RNA–Protein interactions for RNA: ENST00000426609.1

AP000233.1-201, humanhuman

TSL 3 BASIC

Gene AP000233.1, Length 291 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000233.1-201ENST00000426609 AEBP2Q6ZN18 517 aaPredicted RBP25.58■■□□□ 1.69
AP000233.1-201ENST00000426609 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
AP000233.1-201ENST00000426609 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
AP000233.1-201ENST00000426609 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
AP000233.1-201ENST00000426609 FOXD1Q16676 465 aa20.26■□□□□ 0.83
AP000233.1-201ENST00000426609 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
AP000233.1-201ENST00000426609 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
AP000233.1-201ENST00000426609 ADRA2BP18089 450 aa19.19■□□□□ 0.66
AP000233.1-201ENST00000426609 PIAS4Q8N2W9 510 aaPredicted RBP19.01■□□□□ 0.63
AP000233.1-201ENST00000426609 MSH5O43196 834 aa18.83■□□□□ 0.6
AP000233.1-201ENST00000426609 POTEDQ86YR6 584 aa17.69■□□□□ 0.42
AP000233.1-201ENST00000426609 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
AP000233.1-201ENST00000426609 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
AP000233.1-201ENST00000426609 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
AP000233.1-201ENST00000426609 DMRT2Q9Y5R5 561 aa17.34■□□□□ 0.37
AP000233.1-201ENST00000426609 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
AP000233.1-201ENST00000426609 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
AP000233.1-201ENST00000426609 HOXD11P31277 338 aaPredicted RBP16.86■□□□□ 0.29
AP000233.1-201ENST00000426609 RNF216Q9NWF9 866 aaPredicted RBP16.84■□□□□ 0.29
AP000233.1-201ENST00000426609 KCNA4P22459 653 aa16.71■□□□□ 0.27
AP000233.1-201ENST00000426609 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
AP000233.1-201ENST00000426609 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
AP000233.1-201ENST00000426609 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
AP000233.1-201ENST00000426609 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
AP000233.1-201ENST00000426609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.07■□□□□ 0.16
AP000233.1-201ENST00000426609 CACNB1Q02641 598 aaPredicted RBP15.91■□□□□ 0.14
AP000233.1-201ENST00000426609 C1QBPQ07021 282 aaKnown RBP15.89■□□□□ 0.13
AP000233.1-201ENST00000426609 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
AP000233.1-201ENST00000426609 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
AP000233.1-201ENST00000426609 U3KPZ7 1027 aaPredicted RBP15.75■□□□□ 0.11
AP000233.1-201ENST00000426609 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
AP000233.1-201ENST00000426609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
AP000233.1-201ENST00000426609 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
AP000233.1-201ENST00000426609 MYCNP04198 464 aaPredicted RBP15.45■□□□□ 0.06
AP000233.1-201ENST00000426609 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
AP000233.1-201ENST00000426609 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
AP000233.1-201ENST00000426609 APLP2Q06481 763 aa15.4■□□□□ 0.06
AP000233.1-201ENST00000426609 CAPN15O75808 1086 aa15.37■□□□□ 0.05
AP000233.1-201ENST00000426609 ZBTB22O15209 634 aa15.36■□□□□ 0.05
AP000233.1-201ENST00000426609 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
AP000233.1-201ENST00000426609 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
AP000233.1-201ENST00000426609 DSG3P32926 999 aa15.19■□□□□ 0.02
AP000233.1-201ENST00000426609 ABCB7O75027 752 aa15.04■□□□□ -0
AP000233.1-201ENST00000426609 ATF5Q9Y2D1 282 aaPredicted RBP15.04■□□□□ -0
AP000233.1-201ENST00000426609 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
AP000233.1-201ENST00000426609 EHMT2Q96KQ7 1210 aa15.02■□□□□ -0
AP000233.1-201ENST00000426609 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
AP000233.1-201ENST00000426609 POLA2Q14181 598 aa14.91□□□□□ -0.02
AP000233.1-201ENST00000426609 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
AP000233.1-201ENST00000426609 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
AP000233.1-201ENST00000426609 FBLN2P98095 1184 aa14.46□□□□□ -0.09
AP000233.1-201ENST00000426609 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
AP000233.1-201ENST00000426609 MKRN4PQ13434 485 aaPredicted RBP14.37□□□□□ -0.11
AP000233.1-201ENST00000426609 AKT1S1Q96B36 256 aa14.26□□□□□ -0.13
AP000233.1-201ENST00000426609 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
AP000233.1-201ENST00000426609 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
AP000233.1-201ENST00000426609 SPDYE2Q495Y8 402 aa14.23□□□□□ -0.13
AP000233.1-201ENST00000426609 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
AP000233.1-201ENST00000426609 REM2Q8IYK8 340 aaPredicted RBP14.11□□□□□ -0.15
AP000233.1-201ENST00000426609 SSUH2Q9Y2M2 353 aa14.07□□□□□ -0.16
AP000233.1-201ENST00000426609 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
AP000233.1-201ENST00000426609 POTEHQ6S545 545 aa13.95□□□□□ -0.18
AP000233.1-201ENST00000426609 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
AP000233.1-201ENST00000426609 SPDYE4A6NLX3 237 aa13.91□□□□□ -0.18
AP000233.1-201ENST00000426609 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
AP000233.1-201ENST00000426609 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
AP000233.1-201ENST00000426609 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
AP000233.1-201ENST00000426609 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
AP000233.1-201ENST00000426609 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
AP000233.1-201ENST00000426609 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
AP000233.1-201ENST00000426609 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
AP000233.1-201ENST00000426609 PROM2Q8N271 834 aa13.64□□□□□ -0.23
AP000233.1-201ENST00000426609 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
AP000233.1-201ENST00000426609 FKBP8Q14318 412 aa13.6□□□□□ -0.23
AP000233.1-201ENST00000426609 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
AP000233.1-201ENST00000426609 HAX1O00165 279 aa13.42□□□□□ -0.26
AP000233.1-201ENST00000426609 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
AP000233.1-201ENST00000426609 FARP1Q9Y4F1 1045 aaPredicted RBP13.37□□□□□ -0.27
AP000233.1-201ENST00000426609 C19orf67A6NJJ6 358 aa13.3□□□□□ -0.28
AP000233.1-201ENST00000426609 EVX2Q03828 476 aa13.26□□□□□ -0.29
AP000233.1-201ENST00000426609 SP7Q8TDD2 431 aaPredicted RBP13.26□□□□□ -0.29
AP000233.1-201ENST00000426609 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
AP000233.1-201ENST00000426609 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
AP000233.1-201ENST00000426609 MIER1Q8N108 512 aa13.23□□□□□ -0.29
AP000233.1-201ENST00000426609 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
AP000233.1-201ENST00000426609 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
AP000233.1-201ENST00000426609 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
AP000233.1-201ENST00000426609 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
AP000233.1-201ENST00000426609 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
AP000233.1-201ENST00000426609 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
AP000233.1-201ENST00000426609 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
AP000233.1-201ENST00000426609 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
AP000233.1-201ENST00000426609 GABBR2O75899 941 aa13□□□□□ -0.33
AP000233.1-201ENST00000426609 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
AP000233.1-201ENST00000426609 CLCN6P51797 869 aa12.98□□□□□ -0.33
AP000233.1-201ENST00000426609 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
AP000233.1-201ENST00000426609 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
AP000233.1-201ENST00000426609 NUBP1P53384 320 aa12.92□□□□□ -0.34
AP000233.1-201ENST00000426609 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
AP000233.1-201ENST00000426609 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms