RNA–Protein interactions for RNA: ENST00000428289.1

AC243772.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC243772.2, Length 3,543 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243772.2-201ENST00000428289 NISCHQ9Y2I1 1504 aa23.8■■□□□ 1.4
AC243772.2-201ENST00000428289 DCAF8L2P0C7V8 631 aa22■■□□□ 1.11
AC243772.2-201ENST00000428289 SHROOM4Q9ULL8 1493 aa21.75■■□□□ 1.07
AC243772.2-201ENST00000428289 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
AC243772.2-201ENST00000428289 EHMT2Q96KQ7 1210 aa20.41■□□□□ 0.86
AC243772.2-201ENST00000428289 FAM9AQ8IZU1 332 aaPredicted RBP20.03■□□□□ 0.8
AC243772.2-201ENST00000428289 ABCC9O60706 1549 aa19.92■□□□□ 0.78
AC243772.2-201ENST00000428289 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
AC243772.2-201ENST00000428289 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
AC243772.2-201ENST00000428289 LOC105371045A0A1W2PR82 267 aa19.81■□□□□ 0.76
AC243772.2-201ENST00000428289 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
AC243772.2-201ENST00000428289 CCDC180Q9P1Z9 1646 aa19.63■□□□□ 0.73
AC243772.2-201ENST00000428289 TTBK1Q5TCY1 1321 aaPredicted RBP19.58■□□□□ 0.73
AC243772.2-201ENST00000428289 TRIM41Q8WV44 630 aa19.58■□□□□ 0.72
AC243772.2-201ENST00000428289 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.72
AC243772.2-201ENST00000428289 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.71
AC243772.2-201ENST00000428289 SCRIBQ14160 1630 aa19.46■□□□□ 0.71
AC243772.2-201ENST00000428289 MYO15BQ96JP2 1530 aa19.39■□□□□ 0.7
AC243772.2-201ENST00000428289 RANGAP1P46060 587 aaPredicted RBP19.31■□□□□ 0.68
AC243772.2-201ENST00000428289 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
AC243772.2-201ENST00000428289 CECR2Q9BXF3 1484 aa19.02■□□□□ 0.64
AC243772.2-201ENST00000428289 UBTFP17480 764 aaKnown RBP18.97■□□□□ 0.63
AC243772.2-201ENST00000428289 HRCP23327 699 aa18.92■□□□□ 0.62
AC243772.2-201ENST00000428289 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
AC243772.2-201ENST00000428289 TRIM26Q12899 539 aaPredicted RBP18.82■□□□□ 0.6
AC243772.2-201ENST00000428289 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
AC243772.2-201ENST00000428289 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
AC243772.2-201ENST00000428289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
AC243772.2-201ENST00000428289 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
AC243772.2-201ENST00000428289 NACADO15069 1562 aa18.62■□□□□ 0.57
AC243772.2-201ENST00000428289 APLP2Q06481 763 aa18.55■□□□□ 0.56
AC243772.2-201ENST00000428289 WIZO95785 1651 aa18.54■□□□□ 0.56
AC243772.2-201ENST00000428289 ATP1B4Q9UN42 357 aaPredicted RBP18.53■□□□□ 0.56
AC243772.2-201ENST00000428289 HNRNPUL2Q1KMD3 747 aaKnown RBP18.51■□□□□ 0.55
AC243772.2-201ENST00000428289 ITGAEP38570 1179 aa18.41■□□□□ 0.54
AC243772.2-201ENST00000428289 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
AC243772.2-201ENST00000428289 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
AC243772.2-201ENST00000428289 SOGA1O94964 1423 aa18.32■□□□□ 0.52
AC243772.2-201ENST00000428289 CCDC88BA6NC98 1476 aa18.3■□□□□ 0.52
AC243772.2-201ENST00000428289 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
AC243772.2-201ENST00000428289 P3H3Q8IVL6 736 aa18.22■□□□□ 0.51
AC243772.2-201ENST00000428289 ZEB1P37275 1124 aaPredicted RBP18.2■□□□□ 0.5
AC243772.2-201ENST00000428289 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
AC243772.2-201ENST00000428289 YTHDC1Q96MU7 727 aaKnown RBP18.16■□□□□ 0.5
AC243772.2-201ENST00000428289 BAZ1BQ9UIG0 1483 aaKnown RBP18.1■□□□□ 0.49
AC243772.2-201ENST00000428289 WRNQ14191 1432 aaPredicted RBP eCLIP18.1■□□□□ 0.49
AC243772.2-201ENST00000428289 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
AC243772.2-201ENST00000428289 SMARCA4P51532 1647 aa18.07■□□□□ 0.48
AC243772.2-201ENST00000428289 ARID3CA6NKF2 412 aa18.03■□□□□ 0.48
AC243772.2-201ENST00000428289 TOP2AP11388 1531 aaKnown RBP17.99■□□□□ 0.47
AC243772.2-201ENST00000428289 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
AC243772.2-201ENST00000428289 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
AC243772.2-201ENST00000428289 FAM50AQ14320 339 aaKnown RBP17.9■□□□□ 0.46
AC243772.2-201ENST00000428289 CLIP1P30622 1438 aa17.89■□□□□ 0.45
AC243772.2-201ENST00000428289 DIEXFQ68CQ4 756 aaKnown RBP17.88■□□□□ 0.45
AC243772.2-201ENST00000428289 BICRAQ9NZM4 1560 aa17.83■□□□□ 0.45
AC243772.2-201ENST00000428289 TNIKQ9UKE5 1360 aa17.83■□□□□ 0.44
AC243772.2-201ENST00000428289 GOLGA3Q08378 1498 aa17.81■□□□□ 0.44
AC243772.2-201ENST00000428289 UNC13AQ9UPW8 1703 aa17.79■□□□□ 0.44
AC243772.2-201ENST00000428289 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
AC243772.2-201ENST00000428289 NEUROD1Q13562 356 aa17.77■□□□□ 0.44
AC243772.2-201ENST00000428289 KANK4Q5T7N3 995 aaPredicted RBP17.76■□□□□ 0.43
AC243772.2-201ENST00000428289 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
AC243772.2-201ENST00000428289 FBLN2P98095 1184 aa17.75■□□□□ 0.43
AC243772.2-201ENST00000428289 CEP164Q9UPV0 1460 aa17.67■□□□□ 0.42
AC243772.2-201ENST00000428289 CNGB1Q14028 1251 aaPredicted RBP17.66■□□□□ 0.42
AC243772.2-201ENST00000428289 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
AC243772.2-201ENST00000428289 EEA1Q15075 1411 aa17.65■□□□□ 0.42
AC243772.2-201ENST00000428289 CUX2O14529 1486 aa17.62■□□□□ 0.41
AC243772.2-201ENST00000428289 HIRIP3Q9BW71 556 aaPredicted RBP17.61■□□□□ 0.41
AC243772.2-201ENST00000428289 ZNF316A6NFI3 1004 aaPredicted RBP17.59■□□□□ 0.41
AC243772.2-201ENST00000428289 CENPBP07199 599 aaPredicted RBP17.59■□□□□ 0.41
AC243772.2-201ENST00000428289 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
AC243772.2-201ENST00000428289 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
AC243772.2-201ENST00000428289 CHIC2Q9UKJ5 165 aa17.53■□□□□ 0.4
AC243772.2-201ENST00000428289 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
AC243772.2-201ENST00000428289 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
AC243772.2-201ENST00000428289 VPS8Q8N3P4 1428 aa17.49■□□□□ 0.39
AC243772.2-201ENST00000428289 MIER1Q8N108 512 aa17.49■□□□□ 0.39
AC243772.2-201ENST00000428289 CARMIL1Q5VZK9 1371 aa17.48■□□□□ 0.39
AC243772.2-201ENST00000428289 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
AC243772.2-201ENST00000428289 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
AC243772.2-201ENST00000428289 TRIM52Q96A61 297 aa17.46■□□□□ 0.39
AC243772.2-201ENST00000428289 NESP48681 1621 aa17.46■□□□□ 0.39
AC243772.2-201ENST00000428289 POLR3GLQ9BT43 218 aa17.43■□□□□ 0.38
AC243772.2-201ENST00000428289 SIN3AQ96ST3 1273 aa17.43■□□□□ 0.38
AC243772.2-201ENST00000428289 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
AC243772.2-201ENST00000428289 NCAPD3P42695 1498 aa17.41■□□□□ 0.38
AC243772.2-201ENST00000428289 ZNF777Q9ULD5 760 aaPredicted RBP17.39■□□□□ 0.38
AC243772.2-201ENST00000428289 RRP7BPQ9NSQ0 103 aa17.36■□□□□ 0.37
AC243772.2-201ENST00000428289 ACIN1Q9UKV3 1341 aaKnown RBP17.35■□□□□ 0.37
AC243772.2-201ENST00000428289 CUX1P39880 1505 aa17.35■□□□□ 0.37
AC243772.2-201ENST00000428289 IGF1RP08069 1367 aa17.35■□□□□ 0.37
AC243772.2-201ENST00000428289 FHOD3Q2V2M9 1422 aa17.33■□□□□ 0.36
AC243772.2-201ENST00000428289 FGD5Q6ZNL6 1462 aa17.32■□□□□ 0.36
AC243772.2-201ENST00000428289 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
AC243772.2-201ENST00000428289 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
AC243772.2-201ENST00000428289 DDX10Q13206 875 aaKnown RBP17.3■□□□□ 0.36
AC243772.2-201ENST00000428289 MTUS2Q5JR59 1369 aa17.3■□□□□ 0.36
AC243772.2-201ENST00000428289 ARAP1Q96P48 1450 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms