RNA–Protein interactions for RNA: ENST00000425663.5

MS4A4E-203, Transcript of membrane spanning 4-domains A4E, humanhuman

TSL 1 (best) BASIC

Gene MS4A4E, Length 350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4E-203ENST00000425663 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
MS4A4E-203ENST00000425663 CHIC1Q5VXU3 224 aa15.06■□□□□ 0
MS4A4E-203ENST00000425663 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
MS4A4E-203ENST00000425663 SENP3Q9H4L4 574 aaPredicted RBP13.13□□□□□ -0.31
MS4A4E-203ENST00000425663 FOXD1Q16676 465 aa12.35□□□□□ -0.43
MS4A4E-203ENST00000425663 PLPPR3Q6T4P5 718 aa12.07□□□□□ -0.48
MS4A4E-203ENST00000425663 PPP6R1Q9UPN7 881 aa11.85□□□□□ -0.51
MS4A4E-203ENST00000425663 ADRA2BP18089 450 aa11.78□□□□□ -0.52
MS4A4E-203ENST00000425663 PIAS4Q8N2W9 510 aaPredicted RBP11.52□□□□□ -0.57
MS4A4E-203ENST00000425663 MSH5O43196 834 aa11.27□□□□□ -0.61
MS4A4E-203ENST00000425663 MAPK8IP2Q13387 824 aaPredicted RBP10.77□□□□□ -0.69
MS4A4E-203ENST00000425663 PPP4R3CPQ6ZMV5 832 aa10.7□□□□□ -0.7
MS4A4E-203ENST00000425663 POTEDQ86YR6 584 aa10.66□□□□□ -0.7
MS4A4E-203ENST00000425663 SCAF1Q9H7N4 1312 aaKnown RBP10.53□□□□□ -0.72
MS4A4E-203ENST00000425663 DMRT2Q9Y5R5 561 aa10.52□□□□□ -0.73
MS4A4E-203ENST00000425663 KCNA4P22459 653 aa10.36□□□□□ -0.75
MS4A4E-203ENST00000425663 CNKSR2Q8WXI2 1034 aa10.36□□□□□ -0.75
MS4A4E-203ENST00000425663 NPM3O75607 178 aaKnown RBP10.26□□□□□ -0.77
MS4A4E-203ENST00000425663 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
MS4A4E-203ENST00000425663 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
MS4A4E-203ENST00000425663 RNF216Q9NWF9 866 aaPredicted RBP10.21□□□□□ -0.77
MS4A4E-203ENST00000425663 DCAF8L1A6NGE4 600 aa10.02□□□□□ -0.81
MS4A4E-203ENST00000425663 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.82
MS4A4E-203ENST00000425663 SLC4A2P04920 1241 aa9.78□□□□□ -0.84
MS4A4E-203ENST00000425663 RNF39Q9H2S5 420 aa9.74□□□□□ -0.85
MS4A4E-203ENST00000425663 SLC4A1APQ9BWU0 796 aaKnown RBP9.73□□□□□ -0.85
MS4A4E-203ENST00000425663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.7□□□□□ -0.86
MS4A4E-203ENST00000425663 U3KPZ7 1027 aaPredicted RBP9.64□□□□□ -0.87
MS4A4E-203ENST00000425663 ZBTB22O15209 634 aa9.61□□□□□ -0.87
MS4A4E-203ENST00000425663 CACNB1Q02641 598 aaPredicted RBP9.53□□□□□ -0.88
MS4A4E-203ENST00000425663 C1QBPQ07021 282 aaKnown RBP9.53□□□□□ -0.88
MS4A4E-203ENST00000425663 FOXD4L1Q9NU39 408 aa9.46□□□□□ -0.9
MS4A4E-203ENST00000425663 SPINK5Q9NQ38 1064 aaPredicted RBP9.45□□□□□ -0.9
MS4A4E-203ENST00000425663 MYCNP04198 464 aaPredicted RBP9.38□□□□□ -0.91
MS4A4E-203ENST00000425663 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
MS4A4E-203ENST00000425663 EHMT2Q96KQ7 1210 aa9.35□□□□□ -0.91
MS4A4E-203ENST00000425663 ATF5Q9Y2D1 282 aaPredicted RBP9.34□□□□□ -0.91
MS4A4E-203ENST00000425663 CAPN15O75808 1086 aa9.29□□□□□ -0.92
MS4A4E-203ENST00000425663 SAMD1Q6SPF0 538 aaPredicted RBP9.25□□□□□ -0.93
MS4A4E-203ENST00000425663 TRHP20396 242 aaPredicted RBP9.24□□□□□ -0.93
MS4A4E-203ENST00000425663 DSG3P32926 999 aa9.24□□□□□ -0.93
MS4A4E-203ENST00000425663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.23□□□□□ -0.93
MS4A4E-203ENST00000425663 HNRNPUL2Q1KMD3 747 aaKnown RBP9.23□□□□□ -0.93
MS4A4E-203ENST00000425663 ABCB7O75027 752 aa9.19□□□□□ -0.94
MS4A4E-203ENST00000425663 ZNF219Q9P2Y4 722 aaPredicted RBP9.13□□□□□ -0.95
MS4A4E-203ENST00000425663 APLP2Q06481 763 aa9.12□□□□□ -0.95
MS4A4E-203ENST00000425663 ATXN8OSP0DMR3 200 aa9.08□□□□□ -0.96
MS4A4E-203ENST00000425663 POLA2Q14181 598 aa9.08□□□□□ -0.96
MS4A4E-203ENST00000425663 MKRN4PQ13434 485 aaPredicted RBP8.9□□□□□ -0.98
MS4A4E-203ENST00000425663 OSCARQ8IYS5 282 aa8.79□□□□□ -1
MS4A4E-203ENST00000425663 ZBTB12Q9Y330 459 aaPredicted RBP8.74□□□□□ -1.01
MS4A4E-203ENST00000425663 FBLN2P98095 1184 aa8.69□□□□□ -1.02
MS4A4E-203ENST00000425663 RBM42Q9BTD8 480 aaKnown RBP8.64□□□□□ -1.03
MS4A4E-203ENST00000425663 SPDYE2BA6NHP3 402 aa8.58□□□□□ -1.04
MS4A4E-203ENST00000425663 SPDYE6P0CI01 402 aa8.58□□□□□ -1.04
MS4A4E-203ENST00000425663 SPDYE2Q495Y8 402 aa8.58□□□□□ -1.04
MS4A4E-203ENST00000425663 SSUH2Q9Y2M2 353 aa8.58□□□□□ -1.04
MS4A4E-203ENST00000425663 AKT1S1Q96B36 256 aa8.57□□□□□ -1.04
MS4A4E-203ENST00000425663 REM2Q8IYK8 340 aaPredicted RBP8.56□□□□□ -1.04
MS4A4E-203ENST00000425663 ZNF692Q9BU19 519 aaPredicted RBP8.55□□□□□ -1.04
MS4A4E-203ENST00000425663 SPDYE4A6NLX3 237 aa8.49□□□□□ -1.05
MS4A4E-203ENST00000425663 PITPNM1O00562 1244 aa8.49□□□□□ -1.05
MS4A4E-203ENST00000425663 PABPN1Q86U42 306 aaKnown RBP eCLIP8.47□□□□□ -1.05
MS4A4E-203ENST00000425663 CHRDL2Q6WN34 429 aa8.45□□□□□ -1.06
MS4A4E-203ENST00000425663 FKBP8Q14318 412 aa8.4□□□□□ -1.06
MS4A4E-203ENST00000425663 PROM2Q8N271 834 aa8.39□□□□□ -1.07
MS4A4E-203ENST00000425663 CLEC11AQ9Y240 323 aa8.37□□□□□ -1.07
MS4A4E-203ENST00000425663 POTEHQ6S545 545 aa8.36□□□□□ -1.07
MS4A4E-203ENST00000425663 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
MS4A4E-203ENST00000425663 FXR2P51116 673 aaKnown RBP eCLIP8.34□□□□□ -1.07
MS4A4E-203ENST00000425663 SPDYE1Q8NFV5 336 aaPredicted RBP8.34□□□□□ -1.07
MS4A4E-203ENST00000425663 CHADLQ6NUI6 762 aa8.28□□□□□ -1.08
MS4A4E-203ENST00000425663 PRR29P0C7W0 189 aa8.24□□□□□ -1.09
MS4A4E-203ENST00000425663 PRKAR2AP13861 404 aaKnown RBP8.24□□□□□ -1.09
MS4A4E-203ENST00000425663 CREBZFQ9NS37 354 aa8.21□□□□□ -1.1
MS4A4E-203ENST00000425663 EVX2Q03828 476 aa8.18□□□□□ -1.1
MS4A4E-203ENST00000425663 STAG3Q9UJ98 1225 aa8.16□□□□□ -1.1
MS4A4E-203ENST00000425663 MNX1P50219 401 aaPredicted RBP8.15□□□□□ -1.1
MS4A4E-203ENST00000425663 FARP1Q9Y4F1 1045 aaPredicted RBP8.11□□□□□ -1.11
MS4A4E-203ENST00000425663 C19orf67A6NJJ6 358 aa8.06□□□□□ -1.12
MS4A4E-203ENST00000425663 HAX1O00165 279 aa8.06□□□□□ -1.12
MS4A4E-203ENST00000425663 MIER1Q8N108 512 aa8.04□□□□□ -1.12
MS4A4E-203ENST00000425663 VASPP50552 380 aaPredicted RBP8.01□□□□□ -1.13
MS4A4E-203ENST00000425663 PLCD3Q8N3E9 789 aa7.98□□□□□ -1.13
MS4A4E-203ENST00000425663 FBXO3Q9UK99 471 aa7.98□□□□□ -1.13
MS4A4E-203ENST00000425663 CD44P16070 742 aaKnown RBP7.97□□□□□ -1.13
MS4A4E-203ENST00000425663 IFNLR1Q8IU57 520 aaPredicted RBP7.97□□□□□ -1.13
MS4A4E-203ENST00000425663 RASEFQ8IZ41 740 aa7.96□□□□□ -1.14
MS4A4E-203ENST00000425663 SP7Q8TDD2 431 aaPredicted RBP7.96□□□□□ -1.14
MS4A4E-203ENST00000425663 NUBP1P53384 320 aa7.94□□□□□ -1.14
MS4A4E-203ENST00000425663 ZRANB1Q9UGI0 708 aa7.91□□□□□ -1.14
MS4A4E-203ENST00000425663 PHF12Q96QT6 1004 aa7.9□□□□□ -1.14
MS4A4E-203ENST00000425663 NPM1P06748 294 aaKnown RBP eCLIP7.89□□□□□ -1.15
MS4A4E-203ENST00000425663 TSPYL2Q9H2G4 693 aaPredicted RBP7.89□□□□□ -1.15
MS4A4E-203ENST00000425663 GABBR2O75899 941 aa7.88□□□□□ -1.15
MS4A4E-203ENST00000425663 CCDC61Q9Y6R9 512 aa7.87□□□□□ -1.15
MS4A4E-203ENST00000425663 ZNF579Q8NAF0 562 aaKnown RBP7.86□□□□□ -1.15
MS4A4E-203ENST00000425663 PLEKHG5O94827 1062 aa7.84□□□□□ -1.15
MS4A4E-203ENST00000425663 KLHL34Q8N239 644 aa7.84□□□□□ -1.15
MS4A4E-203ENST00000425663 GALR2O43603 387 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms