RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 AEBP2Q6ZN18 517 aaPredicted RBP32.51■■■□□ 2.79
RAB3GAP1-202ENST00000425393 CHIC1Q5VXU3 224 aa31.12■■■□□ 2.57
RAB3GAP1-202ENST00000425393 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
RAB3GAP1-202ENST00000425393 PHF23Q9BUL5 403 aaPredicted RBP27.45■■□□□ 1.98
RAB3GAP1-202ENST00000425393 FOXD1Q16676 465 aa25.89■■□□□ 1.74
RAB3GAP1-202ENST00000425393 PLPPR3Q6T4P5 718 aa24.98■■□□□ 1.59
RAB3GAP1-202ENST00000425393 MSH5O43196 834 aa24.42■■□□□ 1.5
RAB3GAP1-202ENST00000425393 PPP6R1Q9UPN7 881 aa24.3■■□□□ 1.48
RAB3GAP1-202ENST00000425393 PIAS4Q8N2W9 510 aaPredicted RBP24.27■■□□□ 1.48
RAB3GAP1-202ENST00000425393 ADRA2BP18089 450 aa24.23■■□□□ 1.47
RAB3GAP1-202ENST00000425393 POTEDQ86YR6 584 aa23.79■■□□□ 1.4
RAB3GAP1-202ENST00000425393 SCAF1Q9H7N4 1312 aaKnown RBP22.24■■□□□ 1.15
RAB3GAP1-202ENST00000425393 MAPK8IP2Q13387 824 aaPredicted RBP22.17■■□□□ 1.14
RAB3GAP1-202ENST00000425393 DMRT2Q9Y5R5 561 aa22.07■■□□□ 1.12
RAB3GAP1-202ENST00000425393 PPP4R3CPQ6ZMV5 832 aa21.93■■□□□ 1.1
RAB3GAP1-202ENST00000425393 CNKSR2Q8WXI2 1034 aa21.45■■□□□ 1.02
RAB3GAP1-202ENST00000425393 HOXD11P31277 338 aaPredicted RBP21.29■■□□□ 1
RAB3GAP1-202ENST00000425393 DCAF8L1A6NGE4 600 aa21.24■□□□□ 0.99
RAB3GAP1-202ENST00000425393 RNF216Q9NWF9 866 aaPredicted RBP21.2■□□□□ 0.98
RAB3GAP1-202ENST00000425393 NCBP3Q53F19 620 aaKnown RBP21.14■□□□□ 0.97
RAB3GAP1-202ENST00000425393 CACNB1Q02641 598 aaPredicted RBP20.95■□□□□ 0.94
RAB3GAP1-202ENST00000425393 NPM3O75607 178 aaKnown RBP20.89■□□□□ 0.93
RAB3GAP1-202ENST00000425393 KCNA4P22459 653 aa20.73■□□□□ 0.91
RAB3GAP1-202ENST00000425393 RNF39Q9H2S5 420 aa20.73■□□□□ 0.91
RAB3GAP1-202ENST00000425393 DNAJC5BQ9UF47 199 aa20.59■□□□□ 0.89
RAB3GAP1-202ENST00000425393 C1QBPQ07021 282 aaKnown RBP20.51■□□□□ 0.87
RAB3GAP1-202ENST00000425393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.31■□□□□ 0.844e-6■□□□□ 8.4
RAB3GAP1-202ENST00000425393 U3KPZ7 1027 aaPredicted RBP19.91■□□□□ 0.78
RAB3GAP1-202ENST00000425393 SLC4A2P04920 1241 aa19.88■□□□□ 0.77
RAB3GAP1-202ENST00000425393 SLC4A1APQ9BWU0 796 aaKnown RBP19.6■□□□□ 0.73
RAB3GAP1-202ENST00000425393 CAPN15O75808 1086 aa19.56■□□□□ 0.72
RAB3GAP1-202ENST00000425393 SPINK5Q9NQ38 1064 aaPredicted RBP19.53■□□□□ 0.72
RAB3GAP1-202ENST00000425393 APLP2Q06481 763 aa19.46■□□□□ 0.71
RAB3GAP1-202ENST00000425393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.39■□□□□ 0.69
RAB3GAP1-202ENST00000425393 HNRNPUL2Q1KMD3 747 aaKnown RBP19.39■□□□□ 0.69
RAB3GAP1-202ENST00000425393 DSG3P32926 999 aa19.38■□□□□ 0.69
RAB3GAP1-202ENST00000425393 MYCNP04198 464 aaPredicted RBP19.31■□□□□ 0.68
RAB3GAP1-202ENST00000425393 SAMD1Q6SPF0 538 aaPredicted RBP19.31■□□□□ 0.68
RAB3GAP1-202ENST00000425393 FOXD4L1Q9NU39 408 aa19.26■□□□□ 0.67
RAB3GAP1-202ENST00000425393 ZNF219Q9P2Y4 722 aaPredicted RBP19.24■□□□□ 0.67
RAB3GAP1-202ENST00000425393 TRHP20396 242 aaPredicted RBP19.21■□□□□ 0.67
RAB3GAP1-202ENST00000425393 ZBTB22O15209 634 aa19.09■□□□□ 0.65
RAB3GAP1-202ENST00000425393 ABCB7O75027 752 aa19.04■□□□□ 0.64
RAB3GAP1-202ENST00000425393 ATF5Q9Y2D1 282 aaPredicted RBP18.85■□□□□ 0.61
RAB3GAP1-202ENST00000425393 POLA2Q14181 598 aa18.76■□□□□ 0.59
RAB3GAP1-202ENST00000425393 POTEHQ6S545 545 aa18.68■□□□□ 0.58
RAB3GAP1-202ENST00000425393 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
RAB3GAP1-202ENST00000425393 ATXN8OSP0DMR3 200 aa18.62■□□□□ 0.57
RAB3GAP1-202ENST00000425393 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
RAB3GAP1-202ENST00000425393 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
RAB3GAP1-202ENST00000425393 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
RAB3GAP1-202ENST00000425393 OSCARQ8IYS5 282 aa18.19■□□□□ 0.5
RAB3GAP1-202ENST00000425393 CHRDL2Q6WN34 429 aa18.16■□□□□ 0.5
RAB3GAP1-202ENST00000425393 AKT1S1Q96B36 256 aa18.15■□□□□ 0.5
RAB3GAP1-202ENST00000425393 FBLN2P98095 1184 aa18.06■□□□□ 0.48
RAB3GAP1-202ENST00000425393 MKRN4PQ13434 485 aaPredicted RBP18■□□□□ 0.47
RAB3GAP1-202ENST00000425393 REM2Q8IYK8 340 aaPredicted RBP17.91■□□□□ 0.46
RAB3GAP1-202ENST00000425393 SPDYE2BA6NHP3 402 aa17.86■□□□□ 0.45
RAB3GAP1-202ENST00000425393 SPDYE6P0CI01 402 aa17.86■□□□□ 0.45
RAB3GAP1-202ENST00000425393 SPDYE2Q495Y8 402 aa17.86■□□□□ 0.45
RAB3GAP1-202ENST00000425393 PITPNM1O00562 1244 aa17.71■□□□□ 0.43
RAB3GAP1-202ENST00000425393 PIP4P2Q8N4L2 257 aa17.68■□□□□ 0.42
RAB3GAP1-202ENST00000425393 SSUH2Q9Y2M2 353 aa17.68■□□□□ 0.42
RAB3GAP1-202ENST00000425393 ZNF692Q9BU19 519 aaPredicted RBP17.67■□□□□ 0.42
RAB3GAP1-202ENST00000425393 FXR2P51116 673 aaKnown RBP eCLIP17.57■□□□□ 0.4
RAB3GAP1-202ENST00000425393 SPDYE1Q8NFV5 336 aaPredicted RBP17.5■□□□□ 0.39
RAB3GAP1-202ENST00000425393 SP7Q8TDD2 431 aaPredicted RBP17.5■□□□□ 0.39
RAB3GAP1-202ENST00000425393 HAX1O00165 279 aa17.45■□□□□ 0.38
RAB3GAP1-202ENST00000425393 PABPN1Q86U42 306 aaKnown RBP eCLIP17.44■□□□□ 0.38
RAB3GAP1-202ENST00000425393 CLEC11AQ9Y240 323 aa17.43■□□□□ 0.38
RAB3GAP1-202ENST00000425393 PRKAR2AP13861 404 aaKnown RBP17.29■□□□□ 0.36
RAB3GAP1-202ENST00000425393 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
RAB3GAP1-202ENST00000425393 PRR29P0C7W0 189 aa17.17■□□□□ 0.34
RAB3GAP1-202ENST00000425393 CHADLQ6NUI6 762 aa17.08■□□□□ 0.32
RAB3GAP1-202ENST00000425393 EVX2Q03828 476 aa17.04■□□□□ 0.32
RAB3GAP1-202ENST00000425393 C19orf67A6NJJ6 358 aa17.02■□□□□ 0.32
RAB3GAP1-202ENST00000425393 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
RAB3GAP1-202ENST00000425393 PROM2Q8N271 834 aa16.92■□□□□ 0.3
RAB3GAP1-202ENST00000425393 FARP1Q9Y4F1 1045 aaPredicted RBP16.86■□□□□ 0.29
RAB3GAP1-202ENST00000425393 CREBZFQ9NS37 354 aa16.84■□□□□ 0.29
RAB3GAP1-202ENST00000425393 GABBR2O75899 941 aa16.77■□□□□ 0.28
RAB3GAP1-202ENST00000425393 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
RAB3GAP1-202ENST00000425393 FKBP8Q14318 412 aa16.69■□□□□ 0.26
RAB3GAP1-202ENST00000425393 CLCN6P51797 869 aa16.67■□□□□ 0.26
RAB3GAP1-202ENST00000425393 MNX1P50219 401 aaPredicted RBP16.6■□□□□ 0.25
RAB3GAP1-202ENST00000425393 ZRANB1Q9UGI0 708 aa16.51■□□□□ 0.23
RAB3GAP1-202ENST00000425393 NPM1P06748 294 aaKnown RBP eCLIP16.5■□□□□ 0.23
RAB3GAP1-202ENST00000425393 PAK3O75914 559 aaPredicted RBP16.49■□□□□ 0.23
RAB3GAP1-202ENST00000425393 ZNF579Q8NAF0 562 aaKnown RBP16.48■□□□□ 0.23
RAB3GAP1-202ENST00000425393 DCBLD2Q96PD2 775 aa16.42■□□□□ 0.22
RAB3GAP1-202ENST00000425393 LHX8Q68G74 356 aa16.41■□□□□ 0.22
RAB3GAP1-202ENST00000425393 MIER1Q8N108 512 aa16.41■□□□□ 0.22
RAB3GAP1-202ENST00000425393 PLEKHG5O94827 1062 aa16.37■□□□□ 0.21
RAB3GAP1-202ENST00000425393 POTEIP0CG38 1075 aa16.32■□□□□ 0.2
RAB3GAP1-202ENST00000425393 PLCD3Q8N3E9 789 aa16.32■□□□□ 0.2
RAB3GAP1-202ENST00000425393 PHF12Q96QT6 1004 aa16.3■□□□□ 0.2
RAB3GAP1-202ENST00000425393 GALR2O43603 387 aaPredicted RBP16.24■□□□□ 0.19
RAB3GAP1-202ENST00000425393 FBXO3Q9UK99 471 aa16.24■□□□□ 0.19
RAB3GAP1-202ENST00000425393 TSPYL2Q9H2G4 693 aaPredicted RBP16.23■□□□□ 0.19
RAB3GAP1-202ENST00000425393 RASEFQ8IZ41 740 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms