RNA–Protein interactions for RNA: ENST00000424636.2

TRDMT1-204, Transcript of tRNA aspartic acid methyltransferase 1, humanhuman

TSL 5

Gene TRDMT1, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDMT1-204ENST00000424636 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
TRDMT1-204ENST00000424636 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
TRDMT1-204ENST00000424636 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
TRDMT1-204ENST00000424636 PHF23Q9BUL5 403 aaPredicted RBP22.67■■□□□ 1.22
TRDMT1-204ENST00000424636 FOXD1Q16676 465 aa21.53■■□□□ 1.04
TRDMT1-204ENST00000424636 POTEDQ86YR6 584 aa20.62■□□□□ 0.89
TRDMT1-204ENST00000424636 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
TRDMT1-204ENST00000424636 MSH5O43196 834 aa20.34■□□□□ 0.85
TRDMT1-204ENST00000424636 PIAS4Q8N2W9 510 aaPredicted RBP20■□□□□ 0.79
TRDMT1-204ENST00000424636 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
TRDMT1-204ENST00000424636 ADRA2BP18089 450 aa19.89■□□□□ 0.77
TRDMT1-204ENST00000424636 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
TRDMT1-204ENST00000424636 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.51
TRDMT1-204ENST00000424636 SCAF1Q9H7N4 1312 aaKnown RBP18.15■□□□□ 0.5
TRDMT1-204ENST00000424636 PPP4R3CPQ6ZMV5 832 aa17.85■□□□□ 0.45
TRDMT1-204ENST00000424636 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
TRDMT1-204ENST00000424636 CNKSR2Q8WXI2 1034 aa17.52■□□□□ 0.4
TRDMT1-204ENST00000424636 HOXD11P31277 338 aaPredicted RBP17.51■□□□□ 0.39
TRDMT1-204ENST00000424636 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
TRDMT1-204ENST00000424636 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
TRDMT1-204ENST00000424636 RNF39Q9H2S5 420 aa17.31■□□□□ 0.36
TRDMT1-204ENST00000424636 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
TRDMT1-204ENST00000424636 C1QBPQ07021 282 aaKnown RBP17.04■□□□□ 0.32
TRDMT1-204ENST00000424636 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
TRDMT1-204ENST00000424636 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
TRDMT1-204ENST00000424636 KCNA4P22459 653 aa16.63■□□□□ 0.25
TRDMT1-204ENST00000424636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRDMT1-204ENST00000424636 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
TRDMT1-204ENST00000424636 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
TRDMT1-204ENST00000424636 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
TRDMT1-204ENST00000424636 POTEHQ6S545 545 aa16.07■□□□□ 0.16
TRDMT1-204ENST00000424636 DSG3P32926 999 aa16.06■□□□□ 0.16
TRDMT1-204ENST00000424636 CAPN15O75808 1086 aa16.01■□□□□ 0.15
TRDMT1-204ENST00000424636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
TRDMT1-204ENST00000424636 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
TRDMT1-204ENST00000424636 APLP2Q06481 763 aa15.8■□□□□ 0.12
TRDMT1-204ENST00000424636 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
TRDMT1-204ENST00000424636 SAMD1Q6SPF0 538 aaPredicted RBP15.74■□□□□ 0.11
TRDMT1-204ENST00000424636 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
TRDMT1-204ENST00000424636 SLC4A1APQ9BWU0 796 aaKnown RBP15.66■□□□□ 0.1
TRDMT1-204ENST00000424636 ABCB7O75027 752 aa15.65■□□□□ 0.1
TRDMT1-204ENST00000424636 MYCNP04198 464 aaPredicted RBP15.65■□□□□ 0.1
TRDMT1-204ENST00000424636 FOXD4L1Q9NU39 408 aa15.5■□□□□ 0.07
TRDMT1-204ENST00000424636 POLA2Q14181 598 aa15.35■□□□□ 0.05
TRDMT1-204ENST00000424636 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
TRDMT1-204ENST00000424636 ZBTB22O15209 634 aa15.32■□□□□ 0.04
TRDMT1-204ENST00000424636 ATF5Q9Y2D1 282 aaPredicted RBP15.32■□□□□ 0.04
TRDMT1-204ENST00000424636 CHRDL2Q6WN34 429 aa15.17■□□□□ 0.02
TRDMT1-204ENST00000424636 ATXN8OSP0DMR3 200 aa15.03■□□□□ -0
TRDMT1-204ENST00000424636 ZBTB12Q9Y330 459 aaPredicted RBP15.03■□□□□ -0
TRDMT1-204ENST00000424636 AKT1S1Q96B36 256 aa14.89□□□□□ -0.03
TRDMT1-204ENST00000424636 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
TRDMT1-204ENST00000424636 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
TRDMT1-204ENST00000424636 REM2Q8IYK8 340 aaPredicted RBP14.74□□□□□ -0.05
TRDMT1-204ENST00000424636 PIP4P2Q8N4L2 257 aa14.71□□□□□ -0.05
TRDMT1-204ENST00000424636 FBLN2P98095 1184 aa14.65□□□□□ -0.06
TRDMT1-204ENST00000424636 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
TRDMT1-204ENST00000424636 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
TRDMT1-204ENST00000424636 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
TRDMT1-204ENST00000424636 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
TRDMT1-204ENST00000424636 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
TRDMT1-204ENST00000424636 PITPNM1O00562 1244 aa14.58□□□□□ -0.08
TRDMT1-204ENST00000424636 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRDMT1-204ENST00000424636 HAX1O00165 279 aa14.54□□□□□ -0.08
TRDMT1-204ENST00000424636 SSUH2Q9Y2M2 353 aa14.43□□□□□ -0.1
TRDMT1-204ENST00000424636 ZNF692Q9BU19 519 aaPredicted RBP14.39□□□□□ -0.11
TRDMT1-204ENST00000424636 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
TRDMT1-204ENST00000424636 EVX2Q03828 476 aa14.33□□□□□ -0.12
TRDMT1-204ENST00000424636 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
TRDMT1-204ENST00000424636 CLEC11AQ9Y240 323 aa14.26□□□□□ -0.13
TRDMT1-204ENST00000424636 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
TRDMT1-204ENST00000424636 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRDMT1-204ENST00000424636 C19orf67A6NJJ6 358 aa14.11□□□□□ -0.15
TRDMT1-204ENST00000424636 PRR29P0C7W0 189 aa14.04□□□□□ -0.16
TRDMT1-204ENST00000424636 CHADLQ6NUI6 762 aa14.03□□□□□ -0.16
TRDMT1-204ENST00000424636 GABBR2O75899 941 aa14.01□□□□□ -0.17
TRDMT1-204ENST00000424636 LHX8Q68G74 356 aa13.91□□□□□ -0.18
TRDMT1-204ENST00000424636 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
TRDMT1-204ENST00000424636 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
TRDMT1-204ENST00000424636 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
TRDMT1-204ENST00000424636 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
TRDMT1-204ENST00000424636 CD44P16070 742 aaKnown RBP13.73□□□□□ -0.21
TRDMT1-204ENST00000424636 POTEIP0CG38 1075 aa13.71□□□□□ -0.21
TRDMT1-204ENST00000424636 CLCN6P51797 869 aa13.67□□□□□ -0.22
TRDMT1-204ENST00000424636 PROM2Q8N271 834 aa13.63□□□□□ -0.23
TRDMT1-204ENST00000424636 ZNF579Q8NAF0 562 aaKnown RBP13.55□□□□□ -0.24
TRDMT1-204ENST00000424636 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
TRDMT1-204ENST00000424636 ZRANB1Q9UGI0 708 aa13.53□□□□□ -0.24
TRDMT1-204ENST00000424636 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
TRDMT1-204ENST00000424636 NPM1P06748 294 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRDMT1-204ENST00000424636 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
TRDMT1-204ENST00000424636 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
TRDMT1-204ENST00000424636 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
TRDMT1-204ENST00000424636 PLSCR2Q9NRY7 297 aa13.36□□□□□ -0.27
TRDMT1-204ENST00000424636 OTUD5Q96G74 571 aa13.29□□□□□ -0.28
TRDMT1-204ENST00000424636 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
TRDMT1-204ENST00000424636 MIER1Q8N108 512 aa13.22□□□□□ -0.29
TRDMT1-204ENST00000424636 FKBP8Q14318 412 aa13.2□□□□□ -0.3
TRDMT1-204ENST00000424636 TSPYL2Q9H2G4 693 aaPredicted RBP13.2□□□□□ -0.3
TRDMT1-204ENST00000424636 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms