RNA–Protein interactions for RNA: ENST00000428399.1

AC244035.3-201, humanhuman

TSL 2 BASIC

Gene AC244035.3, Length 271 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC244035.3-201ENST00000428399 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
AC244035.3-201ENST00000428399 CHIC1Q5VXU3 224 aa16.82■□□□□ 0.28
AC244035.3-201ENST00000428399 PHF23Q9BUL5 403 aaPredicted RBP14.78□□□□□ -0.04
AC244035.3-201ENST00000428399 SENP3Q9H4L4 574 aaPredicted RBP14.77□□□□□ -0.05
AC244035.3-201ENST00000428399 FOXD1Q16676 465 aa13.73□□□□□ -0.21
AC244035.3-201ENST00000428399 PLPPR3Q6T4P5 718 aa13.61□□□□□ -0.23
AC244035.3-201ENST00000428399 ADRA2BP18089 450 aa13.11□□□□□ -0.31
AC244035.3-201ENST00000428399 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
AC244035.3-201ENST00000428399 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
AC244035.3-201ENST00000428399 MSH5O43196 834 aa12.71□□□□□ -0.37
AC244035.3-201ENST00000428399 PPP4R3CPQ6ZMV5 832 aa11.99□□□□□ -0.49
AC244035.3-201ENST00000428399 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
AC244035.3-201ENST00000428399 MAPK8IP2Q13387 824 aaPredicted RBP11.93□□□□□ -0.5
AC244035.3-201ENST00000428399 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
AC244035.3-201ENST00000428399 DMRT2Q9Y5R5 561 aa11.76□□□□□ -0.53
AC244035.3-201ENST00000428399 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
AC244035.3-201ENST00000428399 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
AC244035.3-201ENST00000428399 KCNA4P22459 653 aa11.56□□□□□ -0.56
AC244035.3-201ENST00000428399 RNF216Q9NWF9 866 aaPredicted RBP11.46□□□□□ -0.57
AC244035.3-201ENST00000428399 NPM3O75607 178 aaKnown RBP11.45□□□□□ -0.58
AC244035.3-201ENST00000428399 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
AC244035.3-201ENST00000428399 DCAF8L1A6NGE4 600 aa11.35□□□□□ -0.59
AC244035.3-201ENST00000428399 DNAJC5BQ9UF47 199 aa11.05□□□□□ -0.64
AC244035.3-201ENST00000428399 SLC4A1APQ9BWU0 796 aaKnown RBP10.99□□□□□ -0.65
AC244035.3-201ENST00000428399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.97□□□□□ -0.65
AC244035.3-201ENST00000428399 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
AC244035.3-201ENST00000428399 SLC4A2P04920 1241 aa10.84□□□□□ -0.67
AC244035.3-201ENST00000428399 CACNB1Q02641 598 aaPredicted RBP10.74□□□□□ -0.69
AC244035.3-201ENST00000428399 U3KPZ7 1027 aaPredicted RBP10.74□□□□□ -0.69
AC244035.3-201ENST00000428399 C1QBPQ07021 282 aaKnown RBP10.73□□□□□ -0.69
AC244035.3-201ENST00000428399 FOXD4L1Q9NU39 408 aa10.66□□□□□ -0.7
AC244035.3-201ENST00000428399 ZBTB22O15209 634 aa10.61□□□□□ -0.71
AC244035.3-201ENST00000428399 MYCNP04198 464 aaPredicted RBP10.59□□□□□ -0.71
AC244035.3-201ENST00000428399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.56□□□□□ -0.72
AC244035.3-201ENST00000428399 HNRNPUL2Q1KMD3 747 aaKnown RBP10.56□□□□□ -0.72
AC244035.3-201ENST00000428399 EHMT2Q96KQ7 1210 aa10.55□□□□□ -0.72
AC244035.3-201ENST00000428399 SAMD1Q6SPF0 538 aaPredicted RBP10.52□□□□□ -0.73
AC244035.3-201ENST00000428399 CAPN15O75808 1086 aa10.5□□□□□ -0.73
AC244035.3-201ENST00000428399 SPINK5Q9NQ38 1064 aaPredicted RBP10.5□□□□□ -0.73
AC244035.3-201ENST00000428399 APLP2Q06481 763 aa10.49□□□□□ -0.73
AC244035.3-201ENST00000428399 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
AC244035.3-201ENST00000428399 TRHP20396 242 aaPredicted RBP10.42□□□□□ -0.74
AC244035.3-201ENST00000428399 ZNF219Q9P2Y4 722 aaPredicted RBP10.37□□□□□ -0.75
AC244035.3-201ENST00000428399 ATF5Q9Y2D1 282 aaPredicted RBP10.32□□□□□ -0.76
AC244035.3-201ENST00000428399 DSG3P32926 999 aa10.3□□□□□ -0.76
AC244035.3-201ENST00000428399 ABCB7O75027 752 aa10.29□□□□□ -0.76
AC244035.3-201ENST00000428399 ATXN8OSP0DMR3 200 aa10.27□□□□□ -0.77
AC244035.3-201ENST00000428399 POLA2Q14181 598 aa10.19□□□□□ -0.78
AC244035.3-201ENST00000428399 ZBTB12Q9Y330 459 aaPredicted RBP9.99□□□□□ -0.81
AC244035.3-201ENST00000428399 FBLN2P98095 1184 aa9.92□□□□□ -0.82
AC244035.3-201ENST00000428399 MKRN4PQ13434 485 aaPredicted RBP9.85□□□□□ -0.83
AC244035.3-201ENST00000428399 OSCARQ8IYS5 282 aa9.85□□□□□ -0.83
AC244035.3-201ENST00000428399 RBM42Q9BTD8 480 aaKnown RBP9.83□□□□□ -0.84
AC244035.3-201ENST00000428399 SPDYE2BA6NHP3 402 aa9.7□□□□□ -0.86
AC244035.3-201ENST00000428399 SPDYE6P0CI01 402 aa9.7□□□□□ -0.86
AC244035.3-201ENST00000428399 SPDYE2Q495Y8 402 aa9.7□□□□□ -0.86
AC244035.3-201ENST00000428399 ZNF692Q9BU19 519 aaPredicted RBP9.68□□□□□ -0.86
AC244035.3-201ENST00000428399 AKT1S1Q96B36 256 aa9.67□□□□□ -0.86
AC244035.3-201ENST00000428399 SSUH2Q9Y2M2 353 aa9.6□□□□□ -0.87
AC244035.3-201ENST00000428399 SPDYE4A6NLX3 237 aa9.59□□□□□ -0.87
AC244035.3-201ENST00000428399 REM2Q8IYK8 340 aaPredicted RBP9.59□□□□□ -0.87
AC244035.3-201ENST00000428399 PABPN1Q86U42 306 aaKnown RBP eCLIP9.54□□□□□ -0.88
AC244035.3-201ENST00000428399 PITPNM1O00562 1244 aa9.49□□□□□ -0.89
AC244035.3-201ENST00000428399 CHRDL2Q6WN34 429 aa9.49□□□□□ -0.89
AC244035.3-201ENST00000428399 FKBP8Q14318 412 aa9.48□□□□□ -0.89
AC244035.3-201ENST00000428399 CLEC11AQ9Y240 323 aa9.48□□□□□ -0.89
AC244035.3-201ENST00000428399 SPDYE1Q8NFV5 336 aaPredicted RBP9.47□□□□□ -0.89
AC244035.3-201ENST00000428399 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
AC244035.3-201ENST00000428399 POTEHQ6S545 545 aa9.35□□□□□ -0.91
AC244035.3-201ENST00000428399 PROM2Q8N271 834 aa9.34□□□□□ -0.91
AC244035.3-201ENST00000428399 PIP4P2Q8N4L2 257 aa9.34□□□□□ -0.91
AC244035.3-201ENST00000428399 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
AC244035.3-201ENST00000428399 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
AC244035.3-201ENST00000428399 PRKAR2AP13861 404 aaKnown RBP9.26□□□□□ -0.93
AC244035.3-201ENST00000428399 CHADLQ6NUI6 762 aa9.24□□□□□ -0.93
AC244035.3-201ENST00000428399 CREBZFQ9NS37 354 aa9.17□□□□□ -0.94
AC244035.3-201ENST00000428399 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
AC244035.3-201ENST00000428399 MIER1Q8N108 512 aa9.13□□□□□ -0.95
AC244035.3-201ENST00000428399 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
AC244035.3-201ENST00000428399 HAX1O00165 279 aa9.11□□□□□ -0.95
AC244035.3-201ENST00000428399 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
AC244035.3-201ENST00000428399 PLEKHG5O94827 1062 aa9.1□□□□□ -0.95
AC244035.3-201ENST00000428399 VASPP50552 380 aaPredicted RBP9.04□□□□□ -0.96
AC244035.3-201ENST00000428399 NPM1P06748 294 aaKnown RBP eCLIP9.03□□□□□ -0.96
AC244035.3-201ENST00000428399 MNX1P50219 401 aaPredicted RBP9.03□□□□□ -0.96
AC244035.3-201ENST00000428399 C19orf67A6NJJ6 358 aa9□□□□□ -0.97
AC244035.3-201ENST00000428399 CD44P16070 742 aaKnown RBP8.99□□□□□ -0.97
AC244035.3-201ENST00000428399 EVX2Q03828 476 aa8.99□□□□□ -0.97
AC244035.3-201ENST00000428399 ZBTB47Q9UFB7 747 aaPredicted RBP8.98□□□□□ -0.97
AC244035.3-201ENST00000428399 KLHL34Q8N239 644 aa8.97□□□□□ -0.97
AC244035.3-201ENST00000428399 PAK3O75914 559 aaPredicted RBP8.93□□□□□ -0.98
AC244035.3-201ENST00000428399 ZRANB1Q9UGI0 708 aa8.93□□□□□ -0.98
AC244035.3-201ENST00000428399 SP7Q8TDD2 431 aaPredicted RBP8.92□□□□□ -0.98
AC244035.3-201ENST00000428399 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
AC244035.3-201ENST00000428399 IFNLR1Q8IU57 520 aaPredicted RBP8.9□□□□□ -0.98
AC244035.3-201ENST00000428399 RASEFQ8IZ41 740 aa8.88□□□□□ -0.99
AC244035.3-201ENST00000428399 NUBP1P53384 320 aa8.87□□□□□ -0.99
AC244035.3-201ENST00000428399 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
AC244035.3-201ENST00000428399 SPOCK2Q92563 424 aa8.83□□□□□ -1
AC244035.3-201ENST00000428399 FAM212AQ96EL1 285 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms