RNA–Protein interactions for RNA: ENST00000428364.2

AL392088.1-201, humanhuman

BASIC

Gene AL392088.1, Length 670 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL392088.1-201ENST00000428364 AEBP2Q6ZN18 517 aaPredicted RBP35.19■■■■□ 3.22
AL392088.1-201ENST00000428364 CHIC1Q5VXU3 224 aa34.61■■■■□ 3.13
AL392088.1-201ENST00000428364 PHF23Q9BUL5 403 aaPredicted RBP30.49■■■□□ 2.47
AL392088.1-201ENST00000428364 SENP3Q9H4L4 574 aaPredicted RBP29.8■■■□□ 2.36
AL392088.1-201ENST00000428364 PLPPR3Q6T4P5 718 aa28.21■■■□□ 2.11
AL392088.1-201ENST00000428364 FOXD1Q16676 465 aa27.64■■■□□ 2.02
AL392088.1-201ENST00000428364 PPP6R1Q9UPN7 881 aa26.82■■□□□ 1.88
AL392088.1-201ENST00000428364 ADRA2BP18089 450 aa26.79■■□□□ 1.88
AL392088.1-201ENST00000428364 PIAS4Q8N2W9 510 aaPredicted RBP26.08■■□□□ 1.77
AL392088.1-201ENST00000428364 MSH5O43196 834 aa25.37■■□□□ 1.65
AL392088.1-201ENST00000428364 PPP4R3CPQ6ZMV5 832 aa24.89■■□□□ 1.58
AL392088.1-201ENST00000428364 KCNA4P22459 653 aa24.58■■□□□ 1.53
AL392088.1-201ENST00000428364 SCAF1Q9H7N4 1312 aaKnown RBP24.52■■□□□ 1.52
AL392088.1-201ENST00000428364 NCBP3Q53F19 620 aaKnown RBP24.3■■□□□ 1.48
AL392088.1-201ENST00000428364 MAPK8IP2Q13387 824 aaPredicted RBP24.24■■□□□ 1.47
AL392088.1-201ENST00000428364 CNKSR2Q8WXI2 1034 aa24.15■■□□□ 1.46
AL392088.1-201ENST00000428364 NPM3O75607 178 aaKnown RBP23.95■■□□□ 1.42
AL392088.1-201ENST00000428364 DMRT2Q9Y5R5 561 aa23.84■■□□□ 1.41
AL392088.1-201ENST00000428364 RNF216Q9NWF9 866 aaPredicted RBP23.62■■□□□ 1.37
AL392088.1-201ENST00000428364 HOXD11P31277 338 aaPredicted RBP23.47■■□□□ 1.35
AL392088.1-201ENST00000428364 SLC4A1APQ9BWU0 796 aaKnown RBP23.45■■□□□ 1.34
AL392088.1-201ENST00000428364 DNAJC5BQ9UF47 199 aa23.3■■□□□ 1.32
AL392088.1-201ENST00000428364 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
AL392088.1-201ENST00000428364 EHMT2Q96KQ7 1210 aa23.01■■□□□ 1.27
AL392088.1-201ENST00000428364 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
AL392088.1-201ENST00000428364 DCAF8L1A6NGE4 600 aa22.72■■□□□ 1.23
AL392088.1-201ENST00000428364 POTEDQ86YR6 584 aa22.67■■□□□ 1.22
AL392088.1-201ENST00000428364 ZBTB22O15209 634 aa22.63■■□□□ 1.21
AL392088.1-201ENST00000428364 SLC4A2P04920 1241 aa22.58■■□□□ 1.21
AL392088.1-201ENST00000428364 FOXD4L1Q9NU39 408 aa22.55■■□□□ 1.2
AL392088.1-201ENST00000428364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.31■■□□□ 1.16
AL392088.1-201ENST00000428364 MYCNP04198 464 aaPredicted RBP22.11■■□□□ 1.13
AL392088.1-201ENST00000428364 U3KPZ7 1027 aaPredicted RBP22■■□□□ 1.11
AL392088.1-201ENST00000428364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.81■■□□□ 1.08
AL392088.1-201ENST00000428364 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
AL392088.1-201ENST00000428364 ATXN8OSP0DMR3 200 aa21.79■■□□□ 1.08
AL392088.1-201ENST00000428364 RNF39Q9H2S5 420 aa21.79■■□□□ 1.08
AL392088.1-201ENST00000428364 SAMD1Q6SPF0 538 aaPredicted RBP21.73■■□□□ 1.07
AL392088.1-201ENST00000428364 C1QBPQ07021 282 aaKnown RBP21.55■■□□□ 1.04
AL392088.1-201ENST00000428364 ATF5Q9Y2D1 282 aaPredicted RBP21.52■■□□□ 1.04
AL392088.1-201ENST00000428364 APLP2Q06481 763 aa21.51■■□□□ 1.03
AL392088.1-201ENST00000428364 SPINK5Q9NQ38 1064 aaPredicted RBP21.31■■□□□ 1
AL392088.1-201ENST00000428364 CAPN15O75808 1086 aa21.18■□□□□ 0.98
AL392088.1-201ENST00000428364 ZNF219Q9P2Y4 722 aaPredicted RBP21.17■□□□□ 0.98
AL392088.1-201ENST00000428364 TRHP20396 242 aaPredicted RBP21.15■□□□□ 0.98
AL392088.1-201ENST00000428364 CACNB1Q02641 598 aaPredicted RBP21.01■□□□□ 0.95
AL392088.1-201ENST00000428364 POLA2Q14181 598 aa20.9■□□□□ 0.94
AL392088.1-201ENST00000428364 DSG3P32926 999 aa20.82■□□□□ 0.92
AL392088.1-201ENST00000428364 ABCB7O75027 752 aa20.79■□□□□ 0.92
AL392088.1-201ENST00000428364 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
AL392088.1-201ENST00000428364 ABCC9O60706 1549 aa20.64■□□□□ 0.9
AL392088.1-201ENST00000428364 MKRN4PQ13434 485 aaPredicted RBP20.6■□□□□ 0.89
AL392088.1-201ENST00000428364 FBLN2P98095 1184 aa20.57■□□□□ 0.88
AL392088.1-201ENST00000428364 ZBTB12Q9Y330 459 aaPredicted RBP20.55■□□□□ 0.88
AL392088.1-201ENST00000428364 FKBP8Q14318 412 aa20.48■□□□□ 0.87
AL392088.1-201ENST00000428364 SPDYE4A6NLX3 237 aa20.24■□□□□ 0.83
AL392088.1-201ENST00000428364 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
AL392088.1-201ENST00000428364 SPDYE2BA6NHP3 402 aa20.03■□□□□ 0.8
AL392088.1-201ENST00000428364 SPDYE6P0CI01 402 aa20.03■□□□□ 0.8
AL392088.1-201ENST00000428364 SPDYE2Q495Y8 402 aa20.03■□□□□ 0.8
AL392088.1-201ENST00000428364 PROM2Q8N271 834 aa19.99■□□□□ 0.79
AL392088.1-201ENST00000428364 ZNF692Q9BU19 519 aaPredicted RBP19.99■□□□□ 0.79
AL392088.1-201ENST00000428364 SSUH2Q9Y2M2 353 aa19.91■□□□□ 0.78
AL392088.1-201ENST00000428364 RBM42Q9BTD8 480 aaKnown RBP19.81■□□□□ 0.76
AL392088.1-201ENST00000428364 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
AL392088.1-201ENST00000428364 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
AL392088.1-201ENST00000428364 FBXO3Q9UK99 471 aa19.71■□□□□ 0.75
AL392088.1-201ENST00000428364 AKT1S1Q96B36 256 aa19.64■□□□□ 0.73
AL392088.1-201ENST00000428364 NACADO15069 1562 aa19.63■□□□□ 0.73
AL392088.1-201ENST00000428364 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
AL392088.1-201ENST00000428364 STAG3Q9UJ98 1225 aa19.48■□□□□ 0.71
AL392088.1-201ENST00000428364 REM2Q8IYK8 340 aaPredicted RBP19.45■□□□□ 0.7
AL392088.1-201ENST00000428364 VASPP50552 380 aaPredicted RBP19.41■□□□□ 0.7
AL392088.1-201ENST00000428364 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
AL392088.1-201ENST00000428364 SPDYE1Q8NFV5 336 aaPredicted RBP19.37■□□□□ 0.69
AL392088.1-201ENST00000428364 CLEC11AQ9Y240 323 aa19.25■□□□□ 0.67
AL392088.1-201ENST00000428364 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
AL392088.1-201ENST00000428364 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
AL392088.1-201ENST00000428364 IFNLR1Q8IU57 520 aaPredicted RBP19.21■□□□□ 0.67
AL392088.1-201ENST00000428364 PITPNM1O00562 1244 aa19.19■□□□□ 0.66
AL392088.1-201ENST00000428364 DCAF1Q9Y4B6 1507 aa19.18■□□□□ 0.66
AL392088.1-201ENST00000428364 MIER1Q8N108 512 aa19.17■□□□□ 0.66
AL392088.1-201ENST00000428364 PRR29P0C7W0 189 aa19.14■□□□□ 0.65
AL392088.1-201ENST00000428364 PLCD3Q8N3E9 789 aa19.14■□□□□ 0.65
AL392088.1-201ENST00000428364 AMER1Q5JTC6 1135 aaPredicted RBP19.11■□□□□ 0.65
AL392088.1-201ENST00000428364 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
AL392088.1-201ENST00000428364 RTN4Q9NQC3 1192 aaKnown RBP19.06■□□□□ 0.64
AL392088.1-201ENST00000428364 PLEKHG5O94827 1062 aa19.02■□□□□ 0.64
AL392088.1-201ENST00000428364 KLHL34Q8N239 644 aa19.02■□□□□ 0.64
AL392088.1-201ENST00000428364 CREBZFQ9NS37 354 aa18.97■□□□□ 0.63
AL392088.1-201ENST00000428364 SHROOM4Q9ULL8 1493 aa18.95■□□□□ 0.62
AL392088.1-201ENST00000428364 ZBTB47Q9UFB7 747 aaPredicted RBP18.93■□□□□ 0.62
AL392088.1-201ENST00000428364 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
AL392088.1-201ENST00000428364 SPOCK2Q92563 424 aa18.92■□□□□ 0.62
AL392088.1-201ENST00000428364 CHRDL2Q6WN34 429 aa18.88■□□□□ 0.61
AL392088.1-201ENST00000428364 MNX1P50219 401 aaPredicted RBP18.83■□□□□ 0.6
AL392088.1-201ENST00000428364 FXR2P51116 673 aaKnown RBP eCLIP18.83■□□□□ 0.6
AL392088.1-201ENST00000428364 CHADLQ6NUI6 762 aa18.76■□□□□ 0.59
AL392088.1-201ENST00000428364 PRKAR2AP13861 404 aaKnown RBP18.72■□□□□ 0.59
AL392088.1-201ENST00000428364 PIP4P2Q8N4L2 257 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms