RNA–Protein interactions for RNA: ENST00000426413.1

LINC02476-201, Transcript of long intergenic non-protein coding RNA 2476, humanhuman

TSL 2 BASIC

Gene LINC02476, Length 1,577 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02476-201ENST00000426413 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
LINC02476-201ENST00000426413 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
LINC02476-201ENST00000426413 SENP3Q9H4L4 574 aaPredicted RBP22.54■■□□□ 1.2
LINC02476-201ENST00000426413 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
LINC02476-201ENST00000426413 FOXD1Q16676 465 aa20.97■□□□□ 0.95
LINC02476-201ENST00000426413 PLPPR3Q6T4P5 718 aa20.5■□□□□ 0.87
LINC02476-201ENST00000426413 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
LINC02476-201ENST00000426413 ADRA2BP18089 450 aa19.81■□□□□ 0.76
LINC02476-201ENST00000426413 PIAS4Q8N2W9 510 aaPredicted RBP19.66■□□□□ 0.74
LINC02476-201ENST00000426413 MSH5O43196 834 aa19.49■□□□□ 0.71
LINC02476-201ENST00000426413 POTEDQ86YR6 584 aa18.47■□□□□ 0.55
LINC02476-201ENST00000426413 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
LINC02476-201ENST00000426413 MAPK8IP2Q13387 824 aaPredicted RBP18.1■□□□□ 0.49
LINC02476-201ENST00000426413 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
LINC02476-201ENST00000426413 DMRT2Q9Y5R5 561 aa17.92■□□□□ 0.46
LINC02476-201ENST00000426413 CNKSR2Q8WXI2 1034 aa17.6■□□□□ 0.41
LINC02476-201ENST00000426413 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
LINC02476-201ENST00000426413 HOXD11P31277 338 aaPredicted RBP17.4■□□□□ 0.38
LINC02476-201ENST00000426413 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
LINC02476-201ENST00000426413 NPM3O75607 178 aaKnown RBP17.16■□□□□ 0.34
LINC02476-201ENST00000426413 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
LINC02476-201ENST00000426413 KCNA4P22459 653 aa17.13■□□□□ 0.33
LINC02476-201ENST00000426413 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
LINC02476-201ENST00000426413 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
LINC02476-201ENST00000426413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.248e-8■■□□□ 13.2
LINC02476-201ENST00000426413 CACNB1Q02641 598 aaPredicted RBP16.51■□□□□ 0.23
LINC02476-201ENST00000426413 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
LINC02476-201ENST00000426413 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
LINC02476-201ENST00000426413 U3KPZ7 1027 aaPredicted RBP16.26■□□□□ 0.19
LINC02476-201ENST00000426413 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
LINC02476-201ENST00000426413 SPINK5Q9NQ38 1064 aaPredicted RBP15.92■□□□□ 0.14
LINC02476-201ENST00000426413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
LINC02476-201ENST00000426413 HNRNPUL2Q1KMD3 747 aaKnown RBP15.92■□□□□ 0.14
LINC02476-201ENST00000426413 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
LINC02476-201ENST00000426413 CAPN15O75808 1086 aa15.87■□□□□ 0.13
LINC02476-201ENST00000426413 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
LINC02476-201ENST00000426413 APLP2Q06481 763 aa15.83■□□□□ 0.13
LINC02476-201ENST00000426413 SAMD1Q6SPF0 538 aaPredicted RBP15.83■□□□□ 0.13
LINC02476-201ENST00000426413 ZBTB22O15209 634 aa15.76■□□□□ 0.11
LINC02476-201ENST00000426413 DSG3P32926 999 aa15.72■□□□□ 0.11
LINC02476-201ENST00000426413 TRHP20396 242 aaPredicted RBP15.7■□□□□ 0.1
LINC02476-201ENST00000426413 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
LINC02476-201ENST00000426413 ABCB7O75027 752 aa15.53■□□□□ 0.08
LINC02476-201ENST00000426413 ATF5Q9Y2D1 282 aaPredicted RBP15.48■□□□□ 0.07
LINC02476-201ENST00000426413 ATXN8OSP0DMR3 200 aa15.37■□□□□ 0.05
LINC02476-201ENST00000426413 POLA2Q14181 598 aa15.36■□□□□ 0.05
LINC02476-201ENST00000426413 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
LINC02476-201ENST00000426413 EHMT2Q96KQ7 1210 aa15.28■□□□□ 0.04
LINC02476-201ENST00000426413 ZBTB12Q9Y330 459 aaPredicted RBP15.07■□□□□ 0
LINC02476-201ENST00000426413 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
LINC02476-201ENST00000426413 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
LINC02476-201ENST00000426413 FBLN2P98095 1184 aa14.84□□□□□ -0.03
LINC02476-201ENST00000426413 MKRN4PQ13434 485 aaPredicted RBP14.79□□□□□ -0.04
LINC02476-201ENST00000426413 AKT1S1Q96B36 256 aa14.72□□□□□ -0.05
LINC02476-201ENST00000426413 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
LINC02476-201ENST00000426413 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
LINC02476-201ENST00000426413 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
LINC02476-201ENST00000426413 REM2Q8IYK8 340 aaPredicted RBP14.57□□□□□ -0.08
LINC02476-201ENST00000426413 POTEHQ6S545 545 aa14.53□□□□□ -0.08
LINC02476-201ENST00000426413 CHRDL2Q6WN34 429 aa14.52□□□□□ -0.08
LINC02476-201ENST00000426413 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
LINC02476-201ENST00000426413 SSUH2Q9Y2M2 353 aa14.49□□□□□ -0.09
LINC02476-201ENST00000426413 PITPNM1O00562 1244 aa14.41□□□□□ -0.1
LINC02476-201ENST00000426413 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
LINC02476-201ENST00000426413 SPDYE1Q8NFV5 336 aaPredicted RBP14.3□□□□□ -0.12
LINC02476-201ENST00000426413 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
LINC02476-201ENST00000426413 PIP4P2Q8N4L2 257 aa14.25□□□□□ -0.13
LINC02476-201ENST00000426413 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
LINC02476-201ENST00000426413 FXR2P51116 673 aaKnown RBP eCLIP14.23□□□□□ -0.13
LINC02476-201ENST00000426413 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
LINC02476-201ENST00000426413 PRKAR2AP13861 404 aaKnown RBP14.04□□□□□ -0.16
LINC02476-201ENST00000426413 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
LINC02476-201ENST00000426413 PROM2Q8N271 834 aa13.97□□□□□ -0.17
LINC02476-201ENST00000426413 CHADLQ6NUI6 762 aa13.95□□□□□ -0.18
LINC02476-201ENST00000426413 HAX1O00165 279 aa13.9□□□□□ -0.18
LINC02476-201ENST00000426413 FKBP8Q14318 412 aa13.87□□□□□ -0.19
LINC02476-201ENST00000426413 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
LINC02476-201ENST00000426413 FARP1Q9Y4F1 1045 aaPredicted RBP13.79□□□□□ -0.2
LINC02476-201ENST00000426413 SP7Q8TDD2 431 aaPredicted RBP13.78□□□□□ -0.2
LINC02476-201ENST00000426413 C19orf67A6NJJ6 358 aa13.76□□□□□ -0.21
LINC02476-201ENST00000426413 EVX2Q03828 476 aa13.76□□□□□ -0.21
LINC02476-201ENST00000426413 CD44P16070 742 aaKnown RBP13.62□□□□□ -0.23
LINC02476-201ENST00000426413 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
LINC02476-201ENST00000426413 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC02476-201ENST00000426413 MIER1Q8N108 512 aa13.55□□□□□ -0.24
LINC02476-201ENST00000426413 PLEKHG5O94827 1062 aa13.5□□□□□ -0.25
LINC02476-201ENST00000426413 FBXO3Q9UK99 471 aa13.49□□□□□ -0.25
LINC02476-201ENST00000426413 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
LINC02476-201ENST00000426413 GABBR2O75899 941 aa13.47□□□□□ -0.25
LINC02476-201ENST00000426413 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
LINC02476-201ENST00000426413 PAK3O75914 559 aaPredicted RBP13.43□□□□□ -0.26
LINC02476-201ENST00000426413 ZNF579Q8NAF0 562 aaKnown RBP13.43□□□□□ -0.26
LINC02476-201ENST00000426413 CLCN6P51797 869 aa13.39□□□□□ -0.27
LINC02476-201ENST00000426413 ZBTB47Q9UFB7 747 aaPredicted RBP13.37□□□□□ -0.27
LINC02476-201ENST00000426413 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
LINC02476-201ENST00000426413 PHF12Q96QT6 1004 aa13.32□□□□□ -0.28
LINC02476-201ENST00000426413 TSPYL2Q9H2G4 693 aaPredicted RBP13.32□□□□□ -0.28
LINC02476-201ENST00000426413 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
LINC02476-201ENST00000426413 NUBP1P53384 320 aa13.26□□□□□ -0.29
LINC02476-201ENST00000426413 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms