RNA–Protein interactions for RNA: ENST00000421122.6

AC009299.3-201, humanhuman

TSL 3 BASIC

Gene AC009299.3, Length 1,072 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009299.3-201ENST00000421122 AEBP2Q6ZN18 517 aaPredicted RBP26.52■■□□□ 1.84
AC009299.3-201ENST00000421122 CHIC1Q5VXU3 224 aa24.99■■□□□ 1.59
AC009299.3-201ENST00000421122 SENP3Q9H4L4 574 aaPredicted RBP22.67■■□□□ 1.22
AC009299.3-201ENST00000421122 PHF23Q9BUL5 403 aaPredicted RBP22.35■■□□□ 1.17
AC009299.3-201ENST00000421122 FOXD1Q16676 465 aa21.15■□□□□ 0.98
AC009299.3-201ENST00000421122 POTEDQ86YR6 584 aa20.85■□□□□ 0.93
AC009299.3-201ENST00000421122 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
AC009299.3-201ENST00000421122 MSH5O43196 834 aa19.88■□□□□ 0.77
AC009299.3-201ENST00000421122 PIAS4Q8N2W9 510 aaPredicted RBP19.72■□□□□ 0.75
AC009299.3-201ENST00000421122 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
AC009299.3-201ENST00000421122 ADRA2BP18089 450 aa19.54■□□□□ 0.72
AC009299.3-201ENST00000421122 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
AC009299.3-201ENST00000421122 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
AC009299.3-201ENST00000421122 SCAF1Q9H7N4 1312 aaKnown RBP17.89■□□□□ 0.45
AC009299.3-201ENST00000421122 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
AC009299.3-201ENST00000421122 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
AC009299.3-201ENST00000421122 HOXD11P31277 338 aaPredicted RBP17.2■□□□□ 0.34
AC009299.3-201ENST00000421122 CACNB1Q02641 598 aaPredicted RBP17.2■□□□□ 0.34
AC009299.3-201ENST00000421122 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
AC009299.3-201ENST00000421122 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
AC009299.3-201ENST00000421122 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
AC009299.3-201ENST00000421122 RNF39Q9H2S5 420 aa16.94■□□□□ 0.3
AC009299.3-201ENST00000421122 KCNA4P22459 653 aa16.81■□□□□ 0.28
AC009299.3-201ENST00000421122 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
AC009299.3-201ENST00000421122 C1QBPQ07021 282 aaKnown RBP16.69■□□□□ 0.26
AC009299.3-201ENST00000421122 DNAJC5BQ9UF47 199 aa16.64■□□□□ 0.25
AC009299.3-201ENST00000421122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.22
AC009299.3-201ENST00000421122 POTEHQ6S545 545 aa16.08■□□□□ 0.16
AC009299.3-201ENST00000421122 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.16
AC009299.3-201ENST00000421122 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
AC009299.3-201ENST00000421122 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
AC009299.3-201ENST00000421122 CAPN15O75808 1086 aa15.84■□□□□ 0.13
AC009299.3-201ENST00000421122 SLC4A2P04920 1241 aa15.83■□□□□ 0.12
AC009299.3-201ENST00000421122 DSG3P32926 999 aa15.8■□□□□ 0.12
AC009299.3-201ENST00000421122 APLP2Q06481 763 aa15.57■□□□□ 0.08
AC009299.3-201ENST00000421122 FOXD4L1Q9NU39 408 aa15.57■□□□□ 0.08
AC009299.3-201ENST00000421122 TRHP20396 242 aaPredicted RBP15.55■□□□□ 0.08
AC009299.3-201ENST00000421122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
AC009299.3-201ENST00000421122 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
AC009299.3-201ENST00000421122 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
AC009299.3-201ENST00000421122 ZBTB22O15209 634 aa15.46■□□□□ 0.07
AC009299.3-201ENST00000421122 ABCB7O75027 752 aa15.46■□□□□ 0.07
AC009299.3-201ENST00000421122 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
AC009299.3-201ENST00000421122 SAMD1Q6SPF0 538 aaPredicted RBP15.39■□□□□ 0.05
AC009299.3-201ENST00000421122 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
AC009299.3-201ENST00000421122 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
AC009299.3-201ENST00000421122 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
AC009299.3-201ENST00000421122 POLA2Q14181 598 aa15.08■□□□□ 0
AC009299.3-201ENST00000421122 ATF5Q9Y2D1 282 aaPredicted RBP15.05■□□□□ -0
AC009299.3-201ENST00000421122 ATXN8OSP0DMR3 200 aa15.03■□□□□ -0
AC009299.3-201ENST00000421122 CHRDL2Q6WN34 429 aa14.83□□□□□ -0.04
AC009299.3-201ENST00000421122 ZBTB12Q9Y330 459 aaPredicted RBP14.75□□□□□ -0.05
AC009299.3-201ENST00000421122 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
AC009299.3-201ENST00000421122 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
AC009299.3-201ENST00000421122 REM2Q8IYK8 340 aaPredicted RBP14.55□□□□□ -0.08
AC009299.3-201ENST00000421122 FBLN2P98095 1184 aa14.46□□□□□ -0.09
AC009299.3-201ENST00000421122 SP7Q8TDD2 431 aaPredicted RBP14.45□□□□□ -0.1
AC009299.3-201ENST00000421122 PIP4P2Q8N4L2 257 aa14.43□□□□□ -0.1
AC009299.3-201ENST00000421122 PITPNM1O00562 1244 aa14.39□□□□□ -0.11
AC009299.3-201ENST00000421122 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
AC009299.3-201ENST00000421122 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.12
AC009299.3-201ENST00000421122 SPDYE2BA6NHP3 402 aa14.28□□□□□ -0.12
AC009299.3-201ENST00000421122 SPDYE6P0CI01 402 aa14.28□□□□□ -0.12
AC009299.3-201ENST00000421122 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
AC009299.3-201ENST00000421122 HAX1O00165 279 aa14.25□□□□□ -0.13
AC009299.3-201ENST00000421122 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
AC009299.3-201ENST00000421122 SPDYE1Q8NFV5 336 aaPredicted RBP14.08□□□□□ -0.16
AC009299.3-201ENST00000421122 CLEC11AQ9Y240 323 aa14.08□□□□□ -0.16
AC009299.3-201ENST00000421122 SSUH2Q9Y2M2 353 aa14.06□□□□□ -0.16
AC009299.3-201ENST00000421122 EVX2Q03828 476 aa14.04□□□□□ -0.16
AC009299.3-201ENST00000421122 PRKAR2AP13861 404 aaKnown RBP14.03□□□□□ -0.16
AC009299.3-201ENST00000421122 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.17
AC009299.3-201ENST00000421122 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
AC009299.3-201ENST00000421122 C19orf67A6NJJ6 358 aa13.86□□□□□ -0.19
AC009299.3-201ENST00000421122 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
AC009299.3-201ENST00000421122 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
AC009299.3-201ENST00000421122 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
AC009299.3-201ENST00000421122 FKBP8Q14318 412 aa13.75□□□□□ -0.21
AC009299.3-201ENST00000421122 GABBR2O75899 941 aa13.72□□□□□ -0.21
AC009299.3-201ENST00000421122 PROM2Q8N271 834 aa13.68□□□□□ -0.22
AC009299.3-201ENST00000421122 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
AC009299.3-201ENST00000421122 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
AC009299.3-201ENST00000421122 CD44P16070 742 aaKnown RBP13.57□□□□□ -0.24
AC009299.3-201ENST00000421122 LHX8Q68G74 356 aa13.53□□□□□ -0.24
AC009299.3-201ENST00000421122 CLCN6P51797 869 aa13.43□□□□□ -0.26
AC009299.3-201ENST00000421122 POTEIP0CG38 1075 aa13.42□□□□□ -0.26
AC009299.3-201ENST00000421122 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
AC009299.3-201ENST00000421122 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
AC009299.3-201ENST00000421122 ZNF579Q8NAF0 562 aaKnown RBP13.34□□□□□ -0.27
AC009299.3-201ENST00000421122 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
AC009299.3-201ENST00000421122 DCBLD2Q96PD2 775 aa13.32□□□□□ -0.28
AC009299.3-201ENST00000421122 MIER1Q8N108 512 aa13.27□□□□□ -0.29
AC009299.3-201ENST00000421122 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
AC009299.3-201ENST00000421122 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
AC009299.3-201ENST00000421122 GALR2O43603 387 aaPredicted RBP13.21□□□□□ -0.29
AC009299.3-201ENST00000421122 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
AC009299.3-201ENST00000421122 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
AC009299.3-201ENST00000421122 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
AC009299.3-201ENST00000421122 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
AC009299.3-201ENST00000421122 PHF12Q96QT6 1004 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms