RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 NISCHQ9Y2I1 1504 aa34.69■■■■□ 3.14
PCDH8P1-201ENST00000428983 SHROOM4Q9ULL8 1493 aa30.08■■■□□ 2.41
PCDH8P1-201ENST00000428983 DCAF8L2P0C7V8 631 aa29.52■■■□□ 2.32
PCDH8P1-201ENST00000428983 SUPT5HO00267 1087 aaKnown RBP29.4■■■□□ 2.3
PCDH8P1-201ENST00000428983 CCDC180Q9P1Z9 1646 aa29.27■■■□□ 2.28
PCDH8P1-201ENST00000428983 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
PCDH8P1-201ENST00000428983 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
PCDH8P1-201ENST00000428983 HRCP23327 699 aa28.17■■■□□ 2.1
PCDH8P1-201ENST00000428983 MYO15BQ96JP2 1530 aa28.15■■■□□ 2.1
PCDH8P1-201ENST00000428983 DCAF1Q9Y4B6 1507 aa28.15■■■□□ 2.1
PCDH8P1-201ENST00000428983 PCGF6Q9BYE7 350 aa27.91■■■□□ 2.06
PCDH8P1-201ENST00000428983 SCRIBQ14160 1630 aa27.9■■■□□ 2.06
PCDH8P1-201ENST00000428983 ABCC9O60706 1549 aa27.88■■■□□ 2.05
PCDH8P1-201ENST00000428983 PPARGC1BQ86YN6 1023 aaKnown RBP27.82■■■□□ 2.04
PCDH8P1-201ENST00000428983 LOC105371045A0A1W2PR82 267 aa27.68■■■□□ 2.02
PCDH8P1-201ENST00000428983 RSF1Q96T23 1441 aaPredicted RBP27.51■■■□□ 2
PCDH8P1-201ENST00000428983 CECR2Q9BXF3 1484 aa27.34■■□□□ 1.97
PCDH8P1-201ENST00000428983 EHMT2Q96KQ7 1210 aa27.31■■□□□ 1.96
PCDH8P1-201ENST00000428983 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
PCDH8P1-201ENST00000428983 RB1CC1Q8TDY2 1594 aa27.25■■□□□ 1.95
PCDH8P1-201ENST00000428983 NACADO15069 1562 aa27.21■■□□□ 1.95
PCDH8P1-201ENST00000428983 TRIM41Q8WV44 630 aa27.18■■□□□ 1.94
PCDH8P1-201ENST00000428983 MROH2BQ7Z745 1585 aa27.12■■□□□ 1.93
PCDH8P1-201ENST00000428983 WIZO95785 1651 aa26.98■■□□□ 1.91
PCDH8P1-201ENST00000428983 TRIM26Q12899 539 aaPredicted RBP26.95■■□□□ 1.91
PCDH8P1-201ENST00000428983 PABPN1Q86U42 306 aaKnown RBP eCLIP26.84■■□□□ 1.89
PCDH8P1-201ENST00000428983 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
PCDH8P1-201ENST00000428983 UNC13AQ9UPW8 1703 aa26.58■■□□□ 1.85
PCDH8P1-201ENST00000428983 SCAF1Q9H7N4 1312 aaKnown RBP26.54■■□□□ 1.84
PCDH8P1-201ENST00000428983 ZEB1P37275 1124 aaPredicted RBP26.49■■□□□ 1.83
PCDH8P1-201ENST00000428983 SMARCA4P51532 1647 aa26.44■■□□□ 1.82
PCDH8P1-201ENST00000428983 ABCC8Q09428 1581 aa26.43■■□□□ 1.82
PCDH8P1-201ENST00000428983 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
PCDH8P1-201ENST00000428983 PELP1Q8IZL8 1130 aaKnown RBP26.41■■□□□ 1.82
PCDH8P1-201ENST00000428983 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.8
PCDH8P1-201ENST00000428983 TTBK1Q5TCY1 1321 aaPredicted RBP26.31■■□□□ 1.8
PCDH8P1-201ENST00000428983 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
PCDH8P1-201ENST00000428983 BICRAQ9NZM4 1560 aa26.28■■□□□ 1.8
PCDH8P1-201ENST00000428983 SMARCA2P51531 1590 aa26.27■■□□□ 1.8
PCDH8P1-201ENST00000428983 SOGA1O94964 1423 aa26.17■■□□□ 1.78
PCDH8P1-201ENST00000428983 RUSC2Q8N2Y8 1516 aa26.11■■□□□ 1.77
PCDH8P1-201ENST00000428983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.01■■□□□ 1.75
PCDH8P1-201ENST00000428983 UBTFP17480 764 aaKnown RBP25.99■■□□□ 1.75
PCDH8P1-201ENST00000428983 NEUROD1Q13562 356 aa25.96■■□□□ 1.75
PCDH8P1-201ENST00000428983 CSRNP3Q8WYN3 585 aa25.92■■□□□ 1.74
PCDH8P1-201ENST00000428983 ACIN1Q9UKV3 1341 aaKnown RBP25.92■■□□□ 1.74
PCDH8P1-201ENST00000428983 RANGAP1P46060 587 aaPredicted RBP25.88■■□□□ 1.73
PCDH8P1-201ENST00000428983 ATAD2BQ9ULI0 1458 aa25.88■■□□□ 1.73
PCDH8P1-201ENST00000428983 CCER1Q8TC90 406 aaPredicted RBP25.86■■□□□ 1.73
PCDH8P1-201ENST00000428983 WRNQ14191 1432 aaPredicted RBP eCLIP25.84■■□□□ 1.73
PCDH8P1-201ENST00000428983 CEP162Q5TB80 1403 aa25.84■■□□□ 1.73
PCDH8P1-201ENST00000428983 BAZ1BQ9UIG0 1483 aaKnown RBP25.81■■□□□ 1.72
PCDH8P1-201ENST00000428983 GTF3C3Q9Y5Q9 886 aa25.76■■□□□ 1.71
PCDH8P1-201ENST00000428983 PEG3Q9GZU2 1588 aa25.74■■□□□ 1.71
PCDH8P1-201ENST00000428983 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
PCDH8P1-201ENST00000428983 DIEXFQ68CQ4 756 aaKnown RBP25.71■■□□□ 1.71
PCDH8P1-201ENST00000428983 TNIKQ9UKE5 1360 aa25.68■■□□□ 1.7
PCDH8P1-201ENST00000428983 GOLGA3Q08378 1498 aa25.56■■□□□ 1.68
PCDH8P1-201ENST00000428983 CENPBP07199 599 aaPredicted RBP25.56■■□□□ 1.68
PCDH8P1-201ENST00000428983 EEA1Q15075 1411 aa25.55■■□□□ 1.68
PCDH8P1-201ENST00000428983 RAPGEF2Q9Y4G8 1499 aa25.46■■□□□ 1.67
PCDH8P1-201ENST00000428983 HNRNPUL2Q1KMD3 747 aaKnown RBP25.42■■□□□ 1.66
PCDH8P1-201ENST00000428983 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
PCDH8P1-201ENST00000428983 CLIP1P30622 1438 aa25.39■■□□□ 1.65
PCDH8P1-201ENST00000428983 YTHDC1Q96MU7 727 aaKnown RBP25.38■■□□□ 1.65
PCDH8P1-201ENST00000428983 NCAPD3P42695 1498 aa25.29■■□□□ 1.64
PCDH8P1-201ENST00000428983 TOP2BQ02880 1626 aa25.26■■□□□ 1.63
PCDH8P1-201ENST00000428983 KIF21BO75037 1637 aa25.26■■□□□ 1.63
PCDH8P1-201ENST00000428983 ZNF316A6NFI3 1004 aaPredicted RBP25.26■■□□□ 1.63
PCDH8P1-201ENST00000428983 APLP2Q06481 763 aa25.22■■□□□ 1.63
PCDH8P1-201ENST00000428983 CUX1P39880 1505 aa25.21■■□□□ 1.63
PCDH8P1-201ENST00000428983 MYT1Q01538 1121 aa25.16■■□□□ 1.62
PCDH8P1-201ENST00000428983 VPS8Q8N3P4 1428 aa25.16■■□□□ 1.62
PCDH8P1-201ENST00000428983 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
PCDH8P1-201ENST00000428983 MIER1Q8N108 512 aa25.15■■□□□ 1.62
PCDH8P1-201ENST00000428983 BIVM-ERCC5R4GMW8 1640 aa25.1■■□□□ 1.61
PCDH8P1-201ENST00000428983 CFTRP13569 1480 aa25.09■■□□□ 1.61
PCDH8P1-201ENST00000428983 KANK4Q5T7N3 995 aaPredicted RBP25.08■■□□□ 1.61
PCDH8P1-201ENST00000428983 PRXQ9BXM0 1461 aa25.04■■□□□ 1.6
PCDH8P1-201ENST00000428983 KIF27Q86VH2 1401 aa25■■□□□ 1.59
PCDH8P1-201ENST00000428983 ARAP1Q96P48 1450 aa24.96■■□□□ 1.59
PCDH8P1-201ENST00000428983 CUX2O14529 1486 aa24.93■■□□□ 1.58
PCDH8P1-201ENST00000428983 ITGAEP38570 1179 aa24.93■■□□□ 1.58
PCDH8P1-201ENST00000428983 CADPSQ9ULU8 1353 aa24.92■■□□□ 1.58
PCDH8P1-201ENST00000428983 P3H3Q8IVL6 736 aa24.9■■□□□ 1.58
PCDH8P1-201ENST00000428983 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.57
PCDH8P1-201ENST00000428983 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
PCDH8P1-201ENST00000428983 DNAJC5BQ9UF47 199 aa24.86■■□□□ 1.57
PCDH8P1-201ENST00000428983 IGF1RP08069 1367 aa24.85■■□□□ 1.57
PCDH8P1-201ENST00000428983 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
PCDH8P1-201ENST00000428983 NESP48681 1621 aa24.81■■□□□ 1.56
PCDH8P1-201ENST00000428983 ATP1B4Q9UN42 357 aaPredicted RBP24.81■■□□□ 1.56
PCDH8P1-201ENST00000428983 ARHGAP35Q9NRY4 1499 aa24.79■■□□□ 1.56
PCDH8P1-201ENST00000428983 CARMIL1Q5VZK9 1371 aa24.74■■□□□ 1.55
PCDH8P1-201ENST00000428983 RAD54L2Q9Y4B4 1467 aa24.74■■□□□ 1.55
PCDH8P1-201ENST00000428983 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
PCDH8P1-201ENST00000428983 PRDM2Q13029 1718 aa24.62■■□□□ 1.53
PCDH8P1-201ENST00000428983 DHX57Q6P158 1386 aaKnown RBP24.59■■□□□ 1.53
PCDH8P1-201ENST00000428983 SUPT16HQ9Y5B9 1047 aaKnown RBP24.57■■□□□ 1.52
PCDH8P1-201ENST00000428983 CCNB3Q8WWL7 1395 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms