RNA–Protein interactions for RNA: ENST00000422285.6

PDHA1-206, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDHA1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-206ENST00000422285 NISCHQ9Y2I1 1504 aa26.24■■□□□ 1.79
PDHA1-206ENST00000422285 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
PDHA1-206ENST00000422285 DCAF8L2P0C7V8 631 aa23.07■■□□□ 1.28
PDHA1-206ENST00000422285 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
PDHA1-206ENST00000422285 ZCCHC6Q5VYS8 1495 aaKnown RBP22.05■■□□□ 1.12
PDHA1-206ENST00000422285 CCDC180Q9P1Z9 1646 aa22■■□□□ 1.11
PDHA1-206ENST00000422285 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
PDHA1-206ENST00000422285 ABCC9O60706 1549 aa21.46■■□□□ 1.03
PDHA1-206ENST00000422285 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
PDHA1-206ENST00000422285 MYO15BQ96JP2 1530 aa21.29■■□□□ 1
PDHA1-206ENST00000422285 SCRIBQ14160 1630 aa21.28■■□□□ 1
PDHA1-206ENST00000422285 LOC105371045A0A1W2PR82 267 aa21.24■□□□□ 0.99
PDHA1-206ENST00000422285 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
PDHA1-206ENST00000422285 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
PDHA1-206ENST00000422285 PCGF6Q9BYE7 350 aa21.07■□□□□ 0.96
PDHA1-206ENST00000422285 TRIM41Q8WV44 630 aa20.92■□□□□ 0.94
PDHA1-206ENST00000422285 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
PDHA1-206ENST00000422285 CECR2Q9BXF3 1484 aa20.78■□□□□ 0.92
PDHA1-206ENST00000422285 PABPN1Q86U42 306 aaKnown RBP eCLIP20.76■□□□□ 0.912e-6■□□□□ 10.5
PDHA1-206ENST00000422285 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
PDHA1-206ENST00000422285 RB1CC1Q8TDY2 1594 aa20.65■□□□□ 0.9
PDHA1-206ENST00000422285 HRCP23327 699 aa20.63■□□□□ 0.89
PDHA1-206ENST00000422285 NACADO15069 1562 aa20.59■□□□□ 0.89
PDHA1-206ENST00000422285 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
PDHA1-206ENST00000422285 TTBK1Q5TCY1 1321 aaPredicted RBP20.54■□□□□ 0.88
PDHA1-206ENST00000422285 WIZO95785 1651 aa20.45■□□□□ 0.86
PDHA1-206ENST00000422285 TRIM26Q12899 539 aaPredicted RBP20.32■□□□□ 0.84
PDHA1-206ENST00000422285 RANGAP1P46060 587 aaPredicted RBP20.24■□□□□ 0.83
PDHA1-206ENST00000422285 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.82
PDHA1-206ENST00000422285 UBTFP17480 764 aaKnown RBP20.12■□□□□ 0.81
PDHA1-206ENST00000422285 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
PDHA1-206ENST00000422285 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
PDHA1-206ENST00000422285 UNC13AQ9UPW8 1703 aa20■□□□□ 0.79
PDHA1-206ENST00000422285 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
PDHA1-206ENST00000422285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.94■□□□□ 0.78
PDHA1-206ENST00000422285 SOGA1O94964 1423 aa19.93■□□□□ 0.78
PDHA1-206ENST00000422285 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
PDHA1-206ENST00000422285 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
PDHA1-206ENST00000422285 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
PDHA1-206ENST00000422285 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
PDHA1-206ENST00000422285 CCER1Q8TC90 406 aaPredicted RBP19.83■□□□□ 0.77
PDHA1-206ENST00000422285 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
PDHA1-206ENST00000422285 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
PDHA1-206ENST00000422285 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.74
PDHA1-206ENST00000422285 CEP162Q5TB80 1403 aa19.67■□□□□ 0.74
PDHA1-206ENST00000422285 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
PDHA1-206ENST00000422285 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
PDHA1-206ENST00000422285 ATAD2BQ9ULI0 1458 aa19.65■□□□□ 0.74
PDHA1-206ENST00000422285 EIF4G1Q04637 1599 aaKnown RBP19.63■□□□□ 0.73
PDHA1-206ENST00000422285 APLP2Q06481 763 aa19.6■□□□□ 0.73
PDHA1-206ENST00000422285 TNIKQ9UKE5 1360 aa19.48■□□□□ 0.71
PDHA1-206ENST00000422285 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
PDHA1-206ENST00000422285 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
PDHA1-206ENST00000422285 ATP1B4Q9UN42 357 aaPredicted RBP19.41■□□□□ 0.7
PDHA1-206ENST00000422285 ITGAEP38570 1179 aa19.4■□□□□ 0.7
PDHA1-206ENST00000422285 CLIP1P30622 1438 aa19.38■□□□□ 0.69
PDHA1-206ENST00000422285 RAPGEF2Q9Y4G8 1499 aa19.36■□□□□ 0.69
PDHA1-206ENST00000422285 EEA1Q15075 1411 aa19.36■□□□□ 0.69
PDHA1-206ENST00000422285 P3H3Q8IVL6 736 aa19.31■□□□□ 0.68
PDHA1-206ENST00000422285 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
PDHA1-206ENST00000422285 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
PDHA1-206ENST00000422285 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
PDHA1-206ENST00000422285 DIEXFQ68CQ4 756 aaKnown RBP19.18■□□□□ 0.66
PDHA1-206ENST00000422285 YTHDC1Q96MU7 727 aaKnown RBP19.18■□□□□ 0.66
PDHA1-206ENST00000422285 KANK4Q5T7N3 995 aaPredicted RBP19.17■□□□□ 0.66
PDHA1-206ENST00000422285 NCAPD3P42695 1498 aa19.14■□□□□ 0.65
PDHA1-206ENST00000422285 VPS8Q8N3P4 1428 aa19.1■□□□□ 0.65
PDHA1-206ENST00000422285 CUX1P39880 1505 aa19.1■□□□□ 0.65
PDHA1-206ENST00000422285 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
PDHA1-206ENST00000422285 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
PDHA1-206ENST00000422285 CUX2O14529 1486 aa19.08■□□□□ 0.64
PDHA1-206ENST00000422285 TOP2BQ02880 1626 aa19.07■□□□□ 0.64
PDHA1-206ENST00000422285 NEUROD1Q13562 356 aa19.03■□□□□ 0.64
PDHA1-206ENST00000422285 KIF21BO75037 1637 aa19.03■□□□□ 0.64
PDHA1-206ENST00000422285 CADPSQ9ULU8 1353 aa19■□□□□ 0.63
PDHA1-206ENST00000422285 CFTRP13569 1480 aa19■□□□□ 0.63
PDHA1-206ENST00000422285 FAM50AQ14320 339 aaKnown RBP18.99■□□□□ 0.63
PDHA1-206ENST00000422285 HMGXB3Q12766 1538 aa18.99■□□□□ 0.63
PDHA1-206ENST00000422285 NESP48681 1621 aa18.97■□□□□ 0.63
PDHA1-206ENST00000422285 ZNF316A6NFI3 1004 aaPredicted RBP18.96■□□□□ 0.63
PDHA1-206ENST00000422285 ARID3CA6NKF2 412 aa18.96■□□□□ 0.63
PDHA1-206ENST00000422285 CC2D2AQ9P2K1 1620 aa18.95■□□□□ 0.62
PDHA1-206ENST00000422285 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
PDHA1-206ENST00000422285 CARMIL1Q5VZK9 1371 aa18.92■□□□□ 0.62
PDHA1-206ENST00000422285 PRXQ9BXM0 1461 aa18.91■□□□□ 0.62
PDHA1-206ENST00000422285 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
PDHA1-206ENST00000422285 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
PDHA1-206ENST00000422285 ACIN1Q9UKV3 1341 aaKnown RBP18.9■□□□□ 0.62
PDHA1-206ENST00000422285 IGF1RP08069 1367 aa18.9■□□□□ 0.62
PDHA1-206ENST00000422285 GTF3C3Q9Y5Q9 886 aa18.88■□□□□ 0.61
PDHA1-206ENST00000422285 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
PDHA1-206ENST00000422285 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
PDHA1-206ENST00000422285 TDRD9Q8NDG6 1382 aaKnown RBP18.83■□□□□ 0.61
PDHA1-206ENST00000422285 MIER1Q8N108 512 aa18.82■□□□□ 0.6
PDHA1-206ENST00000422285 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
PDHA1-206ENST00000422285 ARHGAP35Q9NRY4 1499 aa18.8■□□□□ 0.6
PDHA1-206ENST00000422285 ERICH3Q5RHP9 1530 aa18.75■□□□□ 0.59
PDHA1-206ENST00000422285 FHOD3Q2V2M9 1422 aa18.75■□□□□ 0.59
PDHA1-206ENST00000422285 CCNB3Q8WWL7 1395 aa18.71■□□□□ 0.59
PDHA1-206ENST00000422285 HIRIP3Q9BW71 556 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms