RNA–Protein interactions for RNA: ENST00000430352.6

ABCA8-203, Transcript of ATP binding cassette subfamily A member 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCA8, Length 5,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-203ENST00000430352 DCAF8L2P0C7V8 631 aa17.54■□□□□ 0.4
ABCA8-203ENST00000430352 NISCHQ9Y2I1 1504 aa16.37■□□□□ 0.21
ABCA8-203ENST00000430352 SUPT5HO00267 1087 aaKnown RBP16.13■□□□□ 0.17
ABCA8-203ENST00000430352 FAM9AQ8IZU1 332 aaPredicted RBP15.92■□□□□ 0.14
ABCA8-203ENST00000430352 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
ABCA8-203ENST00000430352 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
ABCA8-203ENST00000430352 APLP2Q06481 763 aa15.72■□□□□ 0.11
ABCA8-203ENST00000430352 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
ABCA8-203ENST00000430352 ATP1B4Q9UN42 357 aaPredicted RBP15.28■□□□□ 0.04
ABCA8-203ENST00000430352 RANGAP1P46060 587 aaPredicted RBP15.26■□□□□ 0.03
ABCA8-203ENST00000430352 TTBK1Q5TCY1 1321 aaPredicted RBP15.19■□□□□ 0.02
ABCA8-203ENST00000430352 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
ABCA8-203ENST00000430352 MYT1LQ9UL68 1186 aa14.99□□□□□ -0.01
ABCA8-203ENST00000430352 UBTFP17480 764 aaKnown RBP14.98□□□□□ -0.01
ABCA8-203ENST00000430352 PCGF6Q9BYE7 350 aa14.85□□□□□ -0.03
ABCA8-203ENST00000430352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
ABCA8-203ENST00000430352 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
ABCA8-203ENST00000430352 CCER1Q8TC90 406 aaPredicted RBP14.72□□□□□ -0.05
ABCA8-203ENST00000430352 ERICH6Q7L0X2 663 aa14.66□□□□□ -0.06
ABCA8-203ENST00000430352 CHIC1Q5VXU3 224 aa14.61□□□□□ -0.07
ABCA8-203ENST00000430352 ZEB1P37275 1124 aaPredicted RBP14.59□□□□□ -0.07
ABCA8-203ENST00000430352 CENPBP07199 599 aaPredicted RBP14.54□□□□□ -0.08
ABCA8-203ENST00000430352 NEFLP07196 543 aa14.5□□□□□ -0.09
ABCA8-203ENST00000430352 POLR3GLQ9BT43 218 aa14.49□□□□□ -0.09
ABCA8-203ENST00000430352 ITGAEP38570 1179 aa14.48□□□□□ -0.09
ABCA8-203ENST00000430352 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
ABCA8-203ENST00000430352 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
ABCA8-203ENST00000430352 ABCC9O60706 1549 aa14.39□□□□□ -0.11
ABCA8-203ENST00000430352 PPARGC1BQ86YN6 1023 aaKnown RBP14.39□□□□□ -0.11
ABCA8-203ENST00000430352 FBLN2P98095 1184 aa14.32□□□□□ -0.12
ABCA8-203ENST00000430352 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.12
ABCA8-203ENST00000430352 CNGB1Q14028 1251 aaPredicted RBP14.23□□□□□ -0.13
ABCA8-203ENST00000430352 DAXXQ9UER7 740 aaPredicted RBP14.22□□□□□ -0.13
ABCA8-203ENST00000430352 TRIM26Q12899 539 aaPredicted RBP14.17□□□□□ -0.14
ABCA8-203ENST00000430352 BCANQ96GW7 911 aa14.16□□□□□ -0.14
ABCA8-203ENST00000430352 FAM50AQ14320 339 aaKnown RBP14.15□□□□□ -0.14
ABCA8-203ENST00000430352 TRIM52Q96A61 297 aa14.15□□□□□ -0.14
ABCA8-203ENST00000430352 LOC105371045A0A1W2PR82 267 aa14.11□□□□□ -0.15
ABCA8-203ENST00000430352 ESF1Q9H501 851 aaKnown RBP14.08□□□□□ -0.16
ABCA8-203ENST00000430352 SLC24A1O60721 1099 aa14□□□□□ -0.17
ABCA8-203ENST00000430352 MYT1Q01538 1121 aa14□□□□□ -0.17
ABCA8-203ENST00000430352 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
ABCA8-203ENST00000430352 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
ABCA8-203ENST00000430352 ZNF326Q5BKZ1 582 aaKnown RBP13.96□□□□□ -0.17
ABCA8-203ENST00000430352 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
ABCA8-203ENST00000430352 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
ABCA8-203ENST00000430352 ARID3CA6NKF2 412 aa13.91□□□□□ -0.18
ABCA8-203ENST00000430352 NEFMP07197 916 aa13.91□□□□□ -0.18
ABCA8-203ENST00000430352 HRCP23327 699 aa13.89□□□□□ -0.19
ABCA8-203ENST00000430352 NEUROD1Q13562 356 aa13.89□□□□□ -0.19
ABCA8-203ENST00000430352 STAG3Q9UJ98 1225 aa13.89□□□□□ -0.19
ABCA8-203ENST00000430352 CDK11AQ9UQ88 783 aaPredicted RBP13.87□□□□□ -0.19
ABCA8-203ENST00000430352 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
ABCA8-203ENST00000430352 ZNF316A6NFI3 1004 aaPredicted RBP13.84□□□□□ -0.19
ABCA8-203ENST00000430352 P3H3Q8IVL6 736 aa13.84□□□□□ -0.19
ABCA8-203ENST00000430352 CHGAP10645 457 aaKnown RBP13.77□□□□□ -0.21
ABCA8-203ENST00000430352 CANXP27824 592 aaKnown RBP13.74□□□□□ -0.21
ABCA8-203ENST00000430352 SCRIBQ14160 1630 aa13.7□□□□□ -0.22
ABCA8-203ENST00000430352 BCL11AQ9H165 835 aa13.69□□□□□ -0.22
ABCA8-203ENST00000430352 ANP32CO43423 234 aa13.67□□□□□ -0.22
ABCA8-203ENST00000430352 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
ABCA8-203ENST00000430352 CHMP7Q8WUX9 453 aaPredicted RBP13.62□□□□□ -0.23
ABCA8-203ENST00000430352 DIEXFQ68CQ4 756 aaKnown RBP13.62□□□□□ -0.23
ABCA8-203ENST00000430352 RTL5Q5HYW3 569 aaPredicted RBP13.6□□□□□ -0.23
ABCA8-203ENST00000430352 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
ABCA8-203ENST00000430352 ZCCHC6Q5VYS8 1495 aaKnown RBP13.56□□□□□ -0.24
ABCA8-203ENST00000430352 A0A0G2JS52 829 aa13.55□□□□□ -0.24
ABCA8-203ENST00000430352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.55□□□□□ -0.24
ABCA8-203ENST00000430352 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
ABCA8-203ENST00000430352 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
ABCA8-203ENST00000430352 ARID4BQ4LE39 1312 aaPredicted RBP13.49□□□□□ -0.25
ABCA8-203ENST00000430352 TSPY4P0CV99 314 aa13.49□□□□□ -0.25
ABCA8-203ENST00000430352 TSPY10P0CW01 314 aa13.49□□□□□ -0.25
ABCA8-203ENST00000430352 PPP1R15AO75807 674 aaPredicted RBP13.48□□□□□ -0.25
ABCA8-203ENST00000430352 NPM2Q86SE8 214 aaKnown RBP13.47□□□□□ -0.25
ABCA8-203ENST00000430352 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
ABCA8-203ENST00000430352 ZBTB7CA1YPR0 619 aa13.44□□□□□ -0.26
ABCA8-203ENST00000430352 KCNH8Q96L42 1107 aa13.42□□□□□ -0.26
ABCA8-203ENST00000430352 TONSLQ96HA7 1378 aa13.4□□□□□ -0.26
ABCA8-203ENST00000430352 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
ABCA8-203ENST00000430352 CHIC2Q9UKJ5 165 aa13.39□□□□□ -0.27
ABCA8-203ENST00000430352 ERCC6Q03468 1493 aa13.38□□□□□ -0.27
ABCA8-203ENST00000430352 TRHP20396 242 aaPredicted RBP13.38□□□□□ -0.27
ABCA8-203ENST00000430352 RB1CC1Q8TDY2 1594 aa13.36□□□□□ -0.27
ABCA8-203ENST00000430352 PLEKHD1A6NEE1 506 aa13.34□□□□□ -0.27
ABCA8-203ENST00000430352 MTUS2Q5JR59 1369 aa13.33□□□□□ -0.27
ABCA8-203ENST00000430352 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
ABCA8-203ENST00000430352 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
ABCA8-203ENST00000430352 WDR43Q15061 677 aaKnown RBP eCLIP13.28□□□□□ -0.28
ABCA8-203ENST00000430352 HSP90AA1P07900 732 aaKnown RBP13.27□□□□□ -0.29
ABCA8-203ENST00000430352 GTF3C3Q9Y5Q9 886 aa13.24□□□□□ -0.29
ABCA8-203ENST00000430352 UPF2Q9HAU5 1272 aaKnown RBP13.23□□□□□ -0.29
ABCA8-203ENST00000430352 ARXQ96QS3 562 aa13.21□□□□□ -0.29
ABCA8-203ENST00000430352 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.21□□□□□ -0.3
ABCA8-203ENST00000430352 TMC1Q8TDI8 760 aa13.2□□□□□ -0.3
ABCA8-203ENST00000430352 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
ABCA8-203ENST00000430352 MYH16Q9H6N6 1097 aa13.19□□□□□ -0.3
ABCA8-203ENST00000430352 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
ABCA8-203ENST00000430352 SALL2Q9Y467 1007 aaPredicted RBP13.19□□□□□ -0.3
ABCA8-203ENST00000430352 DCAF1Q9Y4B6 1507 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms