RNA–Protein interactions for RNA: ENST00000423725.5

NDUFS1-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S1, humanhuman

TSL 2 BASIC

Gene NDUFS1, Length 2,631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS1-202ENST00000423725 NISCHQ9Y2I1 1504 aa19.98■□□□□ 0.79
NDUFS1-202ENST00000423725 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
NDUFS1-202ENST00000423725 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
NDUFS1-202ENST00000423725 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
NDUFS1-202ENST00000423725 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
NDUFS1-202ENST00000423725 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
NDUFS1-202ENST00000423725 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
NDUFS1-202ENST00000423725 CHIC1Q5VXU3 224 aa16.27■□□□□ 0.19
NDUFS1-202ENST00000423725 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
NDUFS1-202ENST00000423725 SCRIBQ14160 1630 aa15.98■□□□□ 0.15
NDUFS1-202ENST00000423725 ABCC9O60706 1549 aa15.9■□□□□ 0.14
NDUFS1-202ENST00000423725 LOC105371045A0A1W2PR82 267 aa15.87■□□□□ 0.13
NDUFS1-202ENST00000423725 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
NDUFS1-202ENST00000423725 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
NDUFS1-202ENST00000423725 CECR2Q9BXF3 1484 aa15.69■□□□□ 0.1
NDUFS1-202ENST00000423725 NACADO15069 1562 aa15.68■□□□□ 0.1
NDUFS1-202ENST00000423725 RB1CC1Q8TDY2 1594 aa15.67■□□□□ 0.1
NDUFS1-202ENST00000423725 HRCP23327 699 aa15.63■□□□□ 0.09
NDUFS1-202ENST00000423725 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
NDUFS1-202ENST00000423725 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
NDUFS1-202ENST00000423725 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
NDUFS1-202ENST00000423725 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
NDUFS1-202ENST00000423725 WIZO95785 1651 aa15.49■□□□□ 0.07
NDUFS1-202ENST00000423725 PPARGC1BQ86YN6 1023 aaKnown RBP15.46■□□□□ 0.06
NDUFS1-202ENST00000423725 TRIM26Q12899 539 aaPredicted RBP15.37■□□□□ 0.05
NDUFS1-202ENST00000423725 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
NDUFS1-202ENST00000423725 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
NDUFS1-202ENST00000423725 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
NDUFS1-202ENST00000423725 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
NDUFS1-202ENST00000423725 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
NDUFS1-202ENST00000423725 CCDC88BA6NC98 1476 aa15.19■□□□□ 0.02
NDUFS1-202ENST00000423725 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
NDUFS1-202ENST00000423725 ABCC8Q09428 1581 aa15.17■□□□□ 0.02
NDUFS1-202ENST00000423725 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
NDUFS1-202ENST00000423725 BICRAQ9NZM4 1560 aa15.1■□□□□ 0.01
NDUFS1-202ENST00000423725 SOGA1O94964 1423 aa15.04■□□□□ -0
NDUFS1-202ENST00000423725 RUSC2Q8N2Y8 1516 aa14.98□□□□□ -0.01
NDUFS1-202ENST00000423725 TTBK1Q5TCY1 1321 aaPredicted RBP14.97□□□□□ -0.01
NDUFS1-202ENST00000423725 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
NDUFS1-202ENST00000423725 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
NDUFS1-202ENST00000423725 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
NDUFS1-202ENST00000423725 CEP162Q5TB80 1403 aa14.88□□□□□ -0.03
NDUFS1-202ENST00000423725 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
NDUFS1-202ENST00000423725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
NDUFS1-202ENST00000423725 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
NDUFS1-202ENST00000423725 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
NDUFS1-202ENST00000423725 TNIKQ9UKE5 1360 aa14.82□□□□□ -0.04
NDUFS1-202ENST00000423725 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
NDUFS1-202ENST00000423725 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
NDUFS1-202ENST00000423725 EEA1Q15075 1411 aa14.77□□□□□ -0.04
NDUFS1-202ENST00000423725 CCER1Q8TC90 406 aaPredicted RBP14.77□□□□□ -0.05
NDUFS1-202ENST00000423725 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
NDUFS1-202ENST00000423725 RANGAP1P46060 587 aaPredicted RBP14.71□□□□□ -0.05
NDUFS1-202ENST00000423725 CEP164Q9UPV0 1460 aa14.65□□□□□ -0.06
NDUFS1-202ENST00000423725 RAPGEF2Q9Y4G8 1499 aa14.64□□□□□ -0.07
NDUFS1-202ENST00000423725 CLIP1P30622 1438 aa14.61□□□□□ -0.07
NDUFS1-202ENST00000423725 KIF21BO75037 1637 aa14.59□□□□□ -0.07
NDUFS1-202ENST00000423725 TOP2BQ02880 1626 aa14.57□□□□□ -0.08
NDUFS1-202ENST00000423725 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
NDUFS1-202ENST00000423725 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
NDUFS1-202ENST00000423725 VPS8Q8N3P4 1428 aa14.51□□□□□ -0.09
NDUFS1-202ENST00000423725 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
NDUFS1-202ENST00000423725 CUX1P39880 1505 aa14.49□□□□□ -0.09
NDUFS1-202ENST00000423725 BIVM-ERCC5R4GMW8 1640 aa14.48□□□□□ -0.09
NDUFS1-202ENST00000423725 APLP2Q06481 763 aa14.46□□□□□ -0.09
NDUFS1-202ENST00000423725 CFTRP13569 1480 aa14.45□□□□□ -0.1
NDUFS1-202ENST00000423725 PRXQ9BXM0 1461 aa14.45□□□□□ -0.1
NDUFS1-202ENST00000423725 DIEXFQ68CQ4 756 aaKnown RBP14.44□□□□□ -0.1
NDUFS1-202ENST00000423725 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
NDUFS1-202ENST00000423725 KANK4Q5T7N3 995 aaPredicted RBP14.4□□□□□ -0.1
NDUFS1-202ENST00000423725 KIF27Q86VH2 1401 aa14.38□□□□□ -0.11
NDUFS1-202ENST00000423725 ARAP1Q96P48 1450 aa14.37□□□□□ -0.11
NDUFS1-202ENST00000423725 ERICH3Q5RHP9 1530 aa14.37□□□□□ -0.11
NDUFS1-202ENST00000423725 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
NDUFS1-202ENST00000423725 ZNF316A6NFI3 1004 aaPredicted RBP14.31□□□□□ -0.12
NDUFS1-202ENST00000423725 NEUROD1Q13562 356 aa14.3□□□□□ -0.12
NDUFS1-202ENST00000423725 CUX2O14529 1486 aa14.3□□□□□ -0.12
NDUFS1-202ENST00000423725 IGF1RP08069 1367 aa14.3□□□□□ -0.12
NDUFS1-202ENST00000423725 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
NDUFS1-202ENST00000423725 CC2D2AQ9P2K1 1620 aa14.25□□□□□ -0.13
NDUFS1-202ENST00000423725 ACIN1Q9UKV3 1341 aaKnown RBP14.25□□□□□ -0.13
NDUFS1-202ENST00000423725 FGD5Q6ZNL6 1462 aa14.25□□□□□ -0.13
NDUFS1-202ENST00000423725 ITGAEP38570 1179 aa14.22□□□□□ -0.13
NDUFS1-202ENST00000423725 CARMIL1Q5VZK9 1371 aa14.21□□□□□ -0.13
NDUFS1-202ENST00000423725 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
NDUFS1-202ENST00000423725 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
NDUFS1-202ENST00000423725 DHX57Q6P158 1386 aaKnown RBP14.19□□□□□ -0.14
NDUFS1-202ENST00000423725 FANCD2Q9BXW9 1451 aa14.18□□□□□ -0.14
NDUFS1-202ENST00000423725 MIER1Q8N108 512 aa14.18□□□□□ -0.14
NDUFS1-202ENST00000423725 NESP48681 1621 aa14.18□□□□□ -0.14
NDUFS1-202ENST00000423725 YTHDC1Q96MU7 727 aaKnown RBP14.16□□□□□ -0.14
NDUFS1-202ENST00000423725 RAD54L2Q9Y4B4 1467 aa14.16□□□□□ -0.14
NDUFS1-202ENST00000423725 RRBP1Q9P2E9 1410 aaKnown RBP14.16□□□□□ -0.14
NDUFS1-202ENST00000423725 CCNB3Q8WWL7 1395 aa14.14□□□□□ -0.15
NDUFS1-202ENST00000423725 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
NDUFS1-202ENST00000423725 GTF3C3Q9Y5Q9 886 aa14.13□□□□□ -0.15
NDUFS1-202ENST00000423725 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
NDUFS1-202ENST00000423725 CENPBP07199 599 aaPredicted RBP14.11□□□□□ -0.15
NDUFS1-202ENST00000423725 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
NDUFS1-202ENST00000423725 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms