RNA–Protein interactions for RNA: ENST00000427271.1

TTF2-202, Transcript of transcription termination factor 2, humanhuman

TSL 3

Gene TTF2, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTF2-202ENST00000427271 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
TTF2-202ENST00000427271 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
TTF2-202ENST00000427271 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
TTF2-202ENST00000427271 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
TTF2-202ENST00000427271 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
TTF2-202ENST00000427271 FOXD1Q16676 465 aa14.79□□□□□ -0.04
TTF2-202ENST00000427271 ADRA2BP18089 450 aa14.66□□□□□ -0.06
TTF2-202ENST00000427271 PPP6R1Q9UPN7 881 aa14.64□□□□□ -0.07
TTF2-202ENST00000427271 KCNA4P22459 653 aa14.14□□□□□ -0.15
TTF2-202ENST00000427271 PIAS4Q8N2W9 510 aaPredicted RBP14.06□□□□□ -0.16
TTF2-202ENST00000427271 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
TTF2-202ENST00000427271 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
TTF2-202ENST00000427271 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
TTF2-202ENST00000427271 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
TTF2-202ENST00000427271 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
TTF2-202ENST00000427271 MSH5O43196 834 aa13.43□□□□□ -0.26
TTF2-202ENST00000427271 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
TTF2-202ENST00000427271 CNKSR2Q8WXI2 1034 aa13.38□□□□□ -0.27
TTF2-202ENST00000427271 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
TTF2-202ENST00000427271 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
TTF2-202ENST00000427271 NISCHQ9Y2I1 1504 aa13.11□□□□□ -0.31
TTF2-202ENST00000427271 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
TTF2-202ENST00000427271 ZBTB22O15209 634 aa13.04□□□□□ -0.32
TTF2-202ENST00000427271 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
TTF2-202ENST00000427271 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
TTF2-202ENST00000427271 DMRT2Q9Y5R5 561 aa12.87□□□□□ -0.35
TTF2-202ENST00000427271 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
TTF2-202ENST00000427271 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
TTF2-202ENST00000427271 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
TTF2-202ENST00000427271 ATXN8OSP0DMR3 200 aa12.39□□□□□ -0.43
TTF2-202ENST00000427271 DCAF8L1A6NGE4 600 aa12.21□□□□□ -0.45
TTF2-202ENST00000427271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.466e-6■■■□□ 18.8
TTF2-202ENST00000427271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
TTF2-202ENST00000427271 HNRNPUL2Q1KMD3 747 aaKnown RBP12.07□□□□□ -0.48
TTF2-202ENST00000427271 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
TTF2-202ENST00000427271 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
TTF2-202ENST00000427271 U3KPZ7 1027 aaPredicted RBP12.06□□□□□ -0.48
TTF2-202ENST00000427271 FKBP8Q14318 412 aa12.03□□□□□ -0.48
TTF2-202ENST00000427271 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
TTF2-202ENST00000427271 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
TTF2-202ENST00000427271 APLP2Q06481 763 aa11.81□□□□□ -0.52
TTF2-202ENST00000427271 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
TTF2-202ENST00000427271 CCDC180Q9P1Z9 1646 aa11.78□□□□□ -0.52
TTF2-202ENST00000427271 POTEDQ86YR6 584 aa11.74□□□□□ -0.53
TTF2-202ENST00000427271 ABCC9O60706 1549 aa11.61□□□□□ -0.55
TTF2-202ENST00000427271 MKRN4PQ13434 485 aaPredicted RBP11.57□□□□□ -0.56
TTF2-202ENST00000427271 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
TTF2-202ENST00000427271 SLC24A1O60721 1099 aa11.56□□□□□ -0.56
TTF2-202ENST00000427271 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
TTF2-202ENST00000427271 SPDYE4A6NLX3 237 aa11.54□□□□□ -0.56
TTF2-202ENST00000427271 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
TTF2-202ENST00000427271 FBLN2P98095 1184 aa11.49□□□□□ -0.57
TTF2-202ENST00000427271 POLA2Q14181 598 aa11.48□□□□□ -0.57
TTF2-202ENST00000427271 PROM2Q8N271 834 aa11.48□□□□□ -0.57
TTF2-202ENST00000427271 FBXO3Q9UK99 471 aa11.47□□□□□ -0.57
TTF2-202ENST00000427271 C1QBPQ07021 282 aaKnown RBP11.46□□□□□ -0.57
TTF2-202ENST00000427271 CAPN15O75808 1086 aa11.45□□□□□ -0.58
TTF2-202ENST00000427271 ZBTB12Q9Y330 459 aaPredicted RBP11.34□□□□□ -0.59
TTF2-202ENST00000427271 VASPP50552 380 aaPredicted RBP11.31□□□□□ -0.6
TTF2-202ENST00000427271 ABCB7O75027 752 aa11.29□□□□□ -0.6
TTF2-202ENST00000427271 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
TTF2-202ENST00000427271 DSG3P32926 999 aa11.19□□□□□ -0.62
TTF2-202ENST00000427271 RB1CC1Q8TDY2 1594 aa11.11□□□□□ -0.63
TTF2-202ENST00000427271 ZNF692Q9BU19 519 aaPredicted RBP11.09□□□□□ -0.63
TTF2-202ENST00000427271 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
TTF2-202ENST00000427271 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
TTF2-202ENST00000427271 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
TTF2-202ENST00000427271 OSCARQ8IYS5 282 aa11.07□□□□□ -0.64
TTF2-202ENST00000427271 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
TTF2-202ENST00000427271 NACADO15069 1562 aa11.03□□□□□ -0.64
TTF2-202ENST00000427271 PKD2Q13563 968 aa11.03□□□□□ -0.64
TTF2-202ENST00000427271 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
TTF2-202ENST00000427271 PLCB2Q00722 1185 aa10.98□□□□□ -0.65
TTF2-202ENST00000427271 PABPN1Q86U42 306 aaKnown RBP eCLIP10.97□□□□□ -0.65
TTF2-202ENST00000427271 SPOCK2Q92563 424 aa10.97□□□□□ -0.65
TTF2-202ENST00000427271 UNC13AQ9UPW8 1703 aa10.95□□□□□ -0.66
TTF2-202ENST00000427271 KLHL34Q8N239 644 aa10.95□□□□□ -0.66
TTF2-202ENST00000427271 ZCCHC6Q5VYS8 1495 aaKnown RBP10.93□□□□□ -0.66
TTF2-202ENST00000427271 DCAF8L2P0C7V8 631 aa10.92□□□□□ -0.66
TTF2-202ENST00000427271 MYO15BQ96JP2 1530 aa10.91□□□□□ -0.66
TTF2-202ENST00000427271 PLCD3Q8N3E9 789 aa10.9□□□□□ -0.66
TTF2-202ENST00000427271 MIER1Q8N108 512 aa10.86□□□□□ -0.67
TTF2-202ENST00000427271 CACNB1Q02641 598 aaPredicted RBP10.85□□□□□ -0.67
TTF2-202ENST00000427271 ECM2O94769 699 aaPredicted RBP10.84□□□□□ -0.67
TTF2-202ENST00000427271 DCAF1Q9Y4B6 1507 aa10.83□□□□□ -0.68
TTF2-202ENST00000427271 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
TTF2-202ENST00000427271 HAP1P54257 671 aaPredicted RBP10.78□□□□□ -0.68
TTF2-202ENST00000427271 ZBTB47Q9UFB7 747 aaPredicted RBP10.77□□□□□ -0.69
TTF2-202ENST00000427271 PLEKHG5O94827 1062 aa10.76□□□□□ -0.69
TTF2-202ENST00000427271 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
TTF2-202ENST00000427271 RGL2O15211 777 aa10.74□□□□□ -0.69
TTF2-202ENST00000427271 BBXQ8WY36 941 aaPredicted RBP10.74□□□□□ -0.69
TTF2-202ENST00000427271 NPM1P06748 294 aaKnown RBP eCLIP10.72□□□□□ -0.69
TTF2-202ENST00000427271 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
TTF2-202ENST00000427271 CIZ1Q9ULV3 898 aaPredicted RBP10.68□□□□□ -0.7
TTF2-202ENST00000427271 VSIG10Q8N0Z9 540 aa10.67□□□□□ -0.7
TTF2-202ENST00000427271 TRIM41Q8WV44 630 aa10.65□□□□□ -0.7
TTF2-202ENST00000427271 SHROOM4Q9ULL8 1493 aa10.65□□□□□ -0.7
TTF2-202ENST00000427271 RBM42Q9BTD8 480 aaKnown RBP10.64□□□□□ -0.71
TTF2-202ENST00000427271 PAXIP1Q6ZW49 1069 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms