RNA–Protein interactions for RNA: ENST00000422697.1

AC004415.1-201, humanhuman

TSL 3 BASIC

Gene AC004415.1, Length 449 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004415.1-201ENST00000422697 AEBP2Q6ZN18 517 aaPredicted RBP24.29■■□□□ 1.48
AC004415.1-201ENST00000422697 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
AC004415.1-201ENST00000422697 PHF23Q9BUL5 403 aaPredicted RBP20.81■□□□□ 0.92
AC004415.1-201ENST00000422697 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
AC004415.1-201ENST00000422697 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
AC004415.1-201ENST00000422697 FOXD1Q16676 465 aa19.14■□□□□ 0.65
AC004415.1-201ENST00000422697 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
AC004415.1-201ENST00000422697 ADRA2BP18089 450 aa18.33■□□□□ 0.52
AC004415.1-201ENST00000422697 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
AC004415.1-201ENST00000422697 MSH5O43196 834 aa17.69■□□□□ 0.42
AC004415.1-201ENST00000422697 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
AC004415.1-201ENST00000422697 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
AC004415.1-201ENST00000422697 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
AC004415.1-201ENST00000422697 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
AC004415.1-201ENST00000422697 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
AC004415.1-201ENST00000422697 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
AC004415.1-201ENST00000422697 KCNA4P22459 653 aa16.43■□□□□ 0.22
AC004415.1-201ENST00000422697 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
AC004415.1-201ENST00000422697 POTEDQ86YR6 584 aa16.19■□□□□ 0.18
AC004415.1-201ENST00000422697 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
AC004415.1-201ENST00000422697 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
AC004415.1-201ENST00000422697 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
AC004415.1-201ENST00000422697 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
AC004415.1-201ENST00000422697 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
AC004415.1-201ENST00000422697 SLC4A2P04920 1241 aa15.32■□□□□ 0.04
AC004415.1-201ENST00000422697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.3■□□□□ 0.04
AC004415.1-201ENST00000422697 RNF39Q9H2S5 420 aa15.16■□□□□ 0.02
AC004415.1-201ENST00000422697 FOXD4L1Q9NU39 408 aa15.15■□□□□ 0.02
AC004415.1-201ENST00000422697 ZBTB22O15209 634 aa15.13■□□□□ 0.01
AC004415.1-201ENST00000422697 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
AC004415.1-201ENST00000422697 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
AC004415.1-201ENST00000422697 CSRNP3Q8WYN3 585 aa15□□□□□ -0.01
AC004415.1-201ENST00000422697 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
AC004415.1-201ENST00000422697 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
AC004415.1-201ENST00000422697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
AC004415.1-201ENST00000422697 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
AC004415.1-201ENST00000422697 SAMD1Q6SPF0 538 aaPredicted RBP14.82□□□□□ -0.04
AC004415.1-201ENST00000422697 CACNB1Q02641 598 aaPredicted RBP14.76□□□□□ -0.05
AC004415.1-201ENST00000422697 APLP2Q06481 763 aa14.73□□□□□ -0.05
AC004415.1-201ENST00000422697 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
AC004415.1-201ENST00000422697 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
AC004415.1-201ENST00000422697 CAPN15O75808 1086 aa14.58□□□□□ -0.08
AC004415.1-201ENST00000422697 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
AC004415.1-201ENST00000422697 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
AC004415.1-201ENST00000422697 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
AC004415.1-201ENST00000422697 DSG3P32926 999 aa14.39□□□□□ -0.11
AC004415.1-201ENST00000422697 ABCB7O75027 752 aa14.29□□□□□ -0.12
AC004415.1-201ENST00000422697 POLA2Q14181 598 aa14.27□□□□□ -0.13
AC004415.1-201ENST00000422697 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
AC004415.1-201ENST00000422697 FBLN2P98095 1184 aa13.96□□□□□ -0.17
AC004415.1-201ENST00000422697 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
AC004415.1-201ENST00000422697 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
AC004415.1-201ENST00000422697 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
AC004415.1-201ENST00000422697 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
AC004415.1-201ENST00000422697 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
AC004415.1-201ENST00000422697 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
AC004415.1-201ENST00000422697 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
AC004415.1-201ENST00000422697 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
AC004415.1-201ENST00000422697 SSUH2Q9Y2M2 353 aa13.57□□□□□ -0.24
AC004415.1-201ENST00000422697 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
AC004415.1-201ENST00000422697 FKBP8Q14318 412 aa13.53□□□□□ -0.24
AC004415.1-201ENST00000422697 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
AC004415.1-201ENST00000422697 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
AC004415.1-201ENST00000422697 PROM2Q8N271 834 aa13.4□□□□□ -0.26
AC004415.1-201ENST00000422697 SPDYE1Q8NFV5 336 aaPredicted RBP13.28□□□□□ -0.28
AC004415.1-201ENST00000422697 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
AC004415.1-201ENST00000422697 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
AC004415.1-201ENST00000422697 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
AC004415.1-201ENST00000422697 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
AC004415.1-201ENST00000422697 FBXO3Q9UK99 471 aa13.1□□□□□ -0.31
AC004415.1-201ENST00000422697 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
AC004415.1-201ENST00000422697 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
AC004415.1-201ENST00000422697 PIP4P2Q8N4L2 257 aa12.98□□□□□ -0.33
AC004415.1-201ENST00000422697 VASPP50552 380 aaPredicted RBP12.91□□□□□ -0.34
AC004415.1-201ENST00000422697 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
AC004415.1-201ENST00000422697 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.34
AC004415.1-201ENST00000422697 MIER1Q8N108 512 aa12.88□□□□□ -0.35
AC004415.1-201ENST00000422697 CHADLQ6NUI6 762 aa12.86□□□□□ -0.35
AC004415.1-201ENST00000422697 PLCD3Q8N3E9 789 aa12.84□□□□□ -0.35
AC004415.1-201ENST00000422697 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
AC004415.1-201ENST00000422697 POTEHQ6S545 545 aa12.8□□□□□ -0.36
AC004415.1-201ENST00000422697 MNX1P50219 401 aaPredicted RBP12.79□□□□□ -0.36
AC004415.1-201ENST00000422697 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
AC004415.1-201ENST00000422697 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
AC004415.1-201ENST00000422697 IFNLR1Q8IU57 520 aaPredicted RBP12.73□□□□□ -0.37
AC004415.1-201ENST00000422697 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
AC004415.1-201ENST00000422697 KLHL34Q8N239 644 aa12.67□□□□□ -0.38
AC004415.1-201ENST00000422697 NUBP1P53384 320 aa12.59□□□□□ -0.39
AC004415.1-201ENST00000422697 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
AC004415.1-201ENST00000422697 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
AC004415.1-201ENST00000422697 HAX1O00165 279 aa12.55□□□□□ -0.4
AC004415.1-201ENST00000422697 RASEFQ8IZ41 740 aa12.53□□□□□ -0.4
AC004415.1-201ENST00000422697 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
AC004415.1-201ENST00000422697 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
AC004415.1-201ENST00000422697 FAM212AQ96EL1 285 aa12.47□□□□□ -0.41
AC004415.1-201ENST00000422697 EVX2Q03828 476 aa12.46□□□□□ -0.41
AC004415.1-201ENST00000422697 TSPYL2Q9H2G4 693 aaPredicted RBP12.45□□□□□ -0.42
AC004415.1-201ENST00000422697 ZRANB1Q9UGI0 708 aa12.44□□□□□ -0.42
AC004415.1-201ENST00000422697 GSE1Q14687 1217 aa12.43□□□□□ -0.42
AC004415.1-201ENST00000422697 DCAF8Q5TAQ9 597 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms