RNA–Protein interactions for RNA: ENST00000430598.5

HERC2P3-208, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene HERC2P3, Length 4,279 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-208ENST00000430598 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
HERC2P3-208ENST00000430598 CCDC180Q9P1Z9 1646 aa23.42■■□□□ 1.34
HERC2P3-208ENST00000430598 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
HERC2P3-208ENST00000430598 ZCCHC6Q5VYS8 1495 aaKnown RBP23.12■■□□□ 1.29
HERC2P3-208ENST00000430598 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
HERC2P3-208ENST00000430598 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
HERC2P3-208ENST00000430598 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
HERC2P3-208ENST00000430598 ABCC9O60706 1549 aa22.07■■□□□ 1.12
HERC2P3-208ENST00000430598 SCRIBQ14160 1630 aa22■■□□□ 1.11
HERC2P3-208ENST00000430598 MYO15BQ96JP2 1530 aa21.88■■□□□ 1.09
HERC2P3-208ENST00000430598 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
HERC2P3-208ENST00000430598 NACADO15069 1562 aa21.73■■□□□ 1.07
HERC2P3-208ENST00000430598 RSF1Q96T23 1441 aaPredicted RBP21.6■■□□□ 1.05
HERC2P3-208ENST00000430598 CECR2Q9BXF3 1484 aa21.47■■□□□ 1.03
HERC2P3-208ENST00000430598 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
HERC2P3-208ENST00000430598 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
HERC2P3-208ENST00000430598 LOC105371045A0A1W2PR82 267 aa21.26■□□□□ 0.99
HERC2P3-208ENST00000430598 WIZO95785 1651 aa21.23■□□□□ 0.99
HERC2P3-208ENST00000430598 UNC13AQ9UPW8 1703 aa21.2■□□□□ 0.98
HERC2P3-208ENST00000430598 TRIM41Q8WV44 630 aa21.11■□□□□ 0.97
HERC2P3-208ENST00000430598 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.97
HERC2P3-208ENST00000430598 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.96
HERC2P3-208ENST00000430598 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
HERC2P3-208ENST00000430598 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
HERC2P3-208ENST00000430598 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
HERC2P3-208ENST00000430598 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
HERC2P3-208ENST00000430598 EHMT2Q96KQ7 1210 aa20.89■□□□□ 0.93
HERC2P3-208ENST00000430598 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.93
HERC2P3-208ENST00000430598 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
HERC2P3-208ENST00000430598 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
HERC2P3-208ENST00000430598 SMARCA2P51531 1590 aa20.73■□□□□ 0.91
HERC2P3-208ENST00000430598 ABCC8Q09428 1581 aa20.67■□□□□ 0.9
HERC2P3-208ENST00000430598 HRCP23327 699 aa20.63■□□□□ 0.89
HERC2P3-208ENST00000430598 PEG3Q9GZU2 1588 aa20.52■□□□□ 0.88
HERC2P3-208ENST00000430598 TRIM26Q12899 539 aaPredicted RBP20.51■□□□□ 0.87
HERC2P3-208ENST00000430598 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
HERC2P3-208ENST00000430598 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
HERC2P3-208ENST00000430598 SOGA1O94964 1423 aa20.4■□□□□ 0.86
HERC2P3-208ENST00000430598 PPARGC1BQ86YN6 1023 aaKnown RBP20.37■□□□□ 0.85
HERC2P3-208ENST00000430598 RUSC2Q8N2Y8 1516 aa20.33■□□□□ 0.85
HERC2P3-208ENST00000430598 WRNQ14191 1432 aaPredicted RBP eCLIP20.31■□□□□ 0.84
HERC2P3-208ENST00000430598 CSRNP3Q8WYN3 585 aa20.24■□□□□ 0.83
HERC2P3-208ENST00000430598 SYNJ1O43426 1573 aa20.23■□□□□ 0.83
HERC2P3-208ENST00000430598 UBTFP17480 764 aaKnown RBP20.18■□□□□ 0.82
HERC2P3-208ENST00000430598 EEA1Q15075 1411 aa20.15■□□□□ 0.82
HERC2P3-208ENST00000430598 CEP162Q5TB80 1403 aa20.14■□□□□ 0.81
HERC2P3-208ENST00000430598 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
HERC2P3-208ENST00000430598 NCAPD3P42695 1498 aa20.12■□□□□ 0.81
HERC2P3-208ENST00000430598 TNIKQ9UKE5 1360 aa20.09■□□□□ 0.81
HERC2P3-208ENST00000430598 HMGXB3Q12766 1538 aa20.08■□□□□ 0.8
HERC2P3-208ENST00000430598 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
HERC2P3-208ENST00000430598 TOP2BQ02880 1626 aa19.97■□□□□ 0.79
HERC2P3-208ENST00000430598 CEP164Q9UPV0 1460 aa19.95■□□□□ 0.78
HERC2P3-208ENST00000430598 RANGAP1P46060 587 aaPredicted RBP19.94■□□□□ 0.78
HERC2P3-208ENST00000430598 KIF21BO75037 1637 aa19.91■□□□□ 0.78
HERC2P3-208ENST00000430598 RAPGEF2Q9Y4G8 1499 aa19.91■□□□□ 0.78
HERC2P3-208ENST00000430598 BIVM-ERCC5R4GMW8 1640 aa19.9■□□□□ 0.78
HERC2P3-208ENST00000430598 CFTRP13569 1480 aa19.88■□□□□ 0.77
HERC2P3-208ENST00000430598 CUX1P39880 1505 aa19.88■□□□□ 0.77
HERC2P3-208ENST00000430598 ZEB1P37275 1124 aaPredicted RBP19.87■□□□□ 0.77
HERC2P3-208ENST00000430598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.85■□□□□ 0.77
HERC2P3-208ENST00000430598 CC2D2AQ9P2K1 1620 aa19.83■□□□□ 0.76
HERC2P3-208ENST00000430598 CLIP1P30622 1438 aa19.83■□□□□ 0.76
HERC2P3-208ENST00000430598 CADPSQ9ULU8 1353 aa19.74■□□□□ 0.75
HERC2P3-208ENST00000430598 CCER1Q8TC90 406 aaPredicted RBP19.74■□□□□ 0.75
HERC2P3-208ENST00000430598 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
HERC2P3-208ENST00000430598 PRXQ9BXM0 1461 aa19.7■□□□□ 0.74
HERC2P3-208ENST00000430598 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
HERC2P3-208ENST00000430598 VPS8Q8N3P4 1428 aa19.68■□□□□ 0.74
HERC2P3-208ENST00000430598 ERICH3Q5RHP9 1530 aa19.63■□□□□ 0.73
HERC2P3-208ENST00000430598 APLP2Q06481 763 aa19.62■□□□□ 0.73
HERC2P3-208ENST00000430598 CUX2O14529 1486 aa19.61■□□□□ 0.73
HERC2P3-208ENST00000430598 FGD5Q6ZNL6 1462 aa19.58■□□□□ 0.73
HERC2P3-208ENST00000430598 NESP48681 1621 aa19.58■□□□□ 0.72
HERC2P3-208ENST00000430598 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
HERC2P3-208ENST00000430598 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
HERC2P3-208ENST00000430598 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
HERC2P3-208ENST00000430598 IGF1RP08069 1367 aa19.52■□□□□ 0.72
HERC2P3-208ENST00000430598 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.71
HERC2P3-208ENST00000430598 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
HERC2P3-208ENST00000430598 KANK4Q5T7N3 995 aaPredicted RBP19.45■□□□□ 0.7
HERC2P3-208ENST00000430598 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
HERC2P3-208ENST00000430598 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
HERC2P3-208ENST00000430598 TOPBP1Q92547 1522 aa19.4■□□□□ 0.7
HERC2P3-208ENST00000430598 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
HERC2P3-208ENST00000430598 POLA1P09884 1462 aaPredicted RBP19.38■□□□□ 0.69
HERC2P3-208ENST00000430598 P3H3Q8IVL6 736 aa19.33■□□□□ 0.68
HERC2P3-208ENST00000430598 LAMC3Q9Y6N6 1575 aa19.31■□□□□ 0.68
HERC2P3-208ENST00000430598 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
HERC2P3-208ENST00000430598 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
HERC2P3-208ENST00000430598 TDRD9Q8NDG6 1382 aaKnown RBP19.24■□□□□ 0.67
HERC2P3-208ENST00000430598 ATP1B4Q9UN42 357 aaPredicted RBP19.23■□□□□ 0.67
HERC2P3-208ENST00000430598 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
HERC2P3-208ENST00000430598 KIF21AQ7Z4S6 1674 aa19.21■□□□□ 0.67
HERC2P3-208ENST00000430598 ITGAEP38570 1179 aa19.21■□□□□ 0.67
HERC2P3-208ENST00000430598 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
HERC2P3-208ENST00000430598 WDR97A6NE52 1622 aa19.15■□□□□ 0.66
HERC2P3-208ENST00000430598 DIEXFQ68CQ4 756 aaKnown RBP19.15■□□□□ 0.66
HERC2P3-208ENST00000430598 RRBP1Q9P2E9 1410 aaKnown RBP19.15■□□□□ 0.66
HERC2P3-208ENST00000430598 TIAM1Q13009 1591 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms