RNA–Protein interactions for RNA: ENST00000432423.1

AC006055.1-201, humanhuman

TSL 3 BASIC

Gene AC006055.1, Length 411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006055.1-201ENST00000432423 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
AC006055.1-201ENST00000432423 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
AC006055.1-201ENST00000432423 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
AC006055.1-201ENST00000432423 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
AC006055.1-201ENST00000432423 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
AC006055.1-201ENST00000432423 FOXD1Q16676 465 aa19.91■□□□□ 0.78
AC006055.1-201ENST00000432423 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
AC006055.1-201ENST00000432423 ADRA2BP18089 450 aa19.4■□□□□ 0.7
AC006055.1-201ENST00000432423 PIAS4Q8N2W9 510 aaPredicted RBP18.75■□□□□ 0.59
AC006055.1-201ENST00000432423 MSH5O43196 834 aa18.09■□□□□ 0.49
AC006055.1-201ENST00000432423 PPP4R3CPQ6ZMV5 832 aa18.02■□□□□ 0.48
AC006055.1-201ENST00000432423 KCNA4P22459 653 aa17.98■□□□□ 0.47
AC006055.1-201ENST00000432423 MAPK8IP2Q13387 824 aaPredicted RBP17.56■□□□□ 0.4
AC006055.1-201ENST00000432423 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
AC006055.1-201ENST00000432423 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
AC006055.1-201ENST00000432423 NPM3O75607 178 aaKnown RBP17.41■□□□□ 0.38
AC006055.1-201ENST00000432423 CNKSR2Q8WXI2 1034 aa17.41■□□□□ 0.38
AC006055.1-201ENST00000432423 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
AC006055.1-201ENST00000432423 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
AC006055.1-201ENST00000432423 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
AC006055.1-201ENST00000432423 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
AC006055.1-201ENST00000432423 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
AC006055.1-201ENST00000432423 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
AC006055.1-201ENST00000432423 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
AC006055.1-201ENST00000432423 ZBTB22O15209 634 aa16.62■□□□□ 0.25
AC006055.1-201ENST00000432423 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
AC006055.1-201ENST00000432423 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
AC006055.1-201ENST00000432423 DCAF8L1A6NGE4 600 aa16.31■□□□□ 0.2
AC006055.1-201ENST00000432423 POTEDQ86YR6 584 aa16.12■□□□□ 0.17
AC006055.1-201ENST00000432423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
AC006055.1-201ENST00000432423 MYCNP04198 464 aaPredicted RBP15.97■□□□□ 0.15
AC006055.1-201ENST00000432423 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
AC006055.1-201ENST00000432423 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
AC006055.1-201ENST00000432423 ATF5Q9Y2D1 282 aaPredicted RBP15.71■□□□□ 0.11
AC006055.1-201ENST00000432423 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
AC006055.1-201ENST00000432423 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
AC006055.1-201ENST00000432423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
AC006055.1-201ENST00000432423 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
AC006055.1-201ENST00000432423 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
AC006055.1-201ENST00000432423 C1QBPQ07021 282 aaKnown RBP15.38■□□□□ 0.05
AC006055.1-201ENST00000432423 APLP2Q06481 763 aa15.32■□□□□ 0.04
AC006055.1-201ENST00000432423 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
AC006055.1-201ENST00000432423 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
AC006055.1-201ENST00000432423 CAPN15O75808 1086 aa15.21■□□□□ 0.03
AC006055.1-201ENST00000432423 POLA2Q14181 598 aa15.09■□□□□ 0.01
AC006055.1-201ENST00000432423 ABCB7O75027 752 aa15.02■□□□□ -0
AC006055.1-201ENST00000432423 MKRN4PQ13434 485 aaPredicted RBP15.02■□□□□ -0
AC006055.1-201ENST00000432423 FKBP8Q14318 412 aa14.99□□□□□ -0.01
AC006055.1-201ENST00000432423 DSG3P32926 999 aa14.98□□□□□ -0.01
AC006055.1-201ENST00000432423 CACNB1Q02641 598 aaPredicted RBP14.95□□□□□ -0.02
AC006055.1-201ENST00000432423 FBLN2P98095 1184 aa14.79□□□□□ -0.04
AC006055.1-201ENST00000432423 ZBTB12Q9Y330 459 aaPredicted RBP14.71□□□□□ -0.05
AC006055.1-201ENST00000432423 SPDYE4A6NLX3 237 aa14.7□□□□□ -0.06
AC006055.1-201ENST00000432423 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
AC006055.1-201ENST00000432423 PROM2Q8N271 834 aa14.57□□□□□ -0.08
AC006055.1-201ENST00000432423 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
AC006055.1-201ENST00000432423 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
AC006055.1-201ENST00000432423 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
AC006055.1-201ENST00000432423 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
AC006055.1-201ENST00000432423 SSUH2Q9Y2M2 353 aa14.41□□□□□ -0.1
AC006055.1-201ENST00000432423 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.13
AC006055.1-201ENST00000432423 FBXO3Q9UK99 471 aa14.27□□□□□ -0.13
AC006055.1-201ENST00000432423 RTN4Q9NQC3 1192 aaKnown RBP14.19□□□□□ -0.14
AC006055.1-201ENST00000432423 VASPP50552 380 aaPredicted RBP14.17□□□□□ -0.14
AC006055.1-201ENST00000432423 RBM42Q9BTD8 480 aaKnown RBP14.11□□□□□ -0.15
AC006055.1-201ENST00000432423 AMER1Q5JTC6 1135 aaPredicted RBP14.07□□□□□ -0.16
AC006055.1-201ENST00000432423 IFNLR1Q8IU57 520 aaPredicted RBP14.07□□□□□ -0.16
AC006055.1-201ENST00000432423 AKT1S1Q96B36 256 aa14.07□□□□□ -0.16
AC006055.1-201ENST00000432423 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
AC006055.1-201ENST00000432423 REM2Q8IYK8 340 aaPredicted RBP14□□□□□ -0.17
AC006055.1-201ENST00000432423 ABCC9O60706 1549 aa13.94□□□□□ -0.18
AC006055.1-201ENST00000432423 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
AC006055.1-201ENST00000432423 MIER1Q8N108 512 aa13.88□□□□□ -0.19
AC006055.1-201ENST00000432423 PLCD3Q8N3E9 789 aa13.85□□□□□ -0.19
AC006055.1-201ENST00000432423 CLEC11AQ9Y240 323 aa13.85□□□□□ -0.19
AC006055.1-201ENST00000432423 PITPNM1O00562 1244 aa13.84□□□□□ -0.19
AC006055.1-201ENST00000432423 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
AC006055.1-201ENST00000432423 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
AC006055.1-201ENST00000432423 NISCHQ9Y2I1 1504 aa13.77□□□□□ -0.21
AC006055.1-201ENST00000432423 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
AC006055.1-201ENST00000432423 SPOCK2Q92563 424 aa13.76□□□□□ -0.21
AC006055.1-201ENST00000432423 CREBZFQ9NS37 354 aa13.75□□□□□ -0.21
AC006055.1-201ENST00000432423 PKD2Q13563 968 aa13.72□□□□□ -0.21
AC006055.1-201ENST00000432423 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
AC006055.1-201ENST00000432423 PLEKHG5O94827 1062 aa13.63□□□□□ -0.23
AC006055.1-201ENST00000432423 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
AC006055.1-201ENST00000432423 NUBP1P53384 320 aa13.59□□□□□ -0.23
AC006055.1-201ENST00000432423 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
AC006055.1-201ENST00000432423 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.24
AC006055.1-201ENST00000432423 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
AC006055.1-201ENST00000432423 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
AC006055.1-201ENST00000432423 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
AC006055.1-201ENST00000432423 PRKAR2AP13861 404 aaKnown RBP13.46□□□□□ -0.25
AC006055.1-201ENST00000432423 RASEFQ8IZ41 740 aa13.46□□□□□ -0.25
AC006055.1-201ENST00000432423 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
AC006055.1-201ENST00000432423 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
AC006055.1-201ENST00000432423 RGL2O15211 777 aa13.42□□□□□ -0.26
AC006055.1-201ENST00000432423 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
AC006055.1-201ENST00000432423 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
AC006055.1-201ENST00000432423 GSE1Q14687 1217 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms