RNA–Protein interactions for RNA: ENST00000424017.1

AP000235.1-201, humanhuman

TSL 3 BASIC

Gene AP000235.1, Length 479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000235.1-201ENST00000424017 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
AP000235.1-201ENST00000424017 CHIC1Q5VXU3 224 aa15.83■□□□□ 0.12
AP000235.1-201ENST00000424017 SENP3Q9H4L4 574 aaPredicted RBP14.42□□□□□ -0.1
AP000235.1-201ENST00000424017 PHF23Q9BUL5 403 aaPredicted RBP14.2□□□□□ -0.14
AP000235.1-201ENST00000424017 FOXD1Q16676 465 aa13.41□□□□□ -0.26
AP000235.1-201ENST00000424017 MSH5O43196 834 aa12.66□□□□□ -0.38
AP000235.1-201ENST00000424017 PLPPR3Q6T4P5 718 aa12.65□□□□□ -0.38
AP000235.1-201ENST00000424017 PIAS4Q8N2W9 510 aaPredicted RBP12.57□□□□□ -0.4
AP000235.1-201ENST00000424017 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
AP000235.1-201ENST00000424017 ADRA2BP18089 450 aa12.42□□□□□ -0.42
AP000235.1-201ENST00000424017 PPP6R1Q9UPN7 881 aa12.41□□□□□ -0.42
AP000235.1-201ENST00000424017 SCAF1Q9H7N4 1312 aaKnown RBP11.45□□□□□ -0.58
AP000235.1-201ENST00000424017 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
AP000235.1-201ENST00000424017 DMRT2Q9Y5R5 561 aa11.37□□□□□ -0.59
AP000235.1-201ENST00000424017 DCAF8L1A6NGE4 600 aa11.08□□□□□ -0.64
AP000235.1-201ENST00000424017 PPP4R3CPQ6ZMV5 832 aa11.06□□□□□ -0.64
AP000235.1-201ENST00000424017 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
AP000235.1-201ENST00000424017 CNKSR2Q8WXI2 1034 aa10.88□□□□□ -0.67
AP000235.1-201ENST00000424017 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
AP000235.1-201ENST00000424017 RNF216Q9NWF9 866 aaPredicted RBP10.8□□□□□ -0.68
AP000235.1-201ENST00000424017 RNF39Q9H2S5 420 aa10.73□□□□□ -0.69
AP000235.1-201ENST00000424017 NCBP3Q53F19 620 aaKnown RBP10.66□□□□□ -0.7
AP000235.1-201ENST00000424017 C1QBPQ07021 282 aaKnown RBP10.61□□□□□ -0.71
AP000235.1-201ENST00000424017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.5□□□□□ -0.73
AP000235.1-201ENST00000424017 DNAJC5BQ9UF47 199 aa10.5□□□□□ -0.73
AP000235.1-201ENST00000424017 NPM3O75607 178 aaKnown RBP10.41□□□□□ -0.74
AP000235.1-201ENST00000424017 CAPN15O75808 1086 aa10.15□□□□□ -0.78
AP000235.1-201ENST00000424017 U3KPZ7 1027 aaPredicted RBP10.15□□□□□ -0.78
AP000235.1-201ENST00000424017 KCNA4P22459 653 aa10.1□□□□□ -0.79
AP000235.1-201ENST00000424017 SPINK5Q9NQ38 1064 aaPredicted RBP10.07□□□□□ -0.8
AP000235.1-201ENST00000424017 DSG3P32926 999 aa10.01□□□□□ -0.81
AP000235.1-201ENST00000424017 APLP2Q06481 763 aa9.99□□□□□ -0.81
AP000235.1-201ENST00000424017 TRHP20396 242 aaPredicted RBP9.96□□□□□ -0.82
AP000235.1-201ENST00000424017 SLC4A2P04920 1241 aa9.93□□□□□ -0.82
AP000235.1-201ENST00000424017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.92□□□□□ -0.82
AP000235.1-201ENST00000424017 HNRNPUL2Q1KMD3 747 aaKnown RBP9.92□□□□□ -0.82
AP000235.1-201ENST00000424017 ZNF219Q9P2Y4 722 aaPredicted RBP9.89□□□□□ -0.83
AP000235.1-201ENST00000424017 ABCB7O75027 752 aa9.87□□□□□ -0.83
AP000235.1-201ENST00000424017 POTEHQ6S545 545 aa9.84□□□□□ -0.83
AP000235.1-201ENST00000424017 SAMD1Q6SPF0 538 aaPredicted RBP9.83□□□□□ -0.84
AP000235.1-201ENST00000424017 MYCNP04198 464 aaPredicted RBP9.67□□□□□ -0.86
AP000235.1-201ENST00000424017 RBM42Q9BTD8 480 aaKnown RBP9.64□□□□□ -0.87
AP000235.1-201ENST00000424017 POLA2Q14181 598 aa9.62□□□□□ -0.87
AP000235.1-201ENST00000424017 SLC4A1APQ9BWU0 796 aaKnown RBP9.56□□□□□ -0.88
AP000235.1-201ENST00000424017 FOXD4L1Q9NU39 408 aa9.48□□□□□ -0.89
AP000235.1-201ENST00000424017 CHRDL2Q6WN34 429 aa9.45□□□□□ -0.9
AP000235.1-201ENST00000424017 ZBTB12Q9Y330 459 aaPredicted RBP9.44□□□□□ -0.9
AP000235.1-201ENST00000424017 ATF5Q9Y2D1 282 aaPredicted RBP9.4□□□□□ -0.9
AP000235.1-201ENST00000424017 AKT1S1Q96B36 256 aa9.35□□□□□ -0.91
AP000235.1-201ENST00000424017 OSCARQ8IYS5 282 aa9.29□□□□□ -0.92
AP000235.1-201ENST00000424017 REM2Q8IYK8 340 aaPredicted RBP9.26□□□□□ -0.93
AP000235.1-201ENST00000424017 ZBTB22O15209 634 aa9.21□□□□□ -0.94
AP000235.1-201ENST00000424017 ATXN8OSP0DMR3 200 aa9.19□□□□□ -0.94
AP000235.1-201ENST00000424017 FBLN2P98095 1184 aa9.17□□□□□ -0.94
AP000235.1-201ENST00000424017 PIP4P2Q8N4L2 257 aa9.17□□□□□ -0.94
AP000235.1-201ENST00000424017 PITPNM1O00562 1244 aa9.15□□□□□ -0.94
AP000235.1-201ENST00000424017 SP7Q8TDD2 431 aaPredicted RBP9.15□□□□□ -0.94
AP000235.1-201ENST00000424017 HAX1O00165 279 aa9.14□□□□□ -0.95
AP000235.1-201ENST00000424017 SPDYE2BA6NHP3 402 aa9.09□□□□□ -0.95
AP000235.1-201ENST00000424017 SPDYE6P0CI01 402 aa9.09□□□□□ -0.95
AP000235.1-201ENST00000424017 SPDYE2Q495Y8 402 aa9.09□□□□□ -0.95
AP000235.1-201ENST00000424017 FXR2P51116 673 aaKnown RBP eCLIP9.06□□□□□ -0.96
AP000235.1-201ENST00000424017 CLEC11AQ9Y240 323 aa9.05□□□□□ -0.96
AP000235.1-201ENST00000424017 ZNF692Q9BU19 519 aaPredicted RBP9.01□□□□□ -0.97
AP000235.1-201ENST00000424017 SPDYE1Q8NFV5 336 aaPredicted RBP9□□□□□ -0.97
AP000235.1-201ENST00000424017 PRKAR2AP13861 404 aaKnown RBP8.96□□□□□ -0.98
AP000235.1-201ENST00000424017 MKRN4PQ13434 485 aaPredicted RBP8.94□□□□□ -0.98
AP000235.1-201ENST00000424017 SSUH2Q9Y2M2 353 aa8.89□□□□□ -0.99
AP000235.1-201ENST00000424017 EVX2Q03828 476 aa8.88□□□□□ -0.99
AP000235.1-201ENST00000424017 PRR29P0C7W0 189 aa8.85□□□□□ -0.99
AP000235.1-201ENST00000424017 PABPN1Q86U42 306 aaKnown RBP eCLIP8.85□□□□□ -0.99
AP000235.1-201ENST00000424017 CHADLQ6NUI6 762 aa8.82□□□□□ -1
AP000235.1-201ENST00000424017 C19orf67A6NJJ6 358 aa8.79□□□□□ -1
AP000235.1-201ENST00000424017 GABBR2O75899 941 aa8.72□□□□□ -1.01
AP000235.1-201ENST00000424017 CSRNP3Q8WYN3 585 aa8.7□□□□□ -1.02
AP000235.1-201ENST00000424017 CD44P16070 742 aaKnown RBP8.67□□□□□ -1.02
AP000235.1-201ENST00000424017 FARP1Q9Y4F1 1045 aaPredicted RBP8.66□□□□□ -1.02
AP000235.1-201ENST00000424017 EHMT2Q96KQ7 1210 aa8.64□□□□□ -1.03
AP000235.1-201ENST00000424017 LHX8Q68G74 356 aa8.61□□□□□ -1.03
AP000235.1-201ENST00000424017 STAG3Q9UJ98 1225 aa8.6□□□□□ -1.03
AP000235.1-201ENST00000424017 CLCN6P51797 869 aa8.56□□□□□ -1.04
AP000235.1-201ENST00000424017 DCBLD2Q96PD2 775 aa8.56□□□□□ -1.04
AP000235.1-201ENST00000424017 SPDYE4A6NLX3 237 aa8.55□□□□□ -1.04
AP000235.1-201ENST00000424017 ZRANB1Q9UGI0 708 aa8.54□□□□□ -1.04
AP000235.1-201ENST00000424017 PAK3O75914 559 aaPredicted RBP8.51□□□□□ -1.05
AP000235.1-201ENST00000424017 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
AP000235.1-201ENST00000424017 POTEIP0CG38 1075 aa8.47□□□□□ -1.05
AP000235.1-201ENST00000424017 ZNF579Q8NAF0 562 aaKnown RBP8.47□□□□□ -1.05
AP000235.1-201ENST00000424017 NPM1P06748 294 aaKnown RBP eCLIP8.45□□□□□ -1.06
AP000235.1-201ENST00000424017 GALR2O43603 387 aaPredicted RBP8.39□□□□□ -1.07
AP000235.1-201ENST00000424017 PHF12Q96QT6 1004 aa8.38□□□□□ -1.07
AP000235.1-201ENST00000424017 PLEKHG5O94827 1062 aa8.29□□□□□ -1.08
AP000235.1-201ENST00000424017 MNX1P50219 401 aaPredicted RBP8.29□□□□□ -1.08
AP000235.1-201ENST00000424017 TSPYL2Q9H2G4 693 aaPredicted RBP8.29□□□□□ -1.08
AP000235.1-201ENST00000424017 PLSCR2Q9NRY7 297 aa8.26□□□□□ -1.09
AP000235.1-201ENST00000424017 MIER1Q8N108 512 aa8.24□□□□□ -1.09
AP000235.1-201ENST00000424017 MS4A3Q96HJ5 214 aa8.24□□□□□ -1.09
AP000235.1-201ENST00000424017 OTUD5Q96G74 571 aa8.22□□□□□ -1.09
AP000235.1-201ENST00000424017 PELP1Q8IZL8 1130 aaKnown RBP8.21□□□□□ -1.1
AP000235.1-201ENST00000424017 METRNQ9UJH8 293 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms