75808 1086 aa18.24■□□□□ 0.51
CTNNB1-207ENST00000433400 ATXN8OSP0DMR3 200 aa18.23■□□□□ 0.51
CTNNB1-207ENST00000433400 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
CTNNB1-207ENST00000433400 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
CTNNB1-207ENST00000433400 ABCB7O75027 752 aa17.93■□□□□ 0.46
CTNNB1-207ENST00000433400 DSG3P32926 999 aa17.88■□□□□ 0.45
CTNNB1-207ENST00000433400 POLA2Q14181 598 aa17.83■□□□□ 0.44
CTNNB1-207ENST00000433400 MKRN4PQ13434 485 aaPredicted RBP17.46■□□□□ 0.39
CTNNB1-207ENST00000433400 ZBTB12Q9Y330 459 aaPredicted RBP17.46■□□□□ 0.39
CTNNB1-207ENST00000433400 FBLN2P98095 1184 aa17.44■□□□□ 0.38
CTNNB1-207ENST00000433400 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
CTNNB1-207ENST00000433400 FKBP8Q14318 412 aa17.11■□□□□ 0.33
CTNNB1-207ENST00000433400 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
CTNNB1-207ENST00000433400 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.32
CTNNB1-207ENST00000433400 SPDYE6P0CI01 402 aa17.02■□□□□ 0.32
CTNNB1-207ENST00000433400 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
CTNNB1-207ENST00000433400 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
CTNNB1-207ENST00000433400 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
CTNNB1-207ENST00000433400 SSUH2Q9Y2M2 353 aa16.9■□□□□ 0.3
CTNNB1-207ENST00000433400 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
CTNNB1-207ENST00000433400 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTNNB1-207ENST00000433400 PROM2Q8N271 834 aa16.7■□□□□ 0.26
CTNNB1-207ENST00000433400 REM2Q8IYK8 340 aaPredicted RBP16.68■□□□□ 0.26
CTNNB1-207ENST00000433400 SPDYE1Q8NFV5 336 aaPredicted RBP16.53■□□□□ 0.24
CTNNB1-207ENST00000433400 CLEC11AQ9Y240 323 aa16.53■□□□□ 0.24
CTNNB1-207ENST00000433400 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
CTNNB1-207ENST00000433400 STAG3Q9UJ98 1225 aa16.43■□□□□ 0.22
CTNNB1-207ENST00000433400 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
CTNNB1-207ENST00000433400 CHRDL2Q6WN34 429 aa16.35■□□□□ 0.21
CTNNB1-207ENST00000433400 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
CTNNB1-207ENST00000433400 VASPP50552 380 aaPredicted RBP16.24■□□□□ 0.19
CTNNB1-207ENST00000433400 MIER1Q8N108 512 aa16.18■□□□□ 0.18
CTNNB1-207ENST00000433400 PLCD3Q8N3E9 789 aa16.17■□□□□ 0.18
CTNNB1-207ENST00000433400 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.185e-7■■■■■ 36.6
CTNNB1-207ENST00000433400 CHADLQ6NUI6 762 aa16.15■□□□□ 0.18
CTNNB1-207ENST00000433400 PIP4P2Q8N4L2 257 aa16.15■□□□□ 0.18
CTNNB1-207ENST00000433400 CREBZFQ9NS37 354 aa16.13■□□□□ 0.17
CTNNB1-207ENST00000433400 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
CTNNB1-207ENST00000433400 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
CTNNB1-207ENST00000433400 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.16
CTNNB1-207ENST00000433400 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
CTNNB1-207ENST00000433400 MNX1P50219 401 aaPredicted RBP15.94■□□□□ 0.14
CTNNB1-207ENST00000433400 FARP1Q9Y4F1 1045 aaPredicted RBP15.93■□□□□ 0.14
CTNNB1-207ENST00000433400 ZBTB47Q9UFB7 747 aaPredicted RBP15.9■□□□□ 0.14
CTNNB1-207ENST00000433400 POTEHQ6S545 545 aa15.83■□□□□ 0.12
CTNNB1-207ENST00000433400 NPM1P06748 294 aaKnown RBP eCLIP15.82■□□□□ 0.12
CTNNB1-207ENST00000433400 SPOCK2Q92563 424 aa15.81■□□□□ 0.12
CTNNB1-207ENST00000433400 NUBP1P53384 320 aa15.74■□□□□ 0.11
CTNNB1-207ENST00000433400 RASEFQ8IZ41 740 aa15.72■□□□□ 0.11
CTNNB1-207ENST00000433400 HAX1O00165 279 aa15.65■□□□□ 0.1
CTNNB1-207ENST00000433400 TSPYL2Q9H2G4 693 aaPredicted RBP15.65■□□□□ 0.1
CTNNB1-207ENST00000433400 CD44P16070 742 aaKnown RBP15.64■□□□□ 0.09
CTNNB1-207ENST00000433400 DCAF8Q5TAQ9 597 aa15.63■□□□□ 0.09
CTNNB1-207ENST00000433400 CIZ1Q9ULV3 898 aaPredicted RBP15.63■□□□□ 0.09
CTNNB1-207ENST00000433400 FAM212AQ96EL1 285 aa15.62■□□□□ 0.09
CTNNB1-207ENST00000433400 C19orf67A6NJJ6 358 aa15.61■□□□□ 0.09
CTNNB1-207ENST00000433400 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
CTNNB1-207ENST00000433400 ZRANB1Q9UGI0 708 aa15.56■□□□□ 0.08
CTNNB1-207ENST00000433400 RTN4Q9NQC3 1192 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms