RNA–Protein interactions for RNA: ENST00000422017.1

AC013401.1-202, humanhuman

TSL 2 BASIC

Gene AC013401.1, Length 626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013401.1-202ENST00000422017 AEBP2Q6ZN18 517 aaPredicted RBP33.46■■■□□ 2.95
AC013401.1-202ENST00000422017 CHIC1Q5VXU3 224 aa31.9■■■□□ 2.7
AC013401.1-202ENST00000422017 SENP3Q9H4L4 574 aaPredicted RBP28.48■■■□□ 2.15
AC013401.1-202ENST00000422017 PHF23Q9BUL5 403 aaPredicted RBP28.17■■■□□ 2.1
AC013401.1-202ENST00000422017 FOXD1Q16676 465 aa26.56■■□□□ 1.84
AC013401.1-202ENST00000422017 PLPPR3Q6T4P5 718 aa25.55■■□□□ 1.68
AC013401.1-202ENST00000422017 PPP6R1Q9UPN7 881 aa24.98■■□□□ 1.59
AC013401.1-202ENST00000422017 ADRA2BP18089 450 aa24.91■■□□□ 1.58
AC013401.1-202ENST00000422017 PIAS4Q8N2W9 510 aaPredicted RBP24.85■■□□□ 1.57
AC013401.1-202ENST00000422017 MSH5O43196 834 aa24.76■■□□□ 1.55
AC013401.1-202ENST00000422017 POTEDQ86YR6 584 aa23.93■■□□□ 1.42
AC013401.1-202ENST00000422017 MAPK8IP2Q13387 824 aaPredicted RBP22.84■■□□□ 1.25
AC013401.1-202ENST00000422017 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
AC013401.1-202ENST00000422017 DMRT2Q9Y5R5 561 aa22.62■■□□□ 1.21
AC013401.1-202ENST00000422017 PPP4R3CPQ6ZMV5 832 aa22.45■■□□□ 1.18
AC013401.1-202ENST00000422017 CNKSR2Q8WXI2 1034 aa21.97■■□□□ 1.11
AC013401.1-202ENST00000422017 HOXD11P31277 338 aaPredicted RBP21.85■■□□□ 1.09
AC013401.1-202ENST00000422017 DCAF8L1A6NGE4 600 aa21.72■■□□□ 1.07
AC013401.1-202ENST00000422017 RNF216Q9NWF9 866 aaPredicted RBP21.72■■□□□ 1.07
AC013401.1-202ENST00000422017 NCBP3Q53F19 620 aaKnown RBP21.61■■□□□ 1.05
AC013401.1-202ENST00000422017 NPM3O75607 178 aaKnown RBP21.31■■□□□ 1
AC013401.1-202ENST00000422017 CACNB1Q02641 598 aaPredicted RBP21.19■□□□□ 0.98
AC013401.1-202ENST00000422017 RNF39Q9H2S5 420 aa21.16■□□□□ 0.98
AC013401.1-202ENST00000422017 KCNA4P22459 653 aa21.06■□□□□ 0.96
AC013401.1-202ENST00000422017 DNAJC5BQ9UF47 199 aa21.02■□□□□ 0.96
AC013401.1-202ENST00000422017 C1QBPQ07021 282 aaKnown RBP20.84■□□□□ 0.93
AC013401.1-202ENST00000422017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.84■□□□□ 0.93
AC013401.1-202ENST00000422017 U3KPZ7 1027 aaPredicted RBP20.41■□□□□ 0.86
AC013401.1-202ENST00000422017 SLC4A2P04920 1241 aa20.32■□□□□ 0.84
AC013401.1-202ENST00000422017 SPINK5Q9NQ38 1064 aaPredicted RBP20.09■□□□□ 0.81
AC013401.1-202ENST00000422017 CAPN15O75808 1086 aa20.04■□□□□ 0.8
AC013401.1-202ENST00000422017 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
AC013401.1-202ENST00000422017 DSG3P32926 999 aa19.87■□□□□ 0.77
AC013401.1-202ENST00000422017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.85■□□□□ 0.77
AC013401.1-202ENST00000422017 HNRNPUL2Q1KMD3 747 aaKnown RBP19.85■□□□□ 0.77
AC013401.1-202ENST00000422017 APLP2Q06481 763 aa19.82■□□□□ 0.76
AC013401.1-202ENST00000422017 TRHP20396 242 aaPredicted RBP19.77■□□□□ 0.76
AC013401.1-202ENST00000422017 SAMD1Q6SPF0 538 aaPredicted RBP19.75■□□□□ 0.75
AC013401.1-202ENST00000422017 MYCNP04198 464 aaPredicted RBP19.69■□□□□ 0.74
AC013401.1-202ENST00000422017 ZNF219Q9P2Y4 722 aaPredicted RBP19.69■□□□□ 0.74
AC013401.1-202ENST00000422017 ABCB7O75027 752 aa19.61■□□□□ 0.73
AC013401.1-202ENST00000422017 FOXD4L1Q9NU39 408 aa19.57■□□□□ 0.72
AC013401.1-202ENST00000422017 ZBTB22O15209 634 aa19.37■□□□□ 0.69
AC013401.1-202ENST00000422017 POLA2Q14181 598 aa19.27■□□□□ 0.68
AC013401.1-202ENST00000422017 ATF5Q9Y2D1 282 aaPredicted RBP19.27■□□□□ 0.68
AC013401.1-202ENST00000422017 ATXN8OSP0DMR3 200 aa18.94■□□□□ 0.62
AC013401.1-202ENST00000422017 RBM42Q9BTD8 480 aaKnown RBP18.93■□□□□ 0.62
AC013401.1-202ENST00000422017 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
AC013401.1-202ENST00000422017 POTEHQ6S545 545 aa18.78■□□□□ 0.6
AC013401.1-202ENST00000422017 OSCARQ8IYS5 282 aa18.63■□□□□ 0.57
AC013401.1-202ENST00000422017 CSRNP3Q8WYN3 585 aa18.61■□□□□ 0.57
AC013401.1-202ENST00000422017 AKT1S1Q96B36 256 aa18.54■□□□□ 0.56
AC013401.1-202ENST00000422017 CHRDL2Q6WN34 429 aa18.48■□□□□ 0.55
AC013401.1-202ENST00000422017 FBLN2P98095 1184 aa18.47■□□□□ 0.55
AC013401.1-202ENST00000422017 EHMT2Q96KQ7 1210 aa18.47■□□□□ 0.55
AC013401.1-202ENST00000422017 REM2Q8IYK8 340 aaPredicted RBP18.39■□□□□ 0.53
AC013401.1-202ENST00000422017 MKRN4PQ13434 485 aaPredicted RBP18.38■□□□□ 0.53
AC013401.1-202ENST00000422017 SPDYE2BA6NHP3 402 aa18.28■□□□□ 0.52
AC013401.1-202ENST00000422017 SPDYE6P0CI01 402 aa18.28■□□□□ 0.52
AC013401.1-202ENST00000422017 SPDYE2Q495Y8 402 aa18.28■□□□□ 0.52
AC013401.1-202ENST00000422017 PITPNM1O00562 1244 aa18.19■□□□□ 0.5
AC013401.1-202ENST00000422017 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
AC013401.1-202ENST00000422017 PIP4P2Q8N4L2 257 aa18.09■□□□□ 0.49
AC013401.1-202ENST00000422017 SSUH2Q9Y2M2 353 aa18.06■□□□□ 0.48
AC013401.1-202ENST00000422017 FXR2P51116 673 aaKnown RBP eCLIP17.99■□□□□ 0.47
AC013401.1-202ENST00000422017 SPDYE1Q8NFV5 336 aaPredicted RBP17.93■□□□□ 0.46
AC013401.1-202ENST00000422017 CLEC11AQ9Y240 323 aa17.93■□□□□ 0.46
AC013401.1-202ENST00000422017 PABPN1Q86U42 306 aaKnown RBP eCLIP17.86■□□□□ 0.45
AC013401.1-202ENST00000422017 HAX1O00165 279 aa17.73■□□□□ 0.43
AC013401.1-202ENST00000422017 PRKAR2AP13861 404 aaKnown RBP17.72■□□□□ 0.43
AC013401.1-202ENST00000422017 SP7Q8TDD2 431 aaPredicted RBP17.67■□□□□ 0.42
AC013401.1-202ENST00000422017 PRR29P0C7W0 189 aa17.64■□□□□ 0.41
AC013401.1-202ENST00000422017 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.4
AC013401.1-202ENST00000422017 CHADLQ6NUI6 762 aa17.58■□□□□ 0.4
AC013401.1-202ENST00000422017 EVX2Q03828 476 aa17.53■□□□□ 0.4
AC013401.1-202ENST00000422017 C19orf67A6NJJ6 358 aa17.41■□□□□ 0.38
AC013401.1-202ENST00000422017 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
AC013401.1-202ENST00000422017 FARP1Q9Y4F1 1045 aaPredicted RBP17.31■□□□□ 0.36
AC013401.1-202ENST00000422017 CREBZFQ9NS37 354 aa17.24■□□□□ 0.35
AC013401.1-202ENST00000422017 CD44P16070 742 aaKnown RBP17.17■□□□□ 0.34
AC013401.1-202ENST00000422017 PROM2Q8N271 834 aa17.16■□□□□ 0.34
AC013401.1-202ENST00000422017 GABBR2O75899 941 aa17.13■□□□□ 0.33
AC013401.1-202ENST00000422017 MNX1P50219 401 aaPredicted RBP16.97■□□□□ 0.31
AC013401.1-202ENST00000422017 ZRANB1Q9UGI0 708 aa16.96■□□□□ 0.31
AC013401.1-202ENST00000422017 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
AC013401.1-202ENST00000422017 ZNF579Q8NAF0 562 aaKnown RBP16.89■□□□□ 0.29
AC013401.1-202ENST00000422017 FKBP8Q14318 412 aa16.87■□□□□ 0.29
AC013401.1-202ENST00000422017 CLCN6P51797 869 aa16.86■□□□□ 0.29
AC013401.1-202ENST00000422017 PAK3O75914 559 aaPredicted RBP16.83■□□□□ 0.28
AC013401.1-202ENST00000422017 POTEIP0CG38 1075 aa16.77■□□□□ 0.28
AC013401.1-202ENST00000422017 MIER1Q8N108 512 aa16.77■□□□□ 0.28
AC013401.1-202ENST00000422017 PHF12Q96QT6 1004 aa16.75■□□□□ 0.27
AC013401.1-202ENST00000422017 GALR2O43603 387 aaPredicted RBP16.7■□□□□ 0.26
AC013401.1-202ENST00000422017 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
AC013401.1-202ENST00000422017 DCBLD2Q96PD2 775 aa16.7■□□□□ 0.26
AC013401.1-202ENST00000422017 PLCD3Q8N3E9 789 aa16.65■□□□□ 0.26
AC013401.1-202ENST00000422017 TSPYL2Q9H2G4 693 aaPredicted RBP16.64■□□□□ 0.25
AC013401.1-202ENST00000422017 LHX8Q68G74 356 aa16.59■□□□□ 0.25
AC013401.1-202ENST00000422017 CCDC61Q9Y6R9 512 aa16.54■□□□□ 0.24
AC013401.1-202ENST00000422017 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms