RNA–Protein interactions for RNA: ENST00000422514.6

RPL23A-204, Transcript of ribosomal protein L23a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL23A, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-204ENST00000422514 AEBP2Q6ZN18 517 aaPredicted RBP39.09■■■■□ 3.85
RPL23A-204ENST00000422514 CHIC1Q5VXU3 224 aa37.93■■■■□ 3.66
RPL23A-204ENST00000422514 PHF23Q9BUL5 403 aaPredicted RBP33.34■■■□□ 2.93
RPL23A-204ENST00000422514 SENP3Q9H4L4 574 aaPredicted RBP33.17■■■□□ 2.9
RPL23A-204ENST00000422514 FOXD1Q16676 465 aa30.83■■■□□ 2.53
RPL23A-204ENST00000422514 PLPPR3Q6T4P5 718 aa30.67■■■□□ 2.5
RPL23A-204ENST00000422514 PPP6R1Q9UPN7 881 aa29.49■■■□□ 2.31
RPL23A-204ENST00000422514 ADRA2BP18089 450 aa29.42■■■□□ 2.3
RPL23A-204ENST00000422514 PIAS4Q8N2W9 510 aaPredicted RBP28.99■■■□□ 2.23
RPL23A-204ENST00000422514 MSH5O43196 834 aa28.5■■■□□ 2.15
RPL23A-204ENST00000422514 NISCHQ9Y2I1 1504 aa27.58■■■□□ 2.01
RPL23A-204ENST00000422514 PPP4R3CPQ6ZMV5 832 aa26.99■■□□□ 1.91
RPL23A-204ENST00000422514 SCAF1Q9H7N4 1312 aaKnown RBP26.88■■□□□ 1.89
RPL23A-204ENST00000422514 MAPK8IP2Q13387 824 aaPredicted RBP26.77■■□□□ 1.88
RPL23A-204ENST00000422514 DMRT2Q9Y5R5 561 aa26.46■■□□□ 1.83
RPL23A-204ENST00000422514 POTEDQ86YR6 584 aa26.39■■□□□ 1.82
RPL23A-204ENST00000422514 CNKSR2Q8WXI2 1034 aa26.29■■□□□ 1.8
RPL23A-204ENST00000422514 NCBP3Q53F19 620 aaKnown RBP26.18■■□□□ 1.78
RPL23A-204ENST00000422514 KCNA4P22459 653 aa26.12■■□□□ 1.77
RPL23A-204ENST00000422514 NPM3O75607 178 aaKnown RBP25.86■■□□□ 1.73
RPL23A-204ENST00000422514 RNF216Q9NWF9 866 aaPredicted RBP25.86■■□□□ 1.73
RPL23A-204ENST00000422514 HOXD11P31277 338 aaPredicted RBP25.83■■□□□ 1.73
RPL23A-204ENST00000422514 DCAF8L1A6NGE4 600 aa25.25■■□□□ 1.63
RPL23A-204ENST00000422514 DNAJC5BQ9UF47 199 aa25.19■■□□□ 1.62
RPL23A-204ENST00000422514 SLC4A1APQ9BWU0 796 aaKnown RBP24.8■■□□□ 1.56
RPL23A-204ENST00000422514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.54■■□□□ 1.527e-8■■□□□ 13.2
RPL23A-204ENST00000422514 SLC4A2P04920 1241 aa24.49■■□□□ 1.51
RPL23A-204ENST00000422514 RNF39Q9H2S5 420 aa24.42■■□□□ 1.5
RPL23A-204ENST00000422514 U3KPZ7 1027 aaPredicted RBP24.19■■□□□ 1.46
RPL23A-204ENST00000422514 C1QBPQ07021 282 aaKnown RBP24.1■■□□□ 1.45
RPL23A-204ENST00000422514 FOXD4L1Q9NU39 408 aa24.1■■□□□ 1.45
RPL23A-204ENST00000422514 ZBTB22O15209 634 aa24.05■■□□□ 1.44
RPL23A-204ENST00000422514 CACNB1Q02641 598 aaPredicted RBP23.91■■□□□ 1.42
RPL23A-204ENST00000422514 MYCNP04198 464 aaPredicted RBP23.88■■□□□ 1.41
RPL23A-204ENST00000422514 CCDC180Q9P1Z9 1646 aa23.85■■□□□ 1.41
RPL23A-204ENST00000422514 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
RPL23A-204ENST00000422514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.75■■□□□ 1.39
RPL23A-204ENST00000422514 HNRNPUL2Q1KMD3 747 aaKnown RBP23.75■■□□□ 1.39
RPL23A-204ENST00000422514 CSRNP3Q8WYN3 585 aa23.69■■□□□ 1.38
RPL23A-204ENST00000422514 SAMD1Q6SPF0 538 aaPredicted RBP23.66■■□□□ 1.38
RPL23A-204ENST00000422514 SPINK5Q9NQ38 1064 aaPredicted RBP23.57■■□□□ 1.36
RPL23A-204ENST00000422514 APLP2Q06481 763 aa23.54■■□□□ 1.36
RPL23A-204ENST00000422514 CAPN15O75808 1086 aa23.44■■□□□ 1.34
RPL23A-204ENST00000422514 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
RPL23A-204ENST00000422514 ZNF219Q9P2Y4 722 aaPredicted RBP23.29■■□□□ 1.32
RPL23A-204ENST00000422514 ATF5Q9Y2D1 282 aaPredicted RBP23.28■■□□□ 1.32
RPL23A-204ENST00000422514 ATXN8OSP0DMR3 200 aa23.27■■□□□ 1.32
RPL23A-204ENST00000422514 TRHP20396 242 aaPredicted RBP23.27■■□□□ 1.32
RPL23A-204ENST00000422514 DSG3P32926 999 aa23.16■■□□□ 1.3
RPL23A-204ENST00000422514 ABCB7O75027 752 aa22.99■■□□□ 1.27
RPL23A-204ENST00000422514 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
RPL23A-204ENST00000422514 POLA2Q14181 598 aa22.86■■□□□ 1.25
RPL23A-204ENST00000422514 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
RPL23A-204ENST00000422514 ZBTB12Q9Y330 459 aaPredicted RBP22.46■■□□□ 1.19
RPL23A-204ENST00000422514 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
RPL23A-204ENST00000422514 DCAF8L2P0C7V8 631 aa22.36■■□□□ 1.17
RPL23A-204ENST00000422514 MKRN4PQ13434 485 aaPredicted RBP22.27■■□□□ 1.16
RPL23A-204ENST00000422514 FBLN2P98095 1184 aa22.25■■□□□ 1.15
RPL23A-204ENST00000422514 SUPT5HO00267 1087 aaKnown RBP22.23■■□□□ 1.15
RPL23A-204ENST00000422514 OSCARQ8IYS5 282 aa22.12■■□□□ 1.13
RPL23A-204ENST00000422514 RBM42Q9BTD8 480 aaKnown RBP22.04■■□□□ 1.12
RPL23A-204ENST00000422514 NACADO15069 1562 aa22.04■■□□□ 1.12
RPL23A-204ENST00000422514 ABCC9O60706 1549 aa21.98■■□□□ 1.11
RPL23A-204ENST00000422514 SCRIBQ14160 1630 aa21.86■■□□□ 1.09
RPL23A-204ENST00000422514 SPDYE2BA6NHP3 402 aa21.86■■□□□ 1.09
RPL23A-204ENST00000422514 SPDYE6P0CI01 402 aa21.86■■□□□ 1.09
RPL23A-204ENST00000422514 SPDYE2Q495Y8 402 aa21.86■■□□□ 1.09
RPL23A-204ENST00000422514 AKT1S1Q96B36 256 aa21.73■■□□□ 1.07
RPL23A-204ENST00000422514 ZNF692Q9BU19 519 aaPredicted RBP21.71■■□□□ 1.07
RPL23A-204ENST00000422514 SSUH2Q9Y2M2 353 aa21.7■■□□□ 1.06
RPL23A-204ENST00000422514 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
RPL23A-204ENST00000422514 SPDYE4A6NLX3 237 aa21.61■■□□□ 1.05
RPL23A-204ENST00000422514 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
RPL23A-204ENST00000422514 SLC24A1O60721 1099 aa21.57■■□□□ 1.04
RPL23A-204ENST00000422514 REM2Q8IYK8 340 aaPredicted RBP21.53■■□□□ 1.04
RPL23A-204ENST00000422514 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
RPL23A-204ENST00000422514 FKBP8Q14318 412 aa21.4■■□□□ 1.02
RPL23A-204ENST00000422514 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
RPL23A-204ENST00000422514 PITPNM1O00562 1244 aa21.29■■□□□ 1
RPL23A-204ENST00000422514 PROM2Q8N271 834 aa21.28■■□□□ 1
RPL23A-204ENST00000422514 CECR2Q9BXF3 1484 aa21.27■■□□□ 1
RPL23A-204ENST00000422514 MROH2BQ7Z745 1585 aa21.27■■□□□ 1
RPL23A-204ENST00000422514 SPDYE1Q8NFV5 336 aaPredicted RBP21.25■□□□□ 0.99
RPL23A-204ENST00000422514 CHRDL2Q6WN34 429 aa21.23■□□□□ 0.99
RPL23A-204ENST00000422514 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
RPL23A-204ENST00000422514 CLEC11AQ9Y240 323 aa21.14■□□□□ 0.98
RPL23A-204ENST00000422514 RTN4Q9NQC3 1192 aaKnown RBP21.13■□□□□ 0.97
RPL23A-204ENST00000422514 WIZO95785 1651 aa21.12■□□□□ 0.97
RPL23A-204ENST00000422514 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
RPL23A-204ENST00000422514 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
RPL23A-204ENST00000422514 STAG3Q9UJ98 1225 aa21.01■□□□□ 0.95
RPL23A-204ENST00000422514 FXR2P51116 673 aaKnown RBP eCLIP20.95■□□□□ 0.94
RPL23A-204ENST00000422514 AMER1Q5JTC6 1135 aaPredicted RBP20.94■□□□□ 0.94
RPL23A-204ENST00000422514 TRIM41Q8WV44 630 aa20.94■□□□□ 0.94
RPL23A-204ENST00000422514 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
RPL23A-204ENST00000422514 PRR29P0C7W0 189 aa20.93■□□□□ 0.94
RPL23A-204ENST00000422514 PIP4P2Q8N4L2 257 aa20.93■□□□□ 0.94
RPL23A-204ENST00000422514 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
RPL23A-204ENST00000422514 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
RPL23A-204ENST00000422514 POTEHQ6S545 545 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms