RNA–Protein interactions for RNA: ENST00000421421.1

GAPDHP49-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 49, humanhuman

BASIC

Gene GAPDHP49, Length 961 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP49-201ENST00000421421 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.09
GAPDHP49-201ENST00000421421 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
GAPDHP49-201ENST00000421421 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
GAPDHP49-201ENST00000421421 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
GAPDHP49-201ENST00000421421 FOXD1Q16676 465 aa17.54■□□□□ 0.4
GAPDHP49-201ENST00000421421 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
GAPDHP49-201ENST00000421421 MSH5O43196 834 aa16.65■□□□□ 0.26
GAPDHP49-201ENST00000421421 PIAS4Q8N2W9 510 aaPredicted RBP16.32■□□□□ 0.2
GAPDHP49-201ENST00000421421 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
GAPDHP49-201ENST00000421421 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
GAPDHP49-201ENST00000421421 ADRA2BP18089 450 aa15.99■□□□□ 0.15
GAPDHP49-201ENST00000421421 DMRT2Q9Y5R5 561 aa14.84□□□□□ -0.03
GAPDHP49-201ENST00000421421 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
GAPDHP49-201ENST00000421421 SCAF1Q9H7N4 1312 aaKnown RBP14.71□□□□□ -0.05
GAPDHP49-201ENST00000421421 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
GAPDHP49-201ENST00000421421 DCAF8L1A6NGE4 600 aa14.25□□□□□ -0.13
GAPDHP49-201ENST00000421421 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
GAPDHP49-201ENST00000421421 RNF39Q9H2S5 420 aa14.13□□□□□ -0.15
GAPDHP49-201ENST00000421421 PPP4R3CPQ6ZMV5 832 aa14.07□□□□□ -0.16
GAPDHP49-201ENST00000421421 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
GAPDHP49-201ENST00000421421 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
GAPDHP49-201ENST00000421421 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
GAPDHP49-201ENST00000421421 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
GAPDHP49-201ENST00000421421 KCNA4P22459 653 aa13.49□□□□□ -0.25
GAPDHP49-201ENST00000421421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.25
GAPDHP49-201ENST00000421421 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
GAPDHP49-201ENST00000421421 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
GAPDHP49-201ENST00000421421 POTEHQ6S545 545 aa13.19□□□□□ -0.3
GAPDHP49-201ENST00000421421 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
GAPDHP49-201ENST00000421421 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
GAPDHP49-201ENST00000421421 DSG3P32926 999 aa13.08□□□□□ -0.32
GAPDHP49-201ENST00000421421 CAPN15O75808 1086 aa13.06□□□□□ -0.32
GAPDHP49-201ENST00000421421 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
GAPDHP49-201ENST00000421421 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
GAPDHP49-201ENST00000421421 APLP2Q06481 763 aa12.79□□□□□ -0.36
GAPDHP49-201ENST00000421421 CSRNP3Q8WYN3 585 aa12.79□□□□□ -0.36
GAPDHP49-201ENST00000421421 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
GAPDHP49-201ENST00000421421 TRHP20396 242 aaPredicted RBP12.74□□□□□ -0.37
GAPDHP49-201ENST00000421421 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
GAPDHP49-201ENST00000421421 ABCB7O75027 752 aa12.69□□□□□ -0.38
GAPDHP49-201ENST00000421421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
GAPDHP49-201ENST00000421421 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
GAPDHP49-201ENST00000421421 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
GAPDHP49-201ENST00000421421 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
GAPDHP49-201ENST00000421421 ZBTB22O15209 634 aa12.42□□□□□ -0.42
GAPDHP49-201ENST00000421421 CHRDL2Q6WN34 429 aa12.41□□□□□ -0.42
GAPDHP49-201ENST00000421421 POLA2Q14181 598 aa12.3□□□□□ -0.44
GAPDHP49-201ENST00000421421 MYCNP04198 464 aaPredicted RBP12.26□□□□□ -0.45
GAPDHP49-201ENST00000421421 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
GAPDHP49-201ENST00000421421 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
GAPDHP49-201ENST00000421421 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
GAPDHP49-201ENST00000421421 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
GAPDHP49-201ENST00000421421 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
GAPDHP49-201ENST00000421421 PIP4P2Q8N4L2 257 aa11.99□□□□□ -0.49
GAPDHP49-201ENST00000421421 ATF5Q9Y2D1 282 aaPredicted RBP11.94□□□□□ -0.5
GAPDHP49-201ENST00000421421 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
GAPDHP49-201ENST00000421421 HAX1O00165 279 aa11.91□□□□□ -0.5
GAPDHP49-201ENST00000421421 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
GAPDHP49-201ENST00000421421 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.51
GAPDHP49-201ENST00000421421 ATXN8OSP0DMR3 200 aa11.77□□□□□ -0.53
GAPDHP49-201ENST00000421421 EVX2Q03828 476 aa11.68□□□□□ -0.54
GAPDHP49-201ENST00000421421 SPDYE2BA6NHP3 402 aa11.65□□□□□ -0.54
GAPDHP49-201ENST00000421421 SPDYE6P0CI01 402 aa11.65□□□□□ -0.54
GAPDHP49-201ENST00000421421 SPDYE2Q495Y8 402 aa11.65□□□□□ -0.54
GAPDHP49-201ENST00000421421 FBLN2P98095 1184 aa11.59□□□□□ -0.55
GAPDHP49-201ENST00000421421 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
GAPDHP49-201ENST00000421421 SPDYE1Q8NFV5 336 aaPredicted RBP11.56□□□□□ -0.56
GAPDHP49-201ENST00000421421 FKBP8Q14318 412 aa11.53□□□□□ -0.56
GAPDHP49-201ENST00000421421 CLEC11AQ9Y240 323 aa11.52□□□□□ -0.57
GAPDHP49-201ENST00000421421 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
GAPDHP49-201ENST00000421421 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
GAPDHP49-201ENST00000421421 GABBR2O75899 941 aa11.43□□□□□ -0.58
GAPDHP49-201ENST00000421421 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
GAPDHP49-201ENST00000421421 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
GAPDHP49-201ENST00000421421 SSUH2Q9Y2M2 353 aa11.42□□□□□ -0.58
GAPDHP49-201ENST00000421421 LHX8Q68G74 356 aa11.41□□□□□ -0.58
GAPDHP49-201ENST00000421421 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
GAPDHP49-201ENST00000421421 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
GAPDHP49-201ENST00000421421 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
GAPDHP49-201ENST00000421421 PRR29P0C7W0 189 aa11.29□□□□□ -0.6
GAPDHP49-201ENST00000421421 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
GAPDHP49-201ENST00000421421 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
GAPDHP49-201ENST00000421421 CLCN6P51797 869 aa11.2□□□□□ -0.62
GAPDHP49-201ENST00000421421 CD44P16070 742 aaKnown RBP11.19□□□□□ -0.62
GAPDHP49-201ENST00000421421 POTEIP0CG38 1075 aa11.16□□□□□ -0.62
GAPDHP49-201ENST00000421421 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
GAPDHP49-201ENST00000421421 DCBLD2Q96PD2 775 aa11.06□□□□□ -0.64
GAPDHP49-201ENST00000421421 SPDYE4A6NLX3 237 aa11.01□□□□□ -0.65
GAPDHP49-201ENST00000421421 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
GAPDHP49-201ENST00000421421 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
GAPDHP49-201ENST00000421421 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.65
GAPDHP49-201ENST00000421421 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
GAPDHP49-201ENST00000421421 PROM2Q8N271 834 aa10.89□□□□□ -0.67
GAPDHP49-201ENST00000421421 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
GAPDHP49-201ENST00000421421 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
GAPDHP49-201ENST00000421421 GALR2O43603 387 aaPredicted RBP10.87□□□□□ -0.67
GAPDHP49-201ENST00000421421 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
GAPDHP49-201ENST00000421421 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.68
GAPDHP49-201ENST00000421421 VASPP50552 380 aaPredicted RBP10.81□□□□□ -0.68
GAPDHP49-201ENST00000421421 POTEB2H3BUK9 544 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms