RNA–Protein interactions for RNA: ENST00000421296.1

IFRD1-204, Transcript of interferon related developmental regulator 1, humanhuman

TSL 2

Gene IFRD1, Length 1,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-204ENST00000421296 AEBP2Q6ZN18 517 aaPredicted RBP39.03■■■■□ 3.84
IFRD1-204ENST00000421296 CHIC1Q5VXU3 224 aa38.07■■■■□ 3.68
IFRD1-204ENST00000421296 PHF23Q9BUL5 403 aaPredicted RBP33.5■■■□□ 2.95
IFRD1-204ENST00000421296 SENP3Q9H4L4 574 aaPredicted RBP33.09■■■□□ 2.89
IFRD1-204ENST00000421296 PLPPR3Q6T4P5 718 aa30.91■■■□□ 2.54
IFRD1-204ENST00000421296 FOXD1Q16676 465 aa30.74■■■□□ 2.51
IFRD1-204ENST00000421296 PPP6R1Q9UPN7 881 aa29.59■■■□□ 2.33
IFRD1-204ENST00000421296 ADRA2BP18089 450 aa29.57■■■□□ 2.32
IFRD1-204ENST00000421296 PIAS4Q8N2W9 510 aaPredicted RBP28.98■■■□□ 2.23
IFRD1-204ENST00000421296 MSH5O43196 834 aa28.33■■■□□ 2.13
IFRD1-204ENST00000421296 PPP4R3CPQ6ZMV5 832 aa27.25■■□□□ 1.95
IFRD1-204ENST00000421296 SCAF1Q9H7N4 1312 aaKnown RBP27.02■■□□□ 1.92
IFRD1-204ENST00000421296 MAPK8IP2Q13387 824 aaPredicted RBP26.85■■□□□ 1.89
IFRD1-204ENST00000421296 KCNA4P22459 653 aa26.6■■□□□ 1.85
IFRD1-204ENST00000421296 NCBP3Q53F19 620 aaKnown RBP26.52■■□□□ 1.84
IFRD1-204ENST00000421296 CNKSR2Q8WXI2 1034 aa26.48■■□□□ 1.83
IFRD1-204ENST00000421296 DMRT2Q9Y5R5 561 aa26.41■■□□□ 1.82
IFRD1-204ENST00000421296 NPM3O75607 178 aaKnown RBP26.13■■□□□ 1.77
IFRD1-204ENST00000421296 RNF216Q9NWF9 866 aaPredicted RBP25.96■■□□□ 1.75
IFRD1-204ENST00000421296 HOXD11P31277 338 aaPredicted RBP25.86■■□□□ 1.73
IFRD1-204ENST00000421296 POTEDQ86YR6 584 aa25.85■■□□□ 1.73
IFRD1-204ENST00000421296 DCAF8L1A6NGE4 600 aa25.33■■□□□ 1.65
IFRD1-204ENST00000421296 SLC4A1APQ9BWU0 796 aaKnown RBP25.33■■□□□ 1.65
IFRD1-204ENST00000421296 DNAJC5BQ9UF47 199 aa25.32■■□□□ 1.64
IFRD1-204ENST00000421296 SLC4A2P04920 1241 aa24.69■■□□□ 1.54
IFRD1-204ENST00000421296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.68■■□□□ 1.542e-9■■■■□ 21.9
IFRD1-204ENST00000421296 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
IFRD1-204ENST00000421296 ZBTB22O15209 634 aa24.47■■□□□ 1.51
IFRD1-204ENST00000421296 FOXD4L1Q9NU39 408 aa24.47■■□□□ 1.51
IFRD1-204ENST00000421296 CSRNP3Q8WYN3 585 aa24.33■■□□□ 1.49
IFRD1-204ENST00000421296 RNF39Q9H2S5 420 aa24.28■■□□□ 1.48
IFRD1-204ENST00000421296 U3KPZ7 1027 aaPredicted RBP24.26■■□□□ 1.47
IFRD1-204ENST00000421296 MYCNP04198 464 aaPredicted RBP24.13■■□□□ 1.45
IFRD1-204ENST00000421296 C1QBPQ07021 282 aaKnown RBP23.99■■□□□ 1.43
IFRD1-204ENST00000421296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.93■■□□□ 1.42
IFRD1-204ENST00000421296 HNRNPUL2Q1KMD3 747 aaKnown RBP23.93■■□□□ 1.42
IFRD1-204ENST00000421296 SAMD1Q6SPF0 538 aaPredicted RBP23.85■■□□□ 1.41
IFRD1-204ENST00000421296 CACNB1Q02641 598 aaPredicted RBP23.69■■□□□ 1.38
IFRD1-204ENST00000421296 APLP2Q06481 763 aa23.67■■□□□ 1.38
IFRD1-204ENST00000421296 SPINK5Q9NQ38 1064 aaPredicted RBP23.61■■□□□ 1.37
IFRD1-204ENST00000421296 ATXN8OSP0DMR3 200 aa23.6■■□□□ 1.37
IFRD1-204ENST00000421296 ATF5Q9Y2D1 282 aaPredicted RBP23.53■■□□□ 1.36
IFRD1-204ENST00000421296 CAPN15O75808 1086 aa23.52■■□□□ 1.36
IFRD1-204ENST00000421296 TRHP20396 242 aaPredicted RBP23.41■■□□□ 1.34
IFRD1-204ENST00000421296 ZNF219Q9P2Y4 722 aaPredicted RBP23.36■■□□□ 1.33
IFRD1-204ENST00000421296 DSG3P32926 999 aa23.11■■□□□ 1.29
IFRD1-204ENST00000421296 ABCB7O75027 752 aa23.07■■□□□ 1.28
IFRD1-204ENST00000421296 POLA2Q14181 598 aa23.02■■□□□ 1.28
IFRD1-204ENST00000421296 ZBTB12Q9Y330 459 aaPredicted RBP22.59■■□□□ 1.21
IFRD1-204ENST00000421296 FBLN2P98095 1184 aa22.53■■□□□ 1.2
IFRD1-204ENST00000421296 MKRN4PQ13434 485 aaPredicted RBP22.49■■□□□ 1.19
IFRD1-204ENST00000421296 OSCARQ8IYS5 282 aa22.23■■□□□ 1.15
IFRD1-204ENST00000421296 SPDYE2BA6NHP3 402 aa22■■□□□ 1.11
IFRD1-204ENST00000421296 SPDYE6P0CI01 402 aa22■■□□□ 1.11
IFRD1-204ENST00000421296 FKBP8Q14318 412 aa22■■□□□ 1.11
IFRD1-204ENST00000421296 SPDYE2Q495Y8 402 aa22■■□□□ 1.11
IFRD1-204ENST00000421296 RBM42Q9BTD8 480 aaKnown RBP22■■□□□ 1.11
IFRD1-204ENST00000421296 SPDYE4A6NLX3 237 aa21.99■■□□□ 1.11
IFRD1-204ENST00000421296 ZNF692Q9BU19 519 aaPredicted RBP21.94■■□□□ 1.1
IFRD1-204ENST00000421296 SSUH2Q9Y2M2 353 aa21.81■■□□□ 1.08
IFRD1-204ENST00000421296 AKT1S1Q96B36 256 aa21.74■■□□□ 1.07
IFRD1-204ENST00000421296 PABPN1Q86U42 306 aaKnown RBP eCLIP21.65■■□□□ 1.06
IFRD1-204ENST00000421296 PROM2Q8N271 834 aa21.57■■□□□ 1.04
IFRD1-204ENST00000421296 REM2Q8IYK8 340 aaPredicted RBP21.55■■□□□ 1.04
IFRD1-204ENST00000421296 SPDYE1Q8NFV5 336 aaPredicted RBP21.36■■□□□ 1.01
IFRD1-204ENST00000421296 CLEC11AQ9Y240 323 aa21.3■■□□□ 1
IFRD1-204ENST00000421296 PITPNM1O00562 1244 aa21.29■■□□□ 1
IFRD1-204ENST00000421296 STAG3Q9UJ98 1225 aa21.26■□□□□ 0.99
IFRD1-204ENST00000421296 FBXO3Q9UK99 471 aa21.19■□□□□ 0.98
IFRD1-204ENST00000421296 CHRDL2Q6WN34 429 aa21.12■□□□□ 0.97
IFRD1-204ENST00000421296 PRR29P0C7W0 189 aa21.1■□□□□ 0.97
IFRD1-204ENST00000421296 VASPP50552 380 aaPredicted RBP20.91■□□□□ 0.94
IFRD1-204ENST00000421296 FXR2P51116 673 aaKnown RBP eCLIP20.89■□□□□ 0.93
IFRD1-204ENST00000421296 MIER1Q8N108 512 aa20.87■□□□□ 0.93
IFRD1-204ENST00000421296 PIP4P2Q8N4L2 257 aa20.85■□□□□ 0.93
IFRD1-204ENST00000421296 PLCD3Q8N3E9 789 aa20.83■□□□□ 0.93
IFRD1-204ENST00000421296 CREBZFQ9NS37 354 aa20.81■□□□□ 0.92
IFRD1-204ENST00000421296 CHADLQ6NUI6 762 aa20.78■□□□□ 0.92
IFRD1-204ENST00000421296 PRKAR2AP13861 404 aaKnown RBP20.77■□□□□ 0.92
IFRD1-204ENST00000421296 PLEKHG5O94827 1062 aa20.74■□□□□ 0.91
IFRD1-204ENST00000421296 IFNLR1Q8IU57 520 aaPredicted RBP20.64■□□□□ 0.89
IFRD1-204ENST00000421296 KLHL34Q8N239 644 aa20.6■□□□□ 0.89
IFRD1-204ENST00000421296 MNX1P50219 401 aaPredicted RBP20.57■□□□□ 0.88
IFRD1-204ENST00000421296 FARP1Q9Y4F1 1045 aaPredicted RBP20.57■□□□□ 0.88
IFRD1-204ENST00000421296 ZBTB47Q9UFB7 747 aaPredicted RBP20.56■□□□□ 0.88
IFRD1-204ENST00000421296 POTEHQ6S545 545 aa20.48■□□□□ 0.87
IFRD1-204ENST00000421296 NPM1P06748 294 aaKnown RBP eCLIP20.46■□□□□ 0.87
IFRD1-204ENST00000421296 SPOCK2Q92563 424 aa20.39■□□□□ 0.85
IFRD1-204ENST00000421296 NUBP1P53384 320 aa20.31■□□□□ 0.84
IFRD1-204ENST00000421296 RASEFQ8IZ41 740 aa20.24■□□□□ 0.83
IFRD1-204ENST00000421296 HAX1O00165 279 aa20.21■□□□□ 0.83
IFRD1-204ENST00000421296 C19orf67A6NJJ6 358 aa20.18■□□□□ 0.82
IFRD1-204ENST00000421296 CD44P16070 742 aaKnown RBP20.17■□□□□ 0.82
IFRD1-204ENST00000421296 TSPYL2Q9H2G4 693 aaPredicted RBP20.16■□□□□ 0.82
IFRD1-204ENST00000421296 DCAF8Q5TAQ9 597 aa20.15■□□□□ 0.82
IFRD1-204ENST00000421296 FAM212AQ96EL1 285 aa20.15■□□□□ 0.82
IFRD1-204ENST00000421296 PAK3O75914 559 aaPredicted RBP20.11■□□□□ 0.81
IFRD1-204ENST00000421296 CIZ1Q9ULV3 898 aaPredicted RBP20.11■□□□□ 0.81
IFRD1-204ENST00000421296 GSE1Q14687 1217 aa20.07■□□□□ 0.8
IFRD1-204ENST00000421296 ZRANB1Q9UGI0 708 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms