RNA–Protein interactions for RNA: ENST00000424431.3

C9orf57-202, Transcript of chromosome 9 open reading frame 57, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf57, Length 1,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf57-202ENST00000424431 AEBP2Q6ZN18 517 aaPredicted RBP27.67■■■□□ 2.02
C9orf57-202ENST00000424431 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
C9orf57-202ENST00000424431 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
C9orf57-202ENST00000424431 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
C9orf57-202ENST00000424431 FOXD1Q16676 465 aa21.89■■□□□ 1.09
C9orf57-202ENST00000424431 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
C9orf57-202ENST00000424431 PPP6R1Q9UPN7 881 aa20.75■□□□□ 0.91
C9orf57-202ENST00000424431 ADRA2BP18089 450 aa20.7■□□□□ 0.9
C9orf57-202ENST00000424431 PIAS4Q8N2W9 510 aaPredicted RBP20.52■□□□□ 0.88
C9orf57-202ENST00000424431 MSH5O43196 834 aa20.3■□□□□ 0.84
C9orf57-202ENST00000424431 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
C9orf57-202ENST00000424431 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
C9orf57-202ENST00000424431 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
C9orf57-202ENST00000424431 PPP4R3CPQ6ZMV5 832 aa18.76■□□□□ 0.59
C9orf57-202ENST00000424431 DMRT2Q9Y5R5 561 aa18.68■□□□□ 0.58
C9orf57-202ENST00000424431 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
C9orf57-202ENST00000424431 KCNA4P22459 653 aa18.11■□□□□ 0.49
C9orf57-202ENST00000424431 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
C9orf57-202ENST00000424431 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
C9orf57-202ENST00000424431 RNF216Q9NWF9 866 aaPredicted RBP18.06■□□□□ 0.48
C9orf57-202ENST00000424431 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
C9orf57-202ENST00000424431 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
C9orf57-202ENST00000424431 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
C9orf57-202ENST00000424431 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
C9orf57-202ENST00000424431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.36
C9orf57-202ENST00000424431 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
C9orf57-202ENST00000424431 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
C9orf57-202ENST00000424431 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
C9orf57-202ENST00000424431 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
C9orf57-202ENST00000424431 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
C9orf57-202ENST00000424431 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
C9orf57-202ENST00000424431 ZBTB22O15209 634 aa16.69■□□□□ 0.26
C9orf57-202ENST00000424431 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
C9orf57-202ENST00000424431 SPINK5Q9NQ38 1064 aaPredicted RBP16.65■□□□□ 0.26
C9orf57-202ENST00000424431 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
C9orf57-202ENST00000424431 CAPN15O75808 1086 aa16.57■□□□□ 0.24
C9orf57-202ENST00000424431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
C9orf57-202ENST00000424431 MYCNP04198 464 aaPredicted RBP16.51■□□□□ 0.23
C9orf57-202ENST00000424431 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
C9orf57-202ENST00000424431 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
C9orf57-202ENST00000424431 APLP2Q06481 763 aa16.42■□□□□ 0.22
C9orf57-202ENST00000424431 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
C9orf57-202ENST00000424431 DSG3P32926 999 aa16.4■□□□□ 0.22
C9orf57-202ENST00000424431 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
C9orf57-202ENST00000424431 ABCB7O75027 752 aa16.25■□□□□ 0.19
C9orf57-202ENST00000424431 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
C9orf57-202ENST00000424431 ATXN8OSP0DMR3 200 aa16.1■□□□□ 0.17
C9orf57-202ENST00000424431 POLA2Q14181 598 aa16.02■□□□□ 0.16
C9orf57-202ENST00000424431 ZBTB12Q9Y330 459 aaPredicted RBP15.65■□□□□ 0.1
C9orf57-202ENST00000424431 RBM42Q9BTD8 480 aaKnown RBP15.58■□□□□ 0.08
C9orf57-202ENST00000424431 OSCARQ8IYS5 282 aa15.51■□□□□ 0.07
C9orf57-202ENST00000424431 FBLN2P98095 1184 aa15.43■□□□□ 0.06
C9orf57-202ENST00000424431 MKRN4PQ13434 485 aaPredicted RBP15.43■□□□□ 0.06
C9orf57-202ENST00000424431 AKT1S1Q96B36 256 aa15.31■□□□□ 0.04
C9orf57-202ENST00000424431 SPDYE2BA6NHP3 402 aa15.22■□□□□ 0.03
C9orf57-202ENST00000424431 SPDYE6P0CI01 402 aa15.22■□□□□ 0.03
C9orf57-202ENST00000424431 SPDYE2Q495Y8 402 aa15.22■□□□□ 0.03
C9orf57-202ENST00000424431 POTEHQ6S545 545 aa15.2■□□□□ 0.02
C9orf57-202ENST00000424431 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
C9orf57-202ENST00000424431 CHRDL2Q6WN34 429 aa15.16■□□□□ 0.02
C9orf57-202ENST00000424431 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
C9orf57-202ENST00000424431 SSUH2Q9Y2M2 353 aa15.08■□□□□ 0
C9orf57-202ENST00000424431 PITPNM1O00562 1244 aa15.05■□□□□ -0
C9orf57-202ENST00000424431 FKBP8Q14318 412 aa14.96□□□□□ -0.01
C9orf57-202ENST00000424431 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
C9orf57-202ENST00000424431 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
C9orf57-202ENST00000424431 PIP4P2Q8N4L2 257 aa14.89□□□□□ -0.03
C9orf57-202ENST00000424431 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
C9orf57-202ENST00000424431 SPDYE1Q8NFV5 336 aaPredicted RBP14.88□□□□□ -0.03
C9orf57-202ENST00000424431 FXR2P51116 673 aaKnown RBP eCLIP14.83□□□□□ -0.04
C9orf57-202ENST00000424431 PROM2Q8N271 834 aa14.75□□□□□ -0.05
C9orf57-202ENST00000424431 PRR29P0C7W0 189 aa14.66□□□□□ -0.06
C9orf57-202ENST00000424431 PRKAR2AP13861 404 aaKnown RBP14.65□□□□□ -0.06
C9orf57-202ENST00000424431 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
C9orf57-202ENST00000424431 HAX1O00165 279 aa14.52□□□□□ -0.09
C9orf57-202ENST00000424431 STAG3Q9UJ98 1225 aa14.52□□□□□ -0.09
C9orf57-202ENST00000424431 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
C9orf57-202ENST00000424431 EVX2Q03828 476 aa14.41□□□□□ -0.1
C9orf57-202ENST00000424431 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
C9orf57-202ENST00000424431 SP7Q8TDD2 431 aaPredicted RBP14.39□□□□□ -0.11
C9orf57-202ENST00000424431 FARP1Q9Y4F1 1045 aaPredicted RBP14.37□□□□□ -0.11
C9orf57-202ENST00000424431 C19orf67A6NJJ6 358 aa14.34□□□□□ -0.11
C9orf57-202ENST00000424431 VASPP50552 380 aaPredicted RBP14.23□□□□□ -0.13
C9orf57-202ENST00000424431 CD44P16070 742 aaKnown RBP14.2□□□□□ -0.14
C9orf57-202ENST00000424431 MNX1P50219 401 aaPredicted RBP14.2□□□□□ -0.14
C9orf57-202ENST00000424431 MIER1Q8N108 512 aa14.16□□□□□ -0.14
C9orf57-202ENST00000424431 PLCD3Q8N3E9 789 aa14.12□□□□□ -0.15
C9orf57-202ENST00000424431 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
C9orf57-202ENST00000424431 GABBR2O75899 941 aa14.07□□□□□ -0.16
C9orf57-202ENST00000424431 IFNLR1Q8IU57 520 aaPredicted RBP14.07□□□□□ -0.16
C9orf57-202ENST00000424431 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
C9orf57-202ENST00000424431 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
C9orf57-202ENST00000424431 ZNF579Q8NAF0 562 aaKnown RBP13.98□□□□□ -0.17
C9orf57-202ENST00000424431 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
C9orf57-202ENST00000424431 ZBTB47Q9UFB7 747 aaPredicted RBP13.97□□□□□ -0.17
C9orf57-202ENST00000424431 KLHL34Q8N239 644 aa13.96□□□□□ -0.17
C9orf57-202ENST00000424431 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
C9orf57-202ENST00000424431 TSPYL2Q9H2G4 693 aaPredicted RBP13.91□□□□□ -0.18
C9orf57-202ENST00000424431 RASEFQ8IZ41 740 aa13.88□□□□□ -0.19
C9orf57-202ENST00000424431 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms