RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 AEBP2Q6ZN18 517 aaPredicted RBP21.46■■□□□ 1.03
SDCBPP2-201ENST00000424643 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
SDCBPP2-201ENST00000424643 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
SDCBPP2-201ENST00000424643 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
SDCBPP2-201ENST00000424643 FOXD1Q16676 465 aa17.13■□□□□ 0.33
SDCBPP2-201ENST00000424643 PLPPR3Q6T4P5 718 aa16.25■□□□□ 0.19
SDCBPP2-201ENST00000424643 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
SDCBPP2-201ENST00000424643 MSH5O43196 834 aa16.13■□□□□ 0.17
SDCBPP2-201ENST00000424643 PIAS4Q8N2W9 510 aaPredicted RBP15.92■□□□□ 0.14
SDCBPP2-201ENST00000424643 PPP6R1Q9UPN7 881 aa15.81■□□□□ 0.12
SDCBPP2-201ENST00000424643 ADRA2BP18089 450 aa15.75■□□□□ 0.11
SDCBPP2-201ENST00000424643 MAPK8IP2Q13387 824 aaPredicted RBP14.56□□□□□ -0.08
SDCBPP2-201ENST00000424643 DMRT2Q9Y5R5 561 aa14.49□□□□□ -0.09
SDCBPP2-201ENST00000424643 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
SDCBPP2-201ENST00000424643 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
SDCBPP2-201ENST00000424643 CACNB1Q02641 598 aaPredicted RBP14.04□□□□□ -0.16
SDCBPP2-201ENST00000424643 CNKSR2Q8WXI2 1034 aa13.94□□□□□ -0.18
SDCBPP2-201ENST00000424643 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
SDCBPP2-201ENST00000424643 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
SDCBPP2-201ENST00000424643 NCBP3Q53F19 620 aaKnown RBP13.82□□□□□ -0.2
SDCBPP2-201ENST00000424643 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
SDCBPP2-201ENST00000424643 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
SDCBPP2-201ENST00000424643 KCNA4P22459 653 aa13.7□□□□□ -0.22
SDCBPP2-201ENST00000424643 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
SDCBPP2-201ENST00000424643 C1QBPQ07021 282 aaKnown RBP13.53□□□□□ -0.24
SDCBPP2-201ENST00000424643 DNAJC5BQ9UF47 199 aa13.42□□□□□ -0.26
SDCBPP2-201ENST00000424643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.2□□□□□ -0.3
SDCBPP2-201ENST00000424643 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
SDCBPP2-201ENST00000424643 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
SDCBPP2-201ENST00000424643 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
SDCBPP2-201ENST00000424643 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
SDCBPP2-201ENST00000424643 CAPN15O75808 1086 aa12.78□□□□□ -0.36
SDCBPP2-201ENST00000424643 DSG3P32926 999 aa12.78□□□□□ -0.36
SDCBPP2-201ENST00000424643 POTEHQ6S545 545 aa12.68□□□□□ -0.38
SDCBPP2-201ENST00000424643 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
SDCBPP2-201ENST00000424643 ZBTB22O15209 634 aa12.61□□□□□ -0.39
SDCBPP2-201ENST00000424643 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
SDCBPP2-201ENST00000424643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.57□□□□□ -0.4
SDCBPP2-201ENST00000424643 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
SDCBPP2-201ENST00000424643 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
SDCBPP2-201ENST00000424643 TRHP20396 242 aaPredicted RBP12.51□□□□□ -0.41
SDCBPP2-201ENST00000424643 APLP2Q06481 763 aa12.49□□□□□ -0.41
SDCBPP2-201ENST00000424643 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
SDCBPP2-201ENST00000424643 ABCB7O75027 752 aa12.45□□□□□ -0.42
SDCBPP2-201ENST00000424643 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
SDCBPP2-201ENST00000424643 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
SDCBPP2-201ENST00000424643 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
SDCBPP2-201ENST00000424643 POLA2Q14181 598 aa12.22□□□□□ -0.45
SDCBPP2-201ENST00000424643 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
SDCBPP2-201ENST00000424643 RBM42Q9BTD8 480 aaKnown RBP12.19□□□□□ -0.46
SDCBPP2-201ENST00000424643 CHRDL2Q6WN34 429 aa12.04□□□□□ -0.48
SDCBPP2-201ENST00000424643 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
SDCBPP2-201ENST00000424643 AKT1S1Q96B36 256 aa11.86□□□□□ -0.51
SDCBPP2-201ENST00000424643 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
SDCBPP2-201ENST00000424643 FBLN2P98095 1184 aa11.79□□□□□ -0.52
SDCBPP2-201ENST00000424643 MKRN4PQ13434 485 aaPredicted RBP11.78□□□□□ -0.52
SDCBPP2-201ENST00000424643 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
SDCBPP2-201ENST00000424643 SP7Q8TDD2 431 aaPredicted RBP11.75□□□□□ -0.53
SDCBPP2-201ENST00000424643 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
SDCBPP2-201ENST00000424643 PITPNM1O00562 1244 aa11.61□□□□□ -0.55
SDCBPP2-201ENST00000424643 SPDYE2BA6NHP3 402 aa11.59□□□□□ -0.55
SDCBPP2-201ENST00000424643 SPDYE6P0CI01 402 aa11.59□□□□□ -0.55
SDCBPP2-201ENST00000424643 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
SDCBPP2-201ENST00000424643 SPDYE2Q495Y8 402 aa11.59□□□□□ -0.55
SDCBPP2-201ENST00000424643 HAX1O00165 279 aa11.57□□□□□ -0.56
SDCBPP2-201ENST00000424643 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
SDCBPP2-201ENST00000424643 SSUH2Q9Y2M2 353 aa11.47□□□□□ -0.57
SDCBPP2-201ENST00000424643 EVX2Q03828 476 aa11.42□□□□□ -0.58
SDCBPP2-201ENST00000424643 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
SDCBPP2-201ENST00000424643 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
SDCBPP2-201ENST00000424643 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
SDCBPP2-201ENST00000424643 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
SDCBPP2-201ENST00000424643 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
SDCBPP2-201ENST00000424643 C19orf67A6NJJ6 358 aa11.22□□□□□ -0.61
SDCBPP2-201ENST00000424643 PRR29P0C7W0 189 aa11.17□□□□□ -0.62
SDCBPP2-201ENST00000424643 FKBP8Q14318 412 aa11.15□□□□□ -0.62
SDCBPP2-201ENST00000424643 GABBR2O75899 941 aa11.14□□□□□ -0.63
SDCBPP2-201ENST00000424643 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
SDCBPP2-201ENST00000424643 PROM2Q8N271 834 aa11.1□□□□□ -0.63
SDCBPP2-201ENST00000424643 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
SDCBPP2-201ENST00000424643 LHX8Q68G74 356 aa11.02□□□□□ -0.65
SDCBPP2-201ENST00000424643 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
SDCBPP2-201ENST00000424643 CD44P16070 742 aaKnown RBP10.94□□□□□ -0.66
SDCBPP2-201ENST00000424643 FARP1Q9Y4F1 1045 aaPredicted RBP10.94□□□□□ -0.66
SDCBPP2-201ENST00000424643 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
SDCBPP2-201ENST00000424643 CLCN6P51797 869 aa10.85□□□□□ -0.67
SDCBPP2-201ENST00000424643 MIER1Q8N108 512 aa10.84□□□□□ -0.67
SDCBPP2-201ENST00000424643 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
SDCBPP2-201ENST00000424643 PLCD3Q8N3E9 789 aa10.78□□□□□ -0.68
SDCBPP2-201ENST00000424643 DCBLD2Q96PD2 775 aa10.77□□□□□ -0.69
SDCBPP2-201ENST00000424643 FBXO3Q9UK99 471 aa10.77□□□□□ -0.69
SDCBPP2-201ENST00000424643 NPM1P06748 294 aaKnown RBP eCLIP10.75□□□□□ -0.69
SDCBPP2-201ENST00000424643 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
SDCBPP2-201ENST00000424643 ZRANB1Q9UGI0 708 aa10.75□□□□□ -0.69
SDCBPP2-201ENST00000424643 PLEKHG5O94827 1062 aa10.74□□□□□ -0.69
SDCBPP2-201ENST00000424643 GALR2O43603 387 aaPredicted RBP10.66□□□□□ -0.7
SDCBPP2-201ENST00000424643 VASPP50552 380 aaPredicted RBP10.66□□□□□ -0.7
SDCBPP2-201ENST00000424643 PAK3O75914 559 aaPredicted RBP10.64□□□□□ -0.71
SDCBPP2-201ENST00000424643 TSPYL2Q9H2G4 693 aaPredicted RBP10.63□□□□□ -0.71
SDCBPP2-201ENST00000424643 ZBTB47Q9UFB7 747 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms