RNA–Protein interactions for RNA: ENST00000426413.1

LINC02476-201, Transcript of long intergenic non-protein coding RNA 2476, humanhuman

TSL 2 BASIC

Gene LINC02476, Length 1,577 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02476-201ENST00000426413 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.79□□□□□ -1.642e-8■■■■■ 117.7
LINC02476-201ENST00000426413 FMR1Q06787 632 aaKnown RBP eCLIP7.54□□□□□ -1.25e-8■■■■■ 110.5
LINC02476-201ENST00000426413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.37□□□□□ -1.071e-6■■■■■ 78.5
LINC02476-201ENST00000426413 HNRNPCP07910 306 aaKnown RBP eCLIP5.17□□□□□ -1.582e-14■■■■■ 41.1
LINC02476-201ENST00000426413 SF3B1O75533 1304 aaKnown RBP eCLIP5.2□□□□□ -1.582e-6■■■■■ 36.9
LINC02476-201ENST00000426413 EIF4G2P78344 907 aaKnown RBP eCLIP9.1□□□□□ -0.954e-12■■■■■ 33.6
LINC02476-201ENST00000426413 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.53□□□□□ -1.691e-6■■■■■ 30.8
LINC02476-201ENST00000426413 TARDBPQ13148 414 aaKnown RBP eCLIP5.29□□□□□ -1.569e-7■■■■■ 29.7
LINC02476-201ENST00000426413 QKIQ96PU8 341 aaKnown RBP eCLIP5.15□□□□□ -1.592e-7■■■■■ 29.5
LINC02476-201ENST00000426413 HNRNPLP14866 589 aaKnown RBP eCLIP5.8□□□□□ -1.488e-7■■■■□ 25.2
LINC02476-201ENST00000426413 ZRANB2O95218 330 aaKnown RBP eCLIP5.51□□□□□ -1.533e-6■■■■□ 24.5
LINC02476-201ENST00000426413 LARP4Q71RC2 724 aaKnown RBP eCLIP6.02□□□□□ -1.453e-7■■■■□ 21.5
LINC02476-201ENST00000426413 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.21□□□□□ -1.582e-6■■■■□ 20
LINC02476-201ENST00000426413 NOLC1Q14978 699 aaKnown RBP eCLIP6.02□□□□□ -1.453e-7■■■□□ 18.2
LINC02476-201ENST00000426413 PTBP1P26599 531 aaKnown RBP eCLIP4.44□□□□□ -1.72e-8■■■□□ 17.8
LINC02476-201ENST00000426413 SAFB2Q14151 953 aaKnown RBP eCLIP6.79□□□□□ -1.323e-7■■■□□ 17.7
LINC02476-201ENST00000426413 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.35□□□□□ -1.391e-6■■■□□ 17.7
LINC02476-201ENST00000426413 MATR3P43243 847 aaKnown RBP eCLIP5.45□□□□□ -1.549e-7■■■□□ 17.4
LINC02476-201ENST00000426413 KHSRPQ92945 711 aaKnown RBP eCLIP11.71□□□□□ -0.541e-7■■■□□ 17.3
LINC02476-201ENST00000426413 AGGF1Q8N302 714 aaeCLIP7.97□□□□□ -1.139e-7■■■□□ 17.1
LINC02476-201ENST00000426413 LSM11P83369 360 aaKnown RBP eCLIP11.41□□□□□ -0.588e-30■■■□□ 16.6
LINC02476-201ENST00000426413 WDR43Q15061 677 aaKnown RBP eCLIP6.68□□□□□ -1.345e-7■■■□□ 16.6
LINC02476-201ENST00000426413 NIPBLQ6KC79 2804 aaeCLIP3.73□□□□□ -1.814e-7■■■□□ 16.5
LINC02476-201ENST00000426413 RBFOX2O43251 390 aaKnown RBP eCLIP4.07□□□□□ -1.762e-6■■■□□ 16.4
LINC02476-201ENST00000426413 GPKOWQ92917 476 aaPredicted RBP eCLIP9.56□□□□□ -0.889e-9■■■□□ 15.8
LINC02476-201ENST00000426413 TIA1P31483 386 aaKnown RBP eCLIP4.79□□□□□ -1.642e-6■■■□□ 15.8
LINC02476-201ENST00000426413 CPSF6Q16630 551 aaKnown RBP eCLIP7.63□□□□□ -1.195e-9■■■□□ 15.7
LINC02476-201ENST00000426413 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.98□□□□□ -1.295e-9■■■□□ 15.6
LINC02476-201ENST00000426413 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.9□□□□□ -1.635e-6■■■□□ 15.1
LINC02476-201ENST00000426413 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.94□□□□□ -1.461e-6■■■□□ 15
LINC02476-201ENST00000426413 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.65□□□□□ -1.661e-6■■□□□ 13.9
LINC02476-201ENST00000426413 SAFBQ15424 915 aaKnown RBP eCLIP5.78□□□□□ -1.482e-6■■□□□ 13.8
LINC02476-201ENST00000426413 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.22□□□□□ -1.572e-7■■□□□ 13.7
LINC02476-201ENST00000426413 FUSP35637 526 aaKnown RBP eCLIP3.18□□□□□ -1.92e-6■■□□□ 13.3
LINC02476-201ENST00000426413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.248e-8■■□□□ 13.2
LINC02476-201ENST00000426413 HLTFQ14527 1009 aaKnown RBP eCLIP5.44□□□□□ -1.544e-7■■□□□ 13.2
LINC02476-201ENST00000426413 ZNF622Q969S3 477 aaKnown RBP eCLIP5.92□□□□□ -1.468e-8■■□□□ 12.7
LINC02476-201ENST00000426413 GTF2F1P35269 517 aaKnown RBP eCLIP6.12□□□□□ -1.432e-6■■□□□ 12.6
LINC02476-201ENST00000426413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.45□□□□□ -1.226e-8■■□□□ 12.1
LINC02476-201ENST00000426413 HNRNPKP61978 463 aaKnown RBP eCLIP4.75□□□□□ -1.653e-7■■□□□ 12
LINC02476-201ENST00000426413 U2AF2P26368 475 aaKnown RBP eCLIP5.74□□□□□ -1.495e-7■■□□□ 12
LINC02476-201ENST00000426413 HNRNPMP52272 730 aaKnown RBP eCLIP7.29□□□□□ -1.245e-6■■□□□ 11.8
LINC02476-201ENST00000426413 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.5□□□□□ -1.536e-7■■□□□ 11.6
LINC02476-201ENST00000426413 HNRNPA1P09651 372 aaKnown RBP eCLIP5.05□□□□□ -1.62e-6■□□□□ 11.2
LINC02476-201ENST00000426413 XRCC6P12956 609 aaKnown RBP eCLIP5.72□□□□□ -1.493e-8■□□□□ 11
LINC02476-201ENST00000426413 ILF3Q12906 894 aaKnown RBP eCLIP4.8□□□□□ -1.642e-6■□□□□ 10
LINC02476-201ENST00000426413 METAP2P50579 478 aaKnown RBP eCLIP5.84□□□□□ -1.479e-16■□□□□ 9.7
LINC02476-201ENST00000426413 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.72□□□□□ -1.494e-7■□□□□ 8.9
LINC02476-201ENST00000426413 SRSF1Q07955 248 aaKnown RBP eCLIP4.71□□□□□ -1.662e-7■□□□□ 8.7
Retrieved 49 of 49 RNA–protein pairs in 11.8 ms