RNA–Protein interactions for RNA: ENST00000428527.1

TTC27-202, Transcript of tetratricopeptide repeat domain 27, humanhuman

TSL 3

Gene TTC27, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC27-202ENST00000428527 AEBP2Q6ZN18 517 aaPredicted RBP32.5■■■□□ 2.79
TTC27-202ENST00000428527 CHIC1Q5VXU3 224 aa31.55■■■□□ 2.64
TTC27-202ENST00000428527 PHF23Q9BUL5 403 aaPredicted RBP27.71■■■□□ 2.03
TTC27-202ENST00000428527 SENP3Q9H4L4 574 aaPredicted RBP27.63■■■□□ 2.01
TTC27-202ENST00000428527 FOXD1Q16676 465 aa25.65■■□□□ 1.7
TTC27-202ENST00000428527 PLPPR3Q6T4P5 718 aa25.54■■□□□ 1.68
TTC27-202ENST00000428527 PPP6R1Q9UPN7 881 aa24.52■■□□□ 1.52
TTC27-202ENST00000428527 ADRA2BP18089 450 aa24.51■■□□□ 1.51
TTC27-202ENST00000428527 PIAS4Q8N2W9 510 aaPredicted RBP24.18■■□□□ 1.46
TTC27-202ENST00000428527 MSH5O43196 834 aa23.75■■□□□ 1.39
TTC27-202ENST00000428527 PPP4R3CPQ6ZMV5 832 aa22.48■■□□□ 1.19
TTC27-202ENST00000428527 SCAF1Q9H7N4 1312 aaKnown RBP22.42■■□□□ 1.18
TTC27-202ENST00000428527 MAPK8IP2Q13387 824 aaPredicted RBP22.29■■□□□ 1.16
TTC27-202ENST00000428527 DMRT2Q9Y5R5 561 aa22.01■■□□□ 1.11
TTC27-202ENST00000428527 POTEDQ86YR6 584 aa21.98■■□□□ 1.11
TTC27-202ENST00000428527 CNKSR2Q8WXI2 1034 aa21.89■■□□□ 1.09
TTC27-202ENST00000428527 NCBP3Q53F19 620 aaKnown RBP21.84■■□□□ 1.09
TTC27-202ENST00000428527 KCNA4P22459 653 aa21.74■■□□□ 1.07
TTC27-202ENST00000428527 NPM3O75607 178 aaKnown RBP21.51■■□□□ 1.03
TTC27-202ENST00000428527 RNF216Q9NWF9 866 aaPredicted RBP21.5■■□□□ 1.03
TTC27-202ENST00000428527 HOXD11P31277 338 aaPredicted RBP21.46■■□□□ 1.03
TTC27-202ENST00000428527 DCAF8L1A6NGE4 600 aa21.13■□□□□ 0.97
TTC27-202ENST00000428527 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
TTC27-202ENST00000428527 SLC4A1APQ9BWU0 796 aaKnown RBP20.68■□□□□ 0.9
TTC27-202ENST00000428527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.87
TTC27-202ENST00000428527 SLC4A2P04920 1241 aa20.35■□□□□ 0.85
TTC27-202ENST00000428527 RNF39Q9H2S5 420 aa20.32■□□□□ 0.84
TTC27-202ENST00000428527 U3KPZ7 1027 aaPredicted RBP20.13■□□□□ 0.81
TTC27-202ENST00000428527 FOXD4L1Q9NU39 408 aa20.07■□□□□ 0.8
TTC27-202ENST00000428527 C1QBPQ07021 282 aaKnown RBP20.06■□□□□ 0.8
TTC27-202ENST00000428527 ZBTB22O15209 634 aa19.99■□□□□ 0.79
TTC27-202ENST00000428527 CACNB1Q02641 598 aaPredicted RBP19.97■□□□□ 0.79
TTC27-202ENST00000428527 MYCNP04198 464 aaPredicted RBP19.9■□□□□ 0.78
TTC27-202ENST00000428527 EHMT2Q96KQ7 1210 aa19.89■□□□□ 0.77
TTC27-202ENST00000428527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.81■□□□□ 0.76
TTC27-202ENST00000428527 HNRNPUL2Q1KMD3 747 aaKnown RBP19.81■□□□□ 0.76
TTC27-202ENST00000428527 SAMD1Q6SPF0 538 aaPredicted RBP19.73■□□□□ 0.75
TTC27-202ENST00000428527 CSRNP3Q8WYN3 585 aa19.7■□□□□ 0.74
TTC27-202ENST00000428527 APLP2Q06481 763 aa19.66■□□□□ 0.74
TTC27-202ENST00000428527 SPINK5Q9NQ38 1064 aaPredicted RBP19.63■□□□□ 0.73
TTC27-202ENST00000428527 CAPN15O75808 1086 aa19.58■□□□□ 0.72
TTC27-202ENST00000428527 TRHP20396 242 aaPredicted RBP19.44■□□□□ 0.7
TTC27-202ENST00000428527 ZNF219Q9P2Y4 722 aaPredicted RBP19.42■□□□□ 0.7
TTC27-202ENST00000428527 ATF5Q9Y2D1 282 aaPredicted RBP19.37■□□□□ 0.69
TTC27-202ENST00000428527 ATXN8OSP0DMR3 200 aa19.36■□□□□ 0.69
TTC27-202ENST00000428527 DSG3P32926 999 aa19.26■□□□□ 0.67
TTC27-202ENST00000428527 ABCB7O75027 752 aa19.2■□□□□ 0.66
TTC27-202ENST00000428527 POLA2Q14181 598 aa19.05■□□□□ 0.64
TTC27-202ENST00000428527 ZBTB12Q9Y330 459 aaPredicted RBP18.74■□□□□ 0.59
TTC27-202ENST00000428527 FBLN2P98095 1184 aa18.6■□□□□ 0.57
TTC27-202ENST00000428527 MKRN4PQ13434 485 aaPredicted RBP18.51■□□□□ 0.55
TTC27-202ENST00000428527 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
TTC27-202ENST00000428527 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
TTC27-202ENST00000428527 SPDYE2BA6NHP3 402 aa18.21■□□□□ 0.51
TTC27-202ENST00000428527 SPDYE6P0CI01 402 aa18.21■□□□□ 0.51
TTC27-202ENST00000428527 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
TTC27-202ENST00000428527 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
TTC27-202ENST00000428527 AKT1S1Q96B36 256 aa18.1■□□□□ 0.49
TTC27-202ENST00000428527 SSUH2Q9Y2M2 353 aa18.04■□□□□ 0.48
TTC27-202ENST00000428527 SPDYE4A6NLX3 237 aa18.02■□□□□ 0.48
TTC27-202ENST00000428527 REM2Q8IYK8 340 aaPredicted RBP17.93■□□□□ 0.46
TTC27-202ENST00000428527 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
TTC27-202ENST00000428527 FKBP8Q14318 412 aa17.86■□□□□ 0.45
TTC27-202ENST00000428527 PITPNM1O00562 1244 aa17.74■□□□□ 0.43
TTC27-202ENST00000428527 SPDYE1Q8NFV5 336 aaPredicted RBP17.73■□□□□ 0.43
TTC27-202ENST00000428527 CHRDL2Q6WN34 429 aa17.7■□□□□ 0.42
TTC27-202ENST00000428527 CLEC11AQ9Y240 323 aa17.68■□□□□ 0.42
TTC27-202ENST00000428527 PROM2Q8N271 834 aa17.65■□□□□ 0.42
TTC27-202ENST00000428527 STAG3Q9UJ98 1225 aa17.52■□□□□ 0.4
TTC27-202ENST00000428527 PRR29P0C7W0 189 aa17.48■□□□□ 0.39
TTC27-202ENST00000428527 FXR2P51116 673 aaKnown RBP eCLIP17.43■□□□□ 0.38
TTC27-202ENST00000428527 PIP4P2Q8N4L2 257 aa17.43■□□□□ 0.38
TTC27-202ENST00000428527 POTEHQ6S545 545 aa17.37■□□□□ 0.37
TTC27-202ENST00000428527 PRKAR2AP13861 404 aaKnown RBP17.3■□□□□ 0.36
TTC27-202ENST00000428527 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
TTC27-202ENST00000428527 FBXO3Q9UK99 471 aa17.26■□□□□ 0.35
TTC27-202ENST00000428527 CREBZFQ9NS37 354 aa17.19■□□□□ 0.34
TTC27-202ENST00000428527 MIER1Q8N108 512 aa17.11■□□□□ 0.33
TTC27-202ENST00000428527 PLCD3Q8N3E9 789 aa17.08■□□□□ 0.32
TTC27-202ENST00000428527 PLEKHG5O94827 1062 aa17.06■□□□□ 0.32
TTC27-202ENST00000428527 FARP1Q9Y4F1 1045 aaPredicted RBP17.06■□□□□ 0.32
TTC27-202ENST00000428527 VASPP50552 380 aaPredicted RBP17.04■□□□□ 0.32
TTC27-202ENST00000428527 MNX1P50219 401 aaPredicted RBP16.97■□□□□ 0.31
TTC27-202ENST00000428527 HAX1O00165 279 aa16.94■□□□□ 0.3
TTC27-202ENST00000428527 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
TTC27-202ENST00000428527 ZBTB47Q9UFB7 747 aaPredicted RBP16.89■□□□□ 0.29
TTC27-202ENST00000428527 C19orf67A6NJJ6 358 aa16.84■□□□□ 0.29
TTC27-202ENST00000428527 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
TTC27-202ENST00000428527 CD44P16070 742 aaKnown RBP16.79■□□□□ 0.28
TTC27-202ENST00000428527 IFNLR1Q8IU57 520 aaPredicted RBP16.77■□□□□ 0.28
TTC27-202ENST00000428527 EVX2Q03828 476 aa16.75■□□□□ 0.27
TTC27-202ENST00000428527 PAK3O75914 559 aaPredicted RBP16.7■□□□□ 0.26
TTC27-202ENST00000428527 NUBP1P53384 320 aa16.67■□□□□ 0.26
TTC27-202ENST00000428527 RASEFQ8IZ41 740 aa16.67■□□□□ 0.26
TTC27-202ENST00000428527 ZRANB1Q9UGI0 708 aa16.67■□□□□ 0.26
TTC27-202ENST00000428527 TSPYL2Q9H2G4 693 aaPredicted RBP16.64■□□□□ 0.25
TTC27-202ENST00000428527 SPOCK2Q92563 424 aa16.63■□□□□ 0.25
TTC27-202ENST00000428527 SP7Q8TDD2 431 aaPredicted RBP16.62■□□□□ 0.25
TTC27-202ENST00000428527 FAM212AQ96EL1 285 aa16.58■□□□□ 0.24
TTC27-202ENST00000428527 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms