RNA–Protein interactions for RNA: ENST00000428399.1

AC244035.3-201, humanhuman

TSL 2 BASIC

Gene AC244035.3, Length 271 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC244035.3-201ENST00000428399 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
AC244035.3-201ENST00000428399 CHIC1Q5VXU3 224 aa16.82■□□□□ 0.28
AC244035.3-201ENST00000428399 PHF23Q9BUL5 403 aaPredicted RBP14.78□□□□□ -0.04
AC244035.3-201ENST00000428399 SENP3Q9H4L4 574 aaPredicted RBP14.77□□□□□ -0.05
AC244035.3-201ENST00000428399 FOXD1Q16676 465 aa13.73□□□□□ -0.21
AC244035.3-201ENST00000428399 PLPPR3Q6T4P5 718 aa13.61□□□□□ -0.23
AC244035.3-201ENST00000428399 ADRA2BP18089 450 aa13.11□□□□□ -0.31
AC244035.3-201ENST00000428399 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
AC244035.3-201ENST00000428399 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
AC244035.3-201ENST00000428399 MSH5O43196 834 aa12.71□□□□□ -0.37
AC244035.3-201ENST00000428399 PPP4R3CPQ6ZMV5 832 aa11.99□□□□□ -0.49
AC244035.3-201ENST00000428399 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
AC244035.3-201ENST00000428399 MAPK8IP2Q13387 824 aaPredicted RBP11.93□□□□□ -0.5
AC244035.3-201ENST00000428399 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
AC244035.3-201ENST00000428399 DMRT2Q9Y5R5 561 aa11.76□□□□□ -0.53
AC244035.3-201ENST00000428399 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
AC244035.3-201ENST00000428399 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
AC244035.3-201ENST00000428399 KCNA4P22459 653 aa11.56□□□□□ -0.56
AC244035.3-201ENST00000428399 RNF216Q9NWF9 866 aaPredicted RBP11.46□□□□□ -0.57
AC244035.3-201ENST00000428399 NPM3O75607 178 aaKnown RBP11.45□□□□□ -0.58
AC244035.3-201ENST00000428399 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
AC244035.3-201ENST00000428399 DCAF8L1A6NGE4 600 aa11.35□□□□□ -0.59
AC244035.3-201ENST00000428399 DNAJC5BQ9UF47 199 aa11.05□□□□□ -0.64
AC244035.3-201ENST00000428399 SLC4A1APQ9BWU0 796 aaKnown RBP10.99□□□□□ -0.65
AC244035.3-201ENST00000428399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.97□□□□□ -0.65
AC244035.3-201ENST00000428399 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
AC244035.3-201ENST00000428399 SLC4A2P04920 1241 aa10.84□□□□□ -0.67
AC244035.3-201ENST00000428399 CACNB1Q02641 598 aaPredicted RBP10.74□□□□□ -0.69
AC244035.3-201ENST00000428399 U3KPZ7 1027 aaPredicted RBP10.74□□□□□ -0.69
AC244035.3-201ENST00000428399 C1QBPQ07021 282 aaKnown RBP10.73□□□□□ -0.69
AC244035.3-201ENST00000428399 FOXD4L1Q9NU39 408 aa10.66□□□□□ -0.7
AC244035.3-201ENST00000428399 ZBTB22O15209 634 aa10.61□□□□□ -0.71
AC244035.3-201ENST00000428399 MYCNP04198 464 aaPredicted RBP10.59□□□□□ -0.71
AC244035.3-201ENST00000428399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.56□□□□□ -0.72
AC244035.3-201ENST00000428399 HNRNPUL2Q1KMD3 747 aaKnown RBP10.56□□□□□ -0.72
AC244035.3-201ENST00000428399 EHMT2Q96KQ7 1210 aa10.55□□□□□ -0.72
AC244035.3-201ENST00000428399 SAMD1Q6SPF0 538 aaPredicted RBP10.52□□□□□ -0.73
AC244035.3-201ENST00000428399 CAPN15O75808 1086 aa10.5□□□□□ -0.73
AC244035.3-201ENST00000428399 SPINK5Q9NQ38 1064 aaPredicted RBP10.5□□□□□ -0.73
AC244035.3-201ENST00000428399 APLP2Q06481 763 aa10.49□□□□□ -0.73
AC244035.3-201ENST00000428399 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
AC244035.3-201ENST00000428399 TRHP20396 242 aaPredicted RBP10.42□□□□□ -0.74
AC244035.3-201ENST00000428399 ZNF219Q9P2Y4 722 aaPredicted RBP10.37□□□□□ -0.75
AC244035.3-201ENST00000428399 ATF5Q9Y2D1 282 aaPredicted RBP10.32□□□□□ -0.76
AC244035.3-201ENST00000428399 DSG3P32926 999 aa10.3□□□□□ -0.76
AC244035.3-201ENST00000428399 ABCB7O75027 752 aa10.29□□□□□ -0.76
AC244035.3-201ENST00000428399 ATXN8OSP0DMR3 200 aa10.27□□□□□ -0.77
AC244035.3-201ENST00000428399 POLA2Q14181 598 aa10.19□□□□□ -0.78
AC244035.3-201ENST00000428399 ZBTB12Q9Y330 459 aaPredicted RBP9.99□□□□□ -0.81
AC244035.3-201ENST00000428399 FBLN2P98095 1184 aa9.92□□□□□ -0.82
AC244035.3-201ENST00000428399 MKRN4PQ13434 485 aaPredicted RBP9.85□□□□□ -0.83
AC244035.3-201ENST00000428399 OSCARQ8IYS5 282 aa9.85□□□□□ -0.83
AC244035.3-201ENST00000428399 RBM42Q9BTD8 480 aaKnown RBP9.83□□□□□ -0.84
AC244035.3-201ENST00000428399 SPDYE2BA6NHP3 402 aa9.7□□□□□ -0.86
AC244035.3-201ENST00000428399 SPDYE6P0CI01 402 aa9.7□□□□□ -0.86
AC244035.3-201ENST00000428399 SPDYE2Q495Y8 402 aa9.7□□□□□ -0.86
AC244035.3-201ENST00000428399 ZNF692Q9BU19 519 aaPredicted RBP9.68□□□□□ -0.86
AC244035.3-201ENST00000428399 AKT1S1Q96B36 256 aa9.67□□□□□ -0.86
AC244035.3-201ENST00000428399 SSUH2Q9Y2M2 353 aa9.6□□□□□ -0.87
AC244035.3-201ENST00000428399 SPDYE4A6NLX3 237 aa9.59□□□□□ -0.87
AC244035.3-201ENST00000428399 REM2Q8IYK8 340 aaPredicted RBP9.59□□□□□ -0.87
AC244035.3-201ENST00000428399 PABPN1Q86U42 306 aaKnown RBP eCLIP9.54□□□□□ -0.88
AC244035.3-201ENST00000428399 PITPNM1O00562 1244 aa9.49□□□□□ -0.89
AC244035.3-201ENST00000428399 CHRDL2Q6WN34 429 aa9.49□□□□□ -0.89
AC244035.3-201ENST00000428399 FKBP8Q14318 412 aa9.48□□□□□ -0.89
AC244035.3-201ENST00000428399 CLEC11AQ9Y240 323 aa9.48□□□□□ -0.89
AC244035.3-201ENST00000428399 SPDYE1Q8NFV5 336 aaPredicted RBP9.47□□□□□ -0.89
AC244035.3-201ENST00000428399 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
AC244035.3-201ENST00000428399 POTEHQ6S545 545 aa9.35□□□□□ -0.91
AC244035.3-201ENST00000428399 PROM2Q8N271 834 aa9.34□□□□□ -0.91
AC244035.3-201ENST00000428399 PIP4P2Q8N4L2 257 aa9.34□□□□□ -0.91
AC244035.3-201ENST00000428399 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
AC244035.3-201ENST00000428399 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
AC244035.3-201ENST00000428399 PRKAR2AP13861 404 aaKnown RBP9.26□□□□□ -0.93
AC244035.3-201ENST00000428399 CHADLQ6NUI6 762 aa9.24□□□□□ -0.93
AC244035.3-201ENST00000428399 CREBZFQ9NS37 354 aa9.17□□□□□ -0.94
AC244035.3-201ENST00000428399 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
AC244035.3-201ENST00000428399 MIER1Q8N108 512 aa9.13□□□□□ -0.95
AC244035.3-201ENST00000428399 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
AC244035.3-201ENST00000428399 HAX1O00165 279 aa9.11□□□□□ -0.95
AC244035.3-201ENST00000428399 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
AC244035.3-201ENST00000428399 PLEKHG5O94827 1062 aa9.1□□□□□ -0.95
AC244035.3-201ENST00000428399 VASPP50552 380 aaPredicted RBP9.04□□□□□ -0.96
AC244035.3-201ENST00000428399 NPM1P06748 294 aaKnown RBP eCLIP9.03□□□□□ -0.96
AC244035.3-201ENST00000428399 MNX1P50219 401 aaPredicted RBP9.03□□□□□ -0.96
AC244035.3-201ENST00000428399 C19orf67A6NJJ6 358 aa9□□□□□ -0.97
AC244035.3-201ENST00000428399 CD44P16070 742 aaKnown RBP8.99□□□□□ -0.97
AC244035.3-201ENST00000428399 EVX2Q03828 476 aa8.99□□□□□ -0.97
AC244035.3-201ENST00000428399 ZBTB47Q9UFB7 747 aaPredicted RBP8.98□□□□□ -0.97
AC244035.3-201ENST00000428399 KLHL34Q8N239 644 aa8.97□□□□□ -0.97
AC244035.3-201ENST00000428399 PAK3O75914 559 aaPredicted RBP8.93□□□□□ -0.98
AC244035.3-201ENST00000428399 ZRANB1Q9UGI0 708 aa8.93□□□□□ -0.98
AC244035.3-201ENST00000428399 SP7Q8TDD2 431 aaPredicted RBP8.92□□□□□ -0.98
AC244035.3-201ENST00000428399 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
AC244035.3-201ENST00000428399 IFNLR1Q8IU57 520 aaPredicted RBP8.9□□□□□ -0.98
AC244035.3-201ENST00000428399 RASEFQ8IZ41 740 aa8.88□□□□□ -0.99
AC244035.3-201ENST00000428399 NUBP1P53384 320 aa8.87□□□□□ -0.99
AC244035.3-201ENST00000428399 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
AC244035.3-201ENST00000428399 SPOCK2Q92563 424 aa8.83□□□□□ -1
AC244035.3-201ENST00000428399 FAM212AQ96EL1 285 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms