RNA–Protein interactions for RNA: ENST00000424649.6

PXN-204, Transcript of paxillin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PXN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-204ENST00000424649 NISCHQ9Y2I1 1504 aa24.14■■□□□ 1.45
PXN-204ENST00000424649 SHROOM4Q9ULL8 1493 aa21.8■■□□□ 1.08
PXN-204ENST00000424649 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
PXN-204ENST00000424649 DCAF8L2P0C7V8 631 aa21.49■■□□□ 1.03
PXN-204ENST00000424649 CCDC180Q9P1Z9 1646 aa20.9■□□□□ 0.94
PXN-204ENST00000424649 PCGF6Q9BYE7 350 aa20.84■□□□□ 0.93
PXN-204ENST00000424649 EHMT2Q96KQ7 1210 aa20.68■□□□□ 0.9
PXN-204ENST00000424649 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.88
PXN-204ENST00000424649 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
PXN-204ENST00000424649 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
PXN-204ENST00000424649 HRCP23327 699 aa20.4■□□□□ 0.86
PXN-204ENST00000424649 ZCCHC6Q5VYS8 1495 aaKnown RBP20.35■□□□□ 0.85
PXN-204ENST00000424649 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
PXN-204ENST00000424649 MYO15BQ96JP2 1530 aa20.11■□□□□ 0.81
PXN-204ENST00000424649 TTBK1Q5TCY1 1321 aaPredicted RBP19.99■□□□□ 0.79
PXN-204ENST00000424649 DCAF1Q9Y4B6 1507 aa19.9■□□□□ 0.78
PXN-204ENST00000424649 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
PXN-204ENST00000424649 TRIM26Q12899 539 aaPredicted RBP19.75■□□□□ 0.75
PXN-204ENST00000424649 ABCC9O60706 1549 aa19.52■□□□□ 0.72
PXN-204ENST00000424649 CCER1Q8TC90 406 aaPredicted RBP19.46■□□□□ 0.71
PXN-204ENST00000424649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.46■□□□□ 0.71
PXN-204ENST00000424649 NACADO15069 1562 aa19.36■□□□□ 0.69
PXN-204ENST00000424649 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
PXN-204ENST00000424649 SCRIBQ14160 1630 aa19.34■□□□□ 0.69
PXN-204ENST00000424649 RANGAP1P46060 587 aaPredicted RBP19.33■□□□□ 0.68
PXN-204ENST00000424649 YTHDC1Q96MU7 727 aaKnown RBP19.3■□□□□ 0.68
PXN-204ENST00000424649 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
PXN-204ENST00000424649 RB1CC1Q8TDY2 1594 aa19.14■□□□□ 0.65
PXN-204ENST00000424649 UBTFP17480 764 aaKnown RBP19.09■□□□□ 0.65
PXN-204ENST00000424649 DIEXFQ68CQ4 756 aaKnown RBP19.01■□□□□ 0.63
PXN-204ENST00000424649 GTF3C3Q9Y5Q9 886 aa19■□□□□ 0.63
PXN-204ENST00000424649 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
PXN-204ENST00000424649 NEUROD1Q13562 356 aa18.97■□□□□ 0.63
PXN-204ENST00000424649 CENPBP07199 599 aaPredicted RBP18.96■□□□□ 0.63
PXN-204ENST00000424649 PELP1Q8IZL8 1130 aaKnown RBP18.93■□□□□ 0.62
PXN-204ENST00000424649 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
PXN-204ENST00000424649 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
PXN-204ENST00000424649 ACIN1Q9UKV3 1341 aaKnown RBP18.86■□□□□ 0.61
PXN-204ENST00000424649 APLP2Q06481 763 aa18.77■□□□□ 0.6
PXN-204ENST00000424649 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.59
PXN-204ENST00000424649 MROH2BQ7Z745 1585 aa18.69■□□□□ 0.58
PXN-204ENST00000424649 ITGAEP38570 1179 aa18.64■□□□□ 0.58
PXN-204ENST00000424649 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
PXN-204ENST00000424649 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
PXN-204ENST00000424649 WIZO95785 1651 aa18.6■□□□□ 0.57
PXN-204ENST00000424649 BICRAQ9NZM4 1560 aa18.59■□□□□ 0.57
PXN-204ENST00000424649 ZNF316A6NFI3 1004 aaPredicted RBP18.55■□□□□ 0.56
PXN-204ENST00000424649 MIER1Q8N108 512 aa18.52■□□□□ 0.56
PXN-204ENST00000424649 SMARCA4P51532 1647 aa18.52■□□□□ 0.55
PXN-204ENST00000424649 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
PXN-204ENST00000424649 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
PXN-204ENST00000424649 BCANQ96GW7 911 aa18.37■□□□□ 0.53
PXN-204ENST00000424649 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
PXN-204ENST00000424649 SOGA1O94964 1423 aa18.36■□□□□ 0.53
PXN-204ENST00000424649 CEP162Q5TB80 1403 aa18.35■□□□□ 0.53
PXN-204ENST00000424649 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
PXN-204ENST00000424649 CCDC88BA6NC98 1476 aa18.29■□□□□ 0.52
PXN-204ENST00000424649 PEG3Q9GZU2 1588 aa18.23■□□□□ 0.51
PXN-204ENST00000424649 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
PXN-204ENST00000424649 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
PXN-204ENST00000424649 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
PXN-204ENST00000424649 HIRIP3Q9BW71 556 aaPredicted RBP18.14■□□□□ 0.5
PXN-204ENST00000424649 ATAD2BQ9ULI0 1458 aa18.1■□□□□ 0.49
PXN-204ENST00000424649 CNGB1Q14028 1251 aaPredicted RBP18.09■□□□□ 0.49
PXN-204ENST00000424649 P3H3Q8IVL6 736 aa18.07■□□□□ 0.48
PXN-204ENST00000424649 TNIKQ9UKE5 1360 aa18.05■□□□□ 0.48
PXN-204ENST00000424649 FAM50AQ14320 339 aaKnown RBP18.04■□□□□ 0.48
PXN-204ENST00000424649 CLIP1P30622 1438 aa18.03■□□□□ 0.48
PXN-204ENST00000424649 BAZ1BQ9UIG0 1483 aaKnown RBP18.03■□□□□ 0.48
PXN-204ENST00000424649 DDX10Q13206 875 aaKnown RBP17.99■□□□□ 0.47
PXN-204ENST00000424649 KCNH8Q96L42 1107 aa17.98■□□□□ 0.47
PXN-204ENST00000424649 MYT1Q01538 1121 aa17.96■□□□□ 0.47
PXN-204ENST00000424649 TRIM52Q96A61 297 aa17.94■□□□□ 0.46
PXN-204ENST00000424649 KANK4Q5T7N3 995 aaPredicted RBP17.94■□□□□ 0.46
PXN-204ENST00000424649 GOLGA3Q08378 1498 aa17.93■□□□□ 0.46
PXN-204ENST00000424649 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
PXN-204ENST00000424649 NEFLP07196 543 aa17.92■□□□□ 0.46
PXN-204ENST00000424649 FKBP8Q14318 412 aa17.92■□□□□ 0.46
PXN-204ENST00000424649 SUPT16HQ9Y5B9 1047 aaKnown RBP17.9■□□□□ 0.46
PXN-204ENST00000424649 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
PXN-204ENST00000424649 NCAPD3P42695 1498 aa17.85■□□□□ 0.45
PXN-204ENST00000424649 SIN3AQ96ST3 1273 aa17.84■□□□□ 0.45
PXN-204ENST00000424649 IRX6P78412 446 aaPredicted RBP17.82■□□□□ 0.44
PXN-204ENST00000424649 POLR3GLQ9BT43 218 aa17.76■□□□□ 0.43
PXN-204ENST00000424649 ARID3CA6NKF2 412 aa17.76■□□□□ 0.43
PXN-204ENST00000424649 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
PXN-204ENST00000424649 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
PXN-204ENST00000424649 CEP164Q9UPV0 1460 aa17.73■□□□□ 0.43
PXN-204ENST00000424649 ERICH6Q7L0X2 663 aa17.73■□□□□ 0.43
PXN-204ENST00000424649 EEA1Q15075 1411 aa17.72■□□□□ 0.43
PXN-204ENST00000424649 VPS8Q8N3P4 1428 aa17.71■□□□□ 0.43
PXN-204ENST00000424649 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
PXN-204ENST00000424649 TSHZ2Q9NRE2 1034 aa17.67■□□□□ 0.42
PXN-204ENST00000424649 ANP32CO43423 234 aa17.67■□□□□ 0.42
PXN-204ENST00000424649 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
PXN-204ENST00000424649 DHX57Q6P158 1386 aaKnown RBP17.64■□□□□ 0.41
PXN-204ENST00000424649 HNRNPUQ00839 825 aaKnown RBP eCLIP17.59■□□□□ 0.41
PXN-204ENST00000424649 PRDM2Q13029 1718 aa17.57■□□□□ 0.4
PXN-204ENST00000424649 TOP2BQ02880 1626 aa17.57■□□□□ 0.4
PXN-204ENST00000424649 CHIC2Q9UKJ5 165 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms